RNA–Protein interactions for RNA: ENST00000504701.5

CDC42SE2-207, Transcript of CDC42 small effector 2, humanhuman

TSL 4

Gene CDC42SE2, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-207ENST00000504701 HSPA1LP34931 641 aa34.6■■■■□ 3.13
CDC42SE2-207ENST00000504701 ZFYVE9O95405 1425 aa34.59■■■■□ 3.13
CDC42SE2-207ENST00000504701 ILDR2Q71H61 639 aa34.55■■■■□ 3.12
CDC42SE2-207ENST00000504701 RIMS2Q9UQ26 1411 aa34.55■■■■□ 3.12
CDC42SE2-207ENST00000504701 CHGAP10645 457 aaKnown RBP34.53■■■■□ 3.12
CDC42SE2-207ENST00000504701 NUTM2DQ5VT03 806 aaPredicted RBP34.49■■■■□ 3.11
CDC42SE2-207ENST00000504701 RBM33Q96EV2 1170 aaKnown RBP34.49■■■■□ 3.11
CDC42SE2-207ENST00000504701 NAIPQ13075 1403 aa34.48■■■■□ 3.11
CDC42SE2-207ENST00000504701 BCANQ96GW7 911 aa34.48■■■■□ 3.11
CDC42SE2-207ENST00000504701 SPHKAPQ2M3C7 1700 aa34.47■■■■□ 3.11
CDC42SE2-207ENST00000504701 NWD1Q149M9 1564 aa34.46■■■■□ 3.11
CDC42SE2-207ENST00000504701 KCNA6P17658 529 aa34.45■■■■□ 3.11
CDC42SE2-207ENST00000504701 PLEKHG1Q9ULL1 1385 aa34.45■■■■□ 3.11
CDC42SE2-207ENST00000504701 TMEM94Q12767 1356 aa34.44■■■■□ 3.1
CDC42SE2-207ENST00000504701 PPP1R15AO75807 674 aaPredicted RBP34.43■■■■□ 3.1
CDC42SE2-207ENST00000504701 CHD2O14647 1828 aaKnown RBP34.39■■■■□ 3.1
CDC42SE2-207ENST00000504701 PROSER2Q86WR7 435 aaPredicted RBP34.37■■■■□ 3.09
CDC42SE2-207ENST00000504701 ADAMTS13Q76LX8 1427 aa34.36■■■■□ 3.09
CDC42SE2-207ENST00000504701 MED1Q15648 1581 aaPredicted RBP34.36■■■■□ 3.09
CDC42SE2-207ENST00000504701 NKTRP30414 1462 aaKnown RBP34.35■■■■□ 3.09
CDC42SE2-207ENST00000504701 CLTCL1P53675 1640 aa34.34■■■■□ 3.09
CDC42SE2-207ENST00000504701 HFM1A2PYH4 1435 aa34.31■■■■□ 3.08
CDC42SE2-207ENST00000504701 ABCF1Q8NE71 845 aaKnown RBP eCLIP34.31■■■■□ 3.08
CDC42SE2-207ENST00000504701 HDGFP51858 240 aaKnown RBP34.3■■■■□ 3.08
CDC42SE2-207ENST00000504701 TBX22Q9Y458 520 aa34.27■■■■□ 3.08
CDC42SE2-207ENST00000504701 NRXN3Q9Y4C0 1643 aa34.26■■■■□ 3.08
CDC42SE2-207ENST00000504701 TRPM2O94759 1503 aa34.26■■■■□ 3.08
CDC42SE2-207ENST00000504701 DIP2AQ14689 1571 aa34.24■■■■□ 3.07
CDC42SE2-207ENST00000504701 TRIM52Q96A61 297 aa34.24■■■■□ 3.07
CDC42SE2-207ENST00000504701 ROBO1Q9Y6N7 1651 aa34.23■■■■□ 3.07
CDC42SE2-207ENST00000504701 PTPRUQ92729 1446 aa34.21■■■■□ 3.07
CDC42SE2-207ENST00000504701 ZNF326Q5BKZ1 582 aaKnown RBP34.2■■■■□ 3.07
CDC42SE2-207ENST00000504701 FAM135BQ49AJ0 1406 aa34.19■■■■□ 3.06
CDC42SE2-207ENST00000504701 NEXMIFQ5QGS0 1516 aa34.19■■■■□ 3.06
CDC42SE2-207ENST00000504701 KIF1BO60333 1816 aa34.18■■■■□ 3.06
CDC42SE2-207ENST00000504701 MSH6P52701 1360 aa34.17■■■■□ 3.06
CDC42SE2-207ENST00000504701 SETBP1Q9Y6X0 1596 aa34.15■■■■□ 3.06
CDC42SE2-207ENST00000504701 SLC4A1APQ9BWU0 796 aaKnown RBP34.12■■■■□ 3.05
CDC42SE2-207ENST00000504701 PIK3R4Q99570 1358 aa34.11■■■■□ 3.05
CDC42SE2-207ENST00000504701 FOXD1Q16676 465 aa34.11■■■■□ 3.05
CDC42SE2-207ENST00000504701 SOCS7O14512 581 aa34.1■■■■□ 3.05
CDC42SE2-207ENST00000504701 AMOTL2Q9Y2J4 779 aa34.1■■■■□ 3.05
CDC42SE2-207ENST00000504701 XRN1Q8IZH2 1706 aaKnown RBP34.1■■■■□ 3.05
CDC42SE2-207ENST00000504701 SIPA1L2Q9P2F8 1722 aaPredicted RBP34.1■■■■□ 3.05
CDC42SE2-207ENST00000504701 METP08581 1390 aa34.08■■■■□ 3.05
CDC42SE2-207ENST00000504701 SLAIN2Q9P270 581 aa34.06■■■■□ 3.04
CDC42SE2-207ENST00000504701 C14orf37Q86TY3 774 aa34.05■■■■□ 3.04
CDC42SE2-207ENST00000504701 NCOA3Q9Y6Q9 1424 aa34.02■■■■□ 3.04
CDC42SE2-207ENST00000504701 PHLPP1O60346 1717 aa34.01■■■■□ 3.04
CDC42SE2-207ENST00000504701 SETD1AO15047 1707 aaKnown RBP33.99■■■■□ 3.03
CDC42SE2-207ENST00000504701 PHF23Q9BUL5 403 aaPredicted RBP33.99■■■■□ 3.03
CDC42SE2-207ENST00000504701 PPLO60437 1756 aa33.97■■■■□ 3.03
CDC42SE2-207ENST00000504701 C19orf44Q9H6X5 657 aa33.95■■■■□ 3.03
CDC42SE2-207ENST00000504701 COL16A1Q07092 1604 aaPredicted RBP33.93■■■■□ 3.02
CDC42SE2-207ENST00000504701 MPHOSPH9Q99550 1183 aa33.91■■■■□ 3.02
CDC42SE2-207ENST00000504701 ATF3P18847 181 aa33.9■■■■□ 3.02
CDC42SE2-207ENST00000504701 CADPS2Q86UW7 1296 aa33.9■■■■□ 3.02
CDC42SE2-207ENST00000504701 RGS17Q9UGC6 210 aaPredicted RBP33.9■■■■□ 3.02
CDC42SE2-207ENST00000504701 NALCNQ8IZF0 1738 aa33.9■■■■□ 3.02
CDC42SE2-207ENST00000504701 VGFO15240 615 aaPredicted RBP33.85■■■■□ 3.01
CDC42SE2-207ENST00000504701 CCDC144AA2RUR9 1427 aa33.84■■■■□ 3.01
CDC42SE2-207ENST00000504701 AHDC1Q5TGY3 1603 aaPredicted RBP33.83■■■■□ 3.01
CDC42SE2-207ENST00000504701 SETD5Q9C0A6 1442 aa33.83■■■■□ 3.01
CDC42SE2-207ENST00000504701 RPGRIP1LQ68CZ1 1315 aa33.82■■■■□ 3.01
CDC42SE2-207ENST00000504701 IFT172Q9UG01 1749 aa33.82■■■■□ 3
CDC42SE2-207ENST00000504701 DCCP43146 1447 aa33.81■■■■□ 3
CDC42SE2-207ENST00000504701 MST1RQ04912 1400 aa33.81■■■■□ 3
CDC42SE2-207ENST00000504701 SPATA31E1Q6ZUB1 1445 aa33.81■■■■□ 3
CDC42SE2-207ENST00000504701 RGL3Q3MIN7 710 aa33.81■■■■□ 3
CDC42SE2-207ENST00000504701 BRINP3Q76B58 766 aa33.81■■■■□ 3
CDC42SE2-207ENST00000504701 ADGRL3Q9HAR2 1447 aa33.8■■■■□ 3
CDC42SE2-207ENST00000504701 ADGRF5Q8IZF2 1346 aa33.79■■■■□ 3
CDC42SE2-207ENST00000504701 ROBO2Q9HCK4 1378 aa33.79■■■■□ 3
CDC42SE2-207ENST00000504701 JCADQ9P266 1359 aa33.78■■■■□ 3
CDC42SE2-207ENST00000504701 ASXL1Q8IXJ9 1541 aa33.77■■■■□ 3
CDC42SE2-207ENST00000504701 RAB3GAP2Q9H2M9 1393 aa33.75■■■□□ 2.99
CDC42SE2-207ENST00000504701 PTCH1Q13635 1447 aa33.75■■■□□ 2.99
CDC42SE2-207ENST00000504701 LRP6O75581 1613 aa33.73■■■□□ 2.99
CDC42SE2-207ENST00000504701 NHSL1Q5SYE7 1610 aa33.71■■■□□ 2.99
CDC42SE2-207ENST00000504701 POTEAQ6S8J7 498 aa33.7■■■□□ 2.99
CDC42SE2-207ENST00000504701 DDX17Q92841 729 aaKnown RBP33.7■■■□□ 2.99
CDC42SE2-207ENST00000504701 SHPRHQ149N8 1683 aa33.7■■■□□ 2.99
CDC42SE2-207ENST00000504701 PRAG1Q86YV5 1406 aa33.68■■■□□ 2.98
CDC42SE2-207ENST00000504701 C1orf167Q5SNV9 1468 aa33.63■■■□□ 2.97
CDC42SE2-207ENST00000504701 ANKRD30BQ9BXX2 1392 aa33.62■■■□□ 2.97
CDC42SE2-207ENST00000504701 PIK3C2GO75747 1445 aa33.62■■■□□ 2.97
CDC42SE2-207ENST00000504701 TMEM132EQ6IEE7 984 aa33.6■■■□□ 2.97
CDC42SE2-207ENST00000504701 STK26Q9P289 416 aa33.6■■■□□ 2.97
CDC42SE2-207ENST00000504701 SPATA31A6Q5VVP1 1343 aa33.58■■■□□ 2.97
CDC42SE2-207ENST00000504701 ORAI2Q96SN7 254 aa33.56■■■□□ 2.96
CDC42SE2-207ENST00000504701 WAPLQ7Z5K2 1190 aa33.55■■■□□ 2.96
CDC42SE2-207ENST00000504701 KNDC1Q76NI1 1749 aa33.55■■■□□ 2.96
CDC42SE2-207ENST00000504701 NUTM2BA6NNL0 878 aaPredicted RBP33.54■■■□□ 2.96
CDC42SE2-207ENST00000504701 NUTM2EB1AL46 878 aaPredicted RBP33.54■■■□□ 2.96
CDC42SE2-207ENST00000504701 NUTM2AQ8IVF1 878 aaPredicted RBP33.54■■■□□ 2.96
CDC42SE2-207ENST00000504701 PLEKHH1Q9ULM0 1364 aa33.54■■■□□ 2.96
CDC42SE2-207ENST00000504701 LRPPRCP42704 1394 aaKnown RBP33.53■■■□□ 2.96
CDC42SE2-207ENST00000504701 TECPR2O15040 1411 aa33.53■■■□□ 2.96
CDC42SE2-207ENST00000504701 MEX3CQ5U5Q3 659 aaKnown RBP33.51■■■□□ 2.95
CDC42SE2-207ENST00000504701 CDC42BPGQ6DT37 1551 aa33.51■■■□□ 2.95
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms