RNA–Protein interactions for RNA: ENST00000504409.3

LINC02397-201, Transcript of long intergenic non-protein coding RNA 2397, humanhuman

TSL 1 (best) BASIC

Gene LINC02397, Length 10,626 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02397-201ENST00000504409 ZNF622Q969S3 477 aaKnown RBP eCLIP7.39□□□□□ -1.23
LINC02397-201ENST00000504409 RTN4Q9NQC3 1192 aaKnown RBP7.39□□□□□ -1.23
LINC02397-201ENST00000504409 MICALCLQ6ZW33 695 aa7.39□□□□□ -1.23
LINC02397-201ENST00000504409 JAKMIP3Q5VZ66 844 aa7.39□□□□□ -1.23
LINC02397-201ENST00000504409 CHMP3Q9Y3E7 222 aa7.39□□□□□ -1.23
LINC02397-201ENST00000504409 PRPF40AO75400 957 aaKnown RBP7.39□□□□□ -1.23
LINC02397-201ENST00000504409 TTLL5Q6EMB2 1281 aa7.39□□□□□ -1.23
LINC02397-201ENST00000504409 GABPB1Q06547 395 aaPredicted RBP7.39□□□□□ -1.23
LINC02397-201ENST00000504409 NFKBIBQ15653 356 aa7.38□□□□□ -1.23
LINC02397-201ENST00000504409 DHX57Q6P158 1386 aaKnown RBP7.38□□□□□ -1.23
LINC02397-201ENST00000504409 GOLGA6L9A6NEM1 432 aa7.38□□□□□ -1.23
LINC02397-201ENST00000504409 CCDC91Q7Z6B0 441 aa7.38□□□□□ -1.23
LINC02397-201ENST00000504409 PAXBP1Q9Y5B6 917 aa7.38□□□□□ -1.23
LINC02397-201ENST00000504409 POLR1AO95602 1720 aaPredicted RBP7.37□□□□□ -1.23
LINC02397-201ENST00000504409 CUX2O14529 1486 aa7.37□□□□□ -1.23
LINC02397-201ENST00000504409 GOLGA6L19H0YKK7 550 aa7.37□□□□□ -1.23
LINC02397-201ENST00000504409 RRP1P56182 461 aaKnown RBP7.37□□□□□ -1.23
LINC02397-201ENST00000504409 CAMSAP2Q08AD1 1489 aa7.37□□□□□ -1.23
LINC02397-201ENST00000504409 PIP4K2AP48426 406 aaPredicted RBP7.37□□□□□ -1.23
LINC02397-201ENST00000504409 AKAP17AQ02040 695 aaKnown RBP7.37□□□□□ -1.23
LINC02397-201ENST00000504409 CCDC88BA6NC98 1476 aa7.37□□□□□ -1.23
LINC02397-201ENST00000504409 ABCC8Q09428 1581 aa7.37□□□□□ -1.23
LINC02397-201ENST00000504409 CEP120Q8N960 986 aa7.37□□□□□ -1.23
LINC02397-201ENST00000504409 CCDC38Q502W7 563 aa7.37□□□□□ -1.23
LINC02397-201ENST00000504409 GPATCH3Q96I76 525 aa7.37□□□□□ -1.23
LINC02397-201ENST00000504409 FYCO1Q9BQS8 1478 aa7.36□□□□□ -1.23
LINC02397-201ENST00000504409 TMF1P82094 1093 aa7.36□□□□□ -1.23
LINC02397-201ENST00000504409 E9PSI1 815 aa7.36□□□□□ -1.23
LINC02397-201ENST00000504409 KIAA1211Q6ZU35 1233 aa7.36□□□□□ -1.23
LINC02397-201ENST00000504409 MIPOL1Q8TD10 442 aa7.36□□□□□ -1.23
LINC02397-201ENST00000504409 KIAA0754O94854 1291 aa7.36□□□□□ -1.23
LINC02397-201ENST00000504409 MFAP1P55081 439 aaKnown RBP7.36□□□□□ -1.23
LINC02397-201ENST00000504409 DNAAF4Q8WXU2 420 aa7.36□□□□□ -1.23
LINC02397-201ENST00000504409 HIRIP3Q9BW71 556 aaPredicted RBP7.36□□□□□ -1.23
LINC02397-201ENST00000504409 FAM13BQ9NYF5 915 aa7.36□□□□□ -1.23
LINC02397-201ENST00000504409 LMOD3Q0VAK6 560 aa7.35□□□□□ -1.23
LINC02397-201ENST00000504409 MAP9Q49MG5 647 aa7.35□□□□□ -1.23
LINC02397-201ENST00000504409 CCDC50Q8IVM0 306 aa7.35□□□□□ -1.23
LINC02397-201ENST00000504409 ANKRD20A12PQ8NF67 263 aa7.35□□□□□ -1.23
LINC02397-201ENST00000504409 SRRTQ9BXP5 876 aaKnown RBP7.35□□□□□ -1.23
LINC02397-201ENST00000504409 ZNF428Q96B54 188 aa7.35□□□□□ -1.23
LINC02397-201ENST00000504409 CCDC94Q9BW85 323 aaPredicted RBP7.35□□□□□ -1.23
LINC02397-201ENST00000504409 PDCP20941 246 aa7.35□□□□□ -1.23
LINC02397-201ENST00000504409 UVSSAQ2YD98 709 aa7.35□□□□□ -1.23
LINC02397-201ENST00000504409 B4GALNT3Q6L9W6 998 aa7.35□□□□□ -1.23
LINC02397-201ENST00000504409 RUFY1Q96T51 708 aa7.35□□□□□ -1.23
LINC02397-201ENST00000504409 SWAP70Q9UH65 585 aa7.35□□□□□ -1.23
LINC02397-201ENST00000504409 TSR1Q2NL82 804 aaKnown RBP7.35□□□□□ -1.23
LINC02397-201ENST00000504409 GIMAP7Q8NHV1 300 aa7.35□□□□□ -1.23
LINC02397-201ENST00000504409 DDX49Q9Y6V7 483 aaKnown RBP7.35□□□□□ -1.23
LINC02397-201ENST00000504409 RAB3GAP2Q9H2M9 1393 aa7.34□□□□□ -1.23
LINC02397-201ENST00000504409 IPO7O95373 1038 aaKnown RBP7.34□□□□□ -1.23
LINC02397-201ENST00000504409 FYB1O15117 783 aa7.34□□□□□ -1.23
LINC02397-201ENST00000504409 HMGB3O15347 200 aaKnown RBP7.34□□□□□ -1.23
LINC02397-201ENST00000504409 SPATS2Q86XZ4 545 aaKnown RBP7.34□□□□□ -1.23
LINC02397-201ENST00000504409 NOL10Q9BSC4 688 aaKnown RBP7.34□□□□□ -1.23
LINC02397-201ENST00000504409 ANKRD18BA2A2Z9 1011 aa7.34□□□□□ -1.23
LINC02397-201ENST00000504409 RSPH4AQ5TD94 716 aa7.34□□□□□ -1.23
LINC02397-201ENST00000504409 LRRFIP1Q32MZ4 808 aaKnown RBP7.34□□□□□ -1.24
LINC02397-201ENST00000504409 BRMS1Q9HCU9 246 aa7.33□□□□□ -1.24
LINC02397-201ENST00000504409 SPAG9O60271 1321 aaKnown RBP7.33□□□□□ -1.24
LINC02397-201ENST00000504409 RPAINQ86UA6 219 aa7.33□□□□□ -1.24
LINC02397-201ENST00000504409 EHBP1L1Q8N3D4 1523 aa7.33□□□□□ -1.24
LINC02397-201ENST00000504409 HOXA7P31268 230 aaPredicted RBP7.33□□□□□ -1.24
LINC02397-201ENST00000504409 TRDNQ13061 729 aa7.33□□□□□ -1.24
LINC02397-201ENST00000504409 RRP12Q5JTH9 1297 aaKnown RBP7.33□□□□□ -1.24
LINC02397-201ENST00000504409 NOC3LQ8WTT2 800 aaKnown RBP7.33□□□□□ -1.24
LINC02397-201ENST00000504409 KIF1CO43896 1103 aaKnown RBP7.33□□□□□ -1.24
LINC02397-201ENST00000504409 GOLGA2Q08379 1002 aa7.33□□□□□ -1.24
LINC02397-201ENST00000504409 ZMYND15Q9H091 742 aa7.33□□□□□ -1.24
LINC02397-201ENST00000504409 GRPEL1Q9HAV7 217 aa7.32□□□□□ -1.24
LINC02397-201ENST00000504409 EIF2AK4Q9P2K8 1649 aaKnown RBP7.32□□□□□ -1.24
LINC02397-201ENST00000504409 PPP1R15AO75807 674 aaPredicted RBP7.32□□□□□ -1.24
LINC02397-201ENST00000504409 BMS1Q14692 1282 aaKnown RBP7.32□□□□□ -1.24
LINC02397-201ENST00000504409 H0YHG0 523 aa7.32□□□□□ -1.24
LINC02397-201ENST00000504409 NF2P35240 595 aa7.32□□□□□ -1.24
LINC02397-201ENST00000504409 PAXIP1Q6ZW49 1069 aaPredicted RBP7.32□□□□□ -1.24
LINC02397-201ENST00000504409 SF3B2Q13435 895 aaKnown RBP7.32□□□□□ -1.24
LINC02397-201ENST00000504409 FILIP1Q7Z7B0 1213 aa7.32□□□□□ -1.24
LINC02397-201ENST00000504409 KIF3BO15066 747 aa7.32□□□□□ -1.24
LINC02397-201ENST00000504409 DDX19BQ9UMR2 479 aa7.32□□□□□ -1.24
LINC02397-201ENST00000504409 SLC26A8Q96RN1 970 aa7.32□□□□□ -1.24
LINC02397-201ENST00000504409 USH1CQ9Y6N9 552 aa7.32□□□□□ -1.24
LINC02397-201ENST00000504409 MPHOSPH10O00566 681 aaKnown RBP7.31□□□□□ -1.24
LINC02397-201ENST00000504409 SMARCA4P51532 1647 aa7.31□□□□□ -1.24
LINC02397-201ENST00000504409 PDE3AQ14432 1141 aa7.31□□□□□ -1.24
LINC02397-201ENST00000504409 TMCO5BA8MYB1 307 aa7.31□□□□□ -1.24
LINC02397-201ENST00000504409 TSPY4P0CV99 314 aa7.31□□□□□ -1.24
LINC02397-201ENST00000504409 TSPY10P0CW01 314 aa7.31□□□□□ -1.24
LINC02397-201ENST00000504409 CCDC9Q9Y3X0 531 aaKnown RBP7.31□□□□□ -1.24
LINC02397-201ENST00000504409 IBTKQ9P2D0 1353 aaPredicted RBP7.31□□□□□ -1.24
LINC02397-201ENST00000504409 SH2D4BQ5SQS7 431 aa7.31□□□□□ -1.24
LINC02397-201ENST00000504409 STK31Q9BXU1 1019 aa7.31□□□□□ -1.24
LINC02397-201ENST00000504409 BACH2Q9BYV9 841 aa7.31□□□□□ -1.24
LINC02397-201ENST00000504409 LUC7LQ9NQ29 371 aaKnown RBP7.31□□□□□ -1.24
LINC02397-201ENST00000504409 TUBB2AQ13885 445 aa7.3□□□□□ -1.24
LINC02397-201ENST00000504409 CCDC112Q8NEF3 446 aa7.3□□□□□ -1.24
LINC02397-201ENST00000504409 TUBB2BQ9BVA1 445 aa7.3□□□□□ -1.24
LINC02397-201ENST00000504409 PLPPR3Q6T4P5 718 aa7.3□□□□□ -1.24
LINC02397-201ENST00000504409 AQRO60306 1485 aaKnown RBP eCLIP7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms