RNA–Protein interactions for RNA: ENST00000503139.5

EXOSC9-203, Transcript of exosome component 9, humanhuman

TSL 1 (best)

Gene EXOSC9, Length 1,204 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC9-203ENST00000503139 DMRTA1Q5VZB9 504 aa16.13■□□□□ 0.17
EXOSC9-203ENST00000503139 SPIRE2Q8WWL2 714 aa16.13■□□□□ 0.17
EXOSC9-203ENST00000503139 RABGEF1Q9UJ41 708 aa16.13■□□□□ 0.17
EXOSC9-203ENST00000503139 EMP3P54852 163 aa16.12■□□□□ 0.17
EXOSC9-203ENST00000503139 AXIN2Q9Y2T1 843 aa16.12■□□□□ 0.17
EXOSC9-203ENST00000503139 PBX2P40425 430 aa16.11■□□□□ 0.17
EXOSC9-203ENST00000503139 MARVELD3Q96A59 401 aa16.1■□□□□ 0.17
EXOSC9-203ENST00000503139 SUPT5HO00267 1087 aaKnown RBP16.09■□□□□ 0.17
EXOSC9-203ENST00000503139 LIMD1Q9UGP4 676 aa16.09■□□□□ 0.17
EXOSC9-203ENST00000503139 ZNF687Q8N1G0 1237 aa16.07■□□□□ 0.16
EXOSC9-203ENST00000503139 SEPT9Q9UHD8 586 aaPredicted RBP16.06■□□□□ 0.16
EXOSC9-203ENST00000503139 RIC3Q7Z5B4 369 aa16.05■□□□□ 0.16
EXOSC9-203ENST00000503139 VPS9D1Q9Y2B5 631 aa16.05■□□□□ 0.16
EXOSC9-203ENST00000503139 SPTLC1O15269 473 aa16.04■□□□□ 0.16
EXOSC9-203ENST00000503139 MCM6Q14566 821 aa16.04■□□□□ 0.16
EXOSC9-203ENST00000503139 TUSC1Q2TAM9 212 aa16.04■□□□□ 0.16
EXOSC9-203ENST00000503139 FBXO31Q5XUX0 539 aaPredicted RBP16.04■□□□□ 0.16
EXOSC9-203ENST00000503139 FAM205CA6NFA0 338 aa16.03■□□□□ 0.16
EXOSC9-203ENST00000503139 SWT1Q5T5J6 900 aaKnown RBP16.03■□□□□ 0.16
EXOSC9-203ENST00000503139 NUTM1Q86Y26 1132 aa16.03■□□□□ 0.16
EXOSC9-203ENST00000503139 RDH13Q8NBN7 331 aa16.03■□□□□ 0.16
EXOSC9-203ENST00000503139 RSBN1LQ6PCB5 846 aaPredicted RBP16.02■□□□□ 0.16
EXOSC9-203ENST00000503139 ATP1B4Q9UN42 357 aaPredicted RBP16.02■□□□□ 0.16
EXOSC9-203ENST00000503139 POTEB3A0JP26 581 aa16■□□□□ 0.15
EXOSC9-203ENST00000503139 MOXD2PA6NHM9 499 aa16■□□□□ 0.15
EXOSC9-203ENST00000503139 SLC10A3P09131 477 aa16■□□□□ 0.15
EXOSC9-203ENST00000503139 GJA5P36382 358 aa16■□□□□ 0.15
EXOSC9-203ENST00000503139 FAM98CQ17RN3 349 aaKnown RBP16■□□□□ 0.15
EXOSC9-203ENST00000503139 PPP2R2DQ66LE6 453 aa16■□□□□ 0.15
EXOSC9-203ENST00000503139 POTEBQ6S5H4 581 aa16■□□□□ 0.15
EXOSC9-203ENST00000503139 GCGRP47871 477 aa15.99■□□□□ 0.15
EXOSC9-203ENST00000503139 RFC5P40937 340 aa15.98■□□□□ 0.15
EXOSC9-203ENST00000503139 KDM4AO75164 1064 aa15.97■□□□□ 0.15
EXOSC9-203ENST00000503139 HS3ST6Q96QI5 342 aa15.97■□□□□ 0.15
EXOSC9-203ENST00000503139 BHMG1C9JSJ3 638 aaPredicted RBP15.96■□□□□ 0.15
EXOSC9-203ENST00000503139 NDUFV2P19404 249 aa15.96■□□□□ 0.15
EXOSC9-203ENST00000503139 LAPTM4BQ86VI4 370 aa15.96■□□□□ 0.15
EXOSC9-203ENST00000503139 RSPH4AQ5TD94 716 aa15.94■□□□□ 0.14
EXOSC9-203ENST00000503139 FAM163AQ96GL9 167 aaPredicted RBP15.94■□□□□ 0.14
EXOSC9-203ENST00000503139 TK2O00142 265 aa15.93■□□□□ 0.14
EXOSC9-203ENST00000503139 USP46P62068 366 aa15.93■□□□□ 0.14
EXOSC9-203ENST00000503139 LCE2DQ5TA82 110 aaPredicted RBP15.93■□□□□ 0.14
EXOSC9-203ENST00000503139 A6NJR5 290 aa15.92■□□□□ 0.14
EXOSC9-203ENST00000503139 HOXA2O43364 376 aa15.92■□□□□ 0.14
EXOSC9-203ENST00000503139 BANK1Q8NDB2 785 aa15.92■□□□□ 0.14
EXOSC9-203ENST00000503139 NBPF3Q9H094 633 aa15.92■□□□□ 0.14
EXOSC9-203ENST00000503139 PCDHB15Q9Y5E8 787 aa15.92■□□□□ 0.14
EXOSC9-203ENST00000503139 LILRB3O75022 631 aa15.91■□□□□ 0.14
EXOSC9-203ENST00000503139 UBTFP17480 764 aaKnown RBP15.91■□□□□ 0.14
EXOSC9-203ENST00000503139 QPCTQ16769 361 aa15.91■□□□□ 0.14
EXOSC9-203ENST00000503139 SAMD7Q7Z3H4 446 aa15.91■□□□□ 0.14
EXOSC9-203ENST00000503139 CLUAP1Q96AJ1 413 aa15.91■□□□□ 0.14
EXOSC9-203ENST00000503139 SPDYE5A6NIY4 337 aa15.9■□□□□ 0.14
EXOSC9-203ENST00000503139 HDGFP51858 240 aaKnown RBP15.9■□□□□ 0.14
EXOSC9-203ENST00000503139 CSPP1Q1MSJ5 1256 aa15.89■□□□□ 0.13
EXOSC9-203ENST00000503139 TMEM259Q4ZIN3 620 aa15.89■□□□□ 0.13
EXOSC9-203ENST00000503139 SLF2Q8IX21 1173 aa15.89■□□□□ 0.13
EXOSC9-203ENST00000503139 ARXQ96QS3 562 aa15.89■□□□□ 0.13
EXOSC9-203ENST00000503139 LSM11P83369 360 aaKnown RBP eCLIP15.86■□□□□ 0.13
EXOSC9-203ENST00000503139 PRPF38BQ5VTL8 546 aaKnown RBP15.86■□□□□ 0.13
EXOSC9-203ENST00000503139 SNRKQ9NRH2 765 aa15.86■□□□□ 0.13
EXOSC9-203ENST00000503139 SLC4A3P48751 1232 aa15.85■□□□□ 0.13
EXOSC9-203ENST00000503139 ZFRQ96KR1 1074 aaKnown RBP15.85■□□□□ 0.13
EXOSC9-203ENST00000503139 FDX1P10109 184 aa15.84■□□□□ 0.13
EXOSC9-203ENST00000503139 RTL5Q5HYW3 569 aaPredicted RBP15.84■□□□□ 0.13
EXOSC9-203ENST00000503139 ADGRD1Q6QNK2 874 aa15.84■□□□□ 0.13
EXOSC9-203ENST00000503139 HLA-CQ95604 372 aa15.84■□□□□ 0.13
EXOSC9-203ENST00000503139 PCDHGC3Q9UN70 934 aa15.84■□□□□ 0.13
EXOSC9-203ENST00000503139 CABLES1Q8TDN4 633 aa15.83■□□□□ 0.12
EXOSC9-203ENST00000503139 C1orf115Q9H7X2 142 aa15.83■□□□□ 0.12
EXOSC9-203ENST00000503139 CFHP08603 1231 aa15.82■□□□□ 0.12
EXOSC9-203ENST00000503139 GUCA2AQ02747 115 aa15.82■□□□□ 0.12
EXOSC9-203ENST00000503139 POM121Q96HA1 1249 aa15.82■□□□□ 0.12
EXOSC9-203ENST00000503139 HRO43593 1189 aa15.81■□□□□ 0.12
EXOSC9-203ENST00000503139 MRPL50Q8N5N7 158 aaKnown RBP15.81■□□□□ 0.12
EXOSC9-203ENST00000503139 TRAK2O60296 914 aa15.8■□□□□ 0.12
EXOSC9-203ENST00000503139 HRCP23327 699 aa15.8■□□□□ 0.12
EXOSC9-203ENST00000503139 FUT2Q10981 343 aa15.8■□□□□ 0.12
EXOSC9-203ENST00000503139 ZBTB3Q9H5J0 574 aa15.8■□□□□ 0.12
EXOSC9-203ENST00000503139 MTMR14Q8NCE2 650 aa15.79■□□□□ 0.12
EXOSC9-203ENST00000503139 SOCS7O14512 581 aa15.78■□□□□ 0.12
EXOSC9-203ENST00000503139 NUTM2BA6NNL0 878 aaPredicted RBP15.77■□□□□ 0.12
EXOSC9-203ENST00000503139 NUTM2EB1AL46 878 aaPredicted RBP15.77■□□□□ 0.12
EXOSC9-203ENST00000503139 RNF40O75150 1001 aa15.77■□□□□ 0.12
EXOSC9-203ENST00000503139 NUTM2DQ5VT03 806 aaPredicted RBP15.77■□□□□ 0.12
EXOSC9-203ENST00000503139 NUTM2AQ8IVF1 878 aaPredicted RBP15.77■□□□□ 0.12
EXOSC9-203ENST00000503139 FNBP4Q8N3X1 1017 aaPredicted RBP15.77■□□□□ 0.12
EXOSC9-203ENST00000503139 COG6Q9Y2V7 657 aa15.77■□□□□ 0.12
EXOSC9-203ENST00000503139 PROSER2Q86WR7 435 aaPredicted RBP15.76■□□□□ 0.11
EXOSC9-203ENST00000503139 AP1G2O75843 785 aa15.75■□□□□ 0.11
EXOSC9-203ENST00000503139 ARID3CA6NKF2 412 aa15.74■□□□□ 0.11
EXOSC9-203ENST00000503139 LRCH3Q96II8 777 aa15.74■□□□□ 0.11
EXOSC9-203ENST00000503139 RAD21O60216 631 aa15.73■□□□□ 0.11
EXOSC9-203ENST00000503139 ATP6V1AP38606 617 aa15.73■□□□□ 0.11
EXOSC9-203ENST00000503139 GRIPAP1Q4V328 841 aa15.73■□□□□ 0.11
EXOSC9-203ENST00000503139 USP17L8P0C7I0 530 aa15.72■□□□□ 0.11
EXOSC9-203ENST00000503139 MTMR2Q13614 643 aa15.72■□□□□ 0.11
EXOSC9-203ENST00000503139 KMT5BQ4FZB7 885 aa15.72■□□□□ 0.11
EXOSC9-203ENST00000503139 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.72■□□□□ 0.11
EXOSC9-203ENST00000503139 APBB1O00213 710 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms