RNA–Protein interactions for RNA: ENST00000502734.1

COPB2-202, Transcript of coatomer protein complex subunit beta 2, humanhuman

TSL 2

Gene COPB2, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-202ENST00000502734 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.72□□□□□ -0.21
COPB2-202ENST00000502734 SYNMO15061 1565 aa13.71□□□□□ -0.21
COPB2-202ENST00000502734 SOCS7O14512 581 aa13.71□□□□□ -0.21
COPB2-202ENST00000502734 STRCP1A6NGW2 1772 aa13.7□□□□□ -0.22
COPB2-202ENST00000502734 TBX22Q9Y458 520 aa13.69□□□□□ -0.22
COPB2-202ENST00000502734 TMEM94Q12767 1356 aa13.69□□□□□ -0.22
COPB2-202ENST00000502734 KDM5AP29375 1690 aaKnown RBP13.69□□□□□ -0.22
COPB2-202ENST00000502734 RIMS2Q9UQ26 1411 aa13.68□□□□□ -0.22
COPB2-202ENST00000502734 RBM33Q96EV2 1170 aaKnown RBP13.68□□□□□ -0.22
COPB2-202ENST00000502734 TET3O43151 1660 aa13.68□□□□□ -0.22
COPB2-202ENST00000502734 NUTM2DQ5VT03 806 aaPredicted RBP13.67□□□□□ -0.22
COPB2-202ENST00000502734 ADGRB3O60242 1522 aa13.67□□□□□ -0.22
COPB2-202ENST00000502734 PLEKHG1Q9ULL1 1385 aa13.67□□□□□ -0.22
COPB2-202ENST00000502734 ALKQ9UM73 1620 aa13.67□□□□□ -0.22
COPB2-202ENST00000502734 ZFYVE9O95405 1425 aa13.65□□□□□ -0.22
COPB2-202ENST00000502734 UNC13BO14795 1591 aa13.65□□□□□ -0.22
COPB2-202ENST00000502734 FAM135BQ49AJ0 1406 aa13.64□□□□□ -0.23
COPB2-202ENST00000502734 RRBP1Q9P2E9 1410 aaKnown RBP13.63□□□□□ -0.23
COPB2-202ENST00000502734 ZNF326Q5BKZ1 582 aaKnown RBP13.62□□□□□ -0.23
COPB2-202ENST00000502734 SLAIN2Q9P270 581 aa13.62□□□□□ -0.23
COPB2-202ENST00000502734 GCC2Q8IWJ2 1684 aa13.62□□□□□ -0.23
COPB2-202ENST00000502734 TMEM131LA2VDJ0 1609 aa13.61□□□□□ -0.23
COPB2-202ENST00000502734 TRIM52Q96A61 297 aa13.61□□□□□ -0.23
COPB2-202ENST00000502734 IQGAP3Q86VI3 1631 aa13.61□□□□□ -0.23
COPB2-202ENST00000502734 MSH6P52701 1360 aa13.6□□□□□ -0.23
COPB2-202ENST00000502734 E9PCH4 1651 aa13.6□□□□□ -0.23
COPB2-202ENST00000502734 C14orf37Q86TY3 774 aa13.59□□□□□ -0.23
COPB2-202ENST00000502734 AMOTL2Q9Y2J4 779 aa13.59□□□□□ -0.23
COPB2-202ENST00000502734 NAIPQ13075 1403 aa13.58□□□□□ -0.24
COPB2-202ENST00000502734 C19orf44Q9H6X5 657 aa13.58□□□□□ -0.24
COPB2-202ENST00000502734 NKTRP30414 1462 aaKnown RBP13.58□□□□□ -0.24
COPB2-202ENST00000502734 PIK3R4Q99570 1358 aa13.58□□□□□ -0.24
COPB2-202ENST00000502734 XIRP1Q702N8 1843 aaKnown RBP13.57□□□□□ -0.24
COPB2-202ENST00000502734 ADAMTS13Q76LX8 1427 aa13.57□□□□□ -0.24
COPB2-202ENST00000502734 NCOA3Q9Y6Q9 1424 aa13.57□□□□□ -0.24
COPB2-202ENST00000502734 MYO5BQ9ULV0 1848 aa13.56□□□□□ -0.24
COPB2-202ENST00000502734 SLC4A1APQ9BWU0 796 aaKnown RBP13.56□□□□□ -0.24
COPB2-202ENST00000502734 MED1Q15648 1581 aaPredicted RBP13.56□□□□□ -0.24
COPB2-202ENST00000502734 ATF3P18847 181 aa13.55□□□□□ -0.24
COPB2-202ENST00000502734 CADPS2Q86UW7 1296 aa13.55□□□□□ -0.24
COPB2-202ENST00000502734 NWD1Q149M9 1564 aa13.54□□□□□ -0.24
COPB2-202ENST00000502734 CHD2O14647 1828 aaKnown RBP13.53□□□□□ -0.24
COPB2-202ENST00000502734 VGFO15240 615 aaPredicted RBP13.52□□□□□ -0.25
COPB2-202ENST00000502734 HFM1A2PYH4 1435 aa13.52□□□□□ -0.25
COPB2-202ENST00000502734 PTPRUQ92729 1446 aa13.51□□□□□ -0.25
COPB2-202ENST00000502734 RGS17Q9UGC6 210 aaPredicted RBP13.51□□□□□ -0.25
COPB2-202ENST00000502734 DIP2AQ14689 1571 aa13.49□□□□□ -0.25
COPB2-202ENST00000502734 METP08581 1390 aa13.49□□□□□ -0.25
COPB2-202ENST00000502734 RPGRIP1LQ68CZ1 1315 aa13.49□□□□□ -0.25
COPB2-202ENST00000502734 TRPM2O94759 1503 aa13.49□□□□□ -0.25
COPB2-202ENST00000502734 ROBO1Q9Y6N7 1651 aa13.48□□□□□ -0.25
COPB2-202ENST00000502734 SPHKAPQ2M3C7 1700 aa13.47□□□□□ -0.25
COPB2-202ENST00000502734 JCADQ9P266 1359 aa13.46□□□□□ -0.25
COPB2-202ENST00000502734 BRINP3Q76B58 766 aa13.46□□□□□ -0.25
COPB2-202ENST00000502734 MPHOSPH9Q99550 1183 aa13.46□□□□□ -0.25
COPB2-202ENST00000502734 PPP4R3CPQ6ZMV5 832 aa13.45□□□□□ -0.26
COPB2-202ENST00000502734 SETBP1Q9Y6X0 1596 aa13.45□□□□□ -0.26
COPB2-202ENST00000502734 ACIN1Q9UKV3 1341 aaKnown RBP13.44□□□□□ -0.26
COPB2-202ENST00000502734 CLTCL1P53675 1640 aa13.44□□□□□ -0.26
COPB2-202ENST00000502734 MAPK8IP2Q13387 824 aaPredicted RBP13.44□□□□□ -0.26
COPB2-202ENST00000502734 POTEAQ6S8J7 498 aa13.44□□□□□ -0.26
COPB2-202ENST00000502734 RGL3Q3MIN7 710 aa13.43□□□□□ -0.26
COPB2-202ENST00000502734 NEXMIFQ5QGS0 1516 aa13.42□□□□□ -0.26
COPB2-202ENST00000502734 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.42□□□□□ -0.26
COPB2-202ENST00000502734 SPATA31A6Q5VVP1 1343 aa13.41□□□□□ -0.26
COPB2-202ENST00000502734 DCCP43146 1447 aa13.41□□□□□ -0.26
COPB2-202ENST00000502734 NRXN3Q9Y4C0 1643 aa13.41□□□□□ -0.26
COPB2-202ENST00000502734 PHLPP1O60346 1717 aa13.4□□□□□ -0.26
COPB2-202ENST00000502734 MEX3CQ5U5Q3 659 aaKnown RBP13.4□□□□□ -0.26
COPB2-202ENST00000502734 LRRC59Q96AG4 307 aaKnown RBP13.4□□□□□ -0.26
COPB2-202ENST00000502734 KIF1BO60333 1816 aa13.4□□□□□ -0.26
COPB2-202ENST00000502734 ADGRF5Q8IZF2 1346 aa13.39□□□□□ -0.27
COPB2-202ENST00000502734 CCDC144AA2RUR9 1427 aa13.38□□□□□ -0.27
COPB2-202ENST00000502734 MST1RQ04912 1400 aa13.38□□□□□ -0.27
COPB2-202ENST00000502734 ROBO2Q9HCK4 1378 aa13.37□□□□□ -0.27
COPB2-202ENST00000502734 XRN1Q8IZH2 1706 aaKnown RBP13.37□□□□□ -0.27
COPB2-202ENST00000502734 NUTM2BA6NNL0 878 aaPredicted RBP13.37□□□□□ -0.27
COPB2-202ENST00000502734 NUTM2EB1AL46 878 aaPredicted RBP13.37□□□□□ -0.27
COPB2-202ENST00000502734 NUTM2AQ8IVF1 878 aaPredicted RBP13.37□□□□□ -0.27
COPB2-202ENST00000502734 SETD5Q9C0A6 1442 aa13.37□□□□□ -0.27
COPB2-202ENST00000502734 ADGRL3Q9HAR2 1447 aa13.37□□□□□ -0.27
COPB2-202ENST00000502734 ZNF772Q68DY9 489 aaPredicted RBP13.36□□□□□ -0.27
COPB2-202ENST00000502734 DDX17Q92841 729 aaKnown RBP13.36□□□□□ -0.27
COPB2-202ENST00000502734 ANKRD30BQ9BXX2 1392 aa13.35□□□□□ -0.27
COPB2-202ENST00000502734 ORAI2Q96SN7 254 aa13.35□□□□□ -0.27
COPB2-202ENST00000502734 STK26Q9P289 416 aa13.35□□□□□ -0.27
COPB2-202ENST00000502734 COL16A1Q07092 1604 aaPredicted RBP13.35□□□□□ -0.27
COPB2-202ENST00000502734 AHDC1Q5TGY3 1603 aaPredicted RBP13.35□□□□□ -0.27
COPB2-202ENST00000502734 PTCH1Q13635 1447 aa13.34□□□□□ -0.27
COPB2-202ENST00000502734 SPATA31E1Q6ZUB1 1445 aa13.33□□□□□ -0.28
COPB2-202ENST00000502734 TMEM132EQ6IEE7 984 aa13.33□□□□□ -0.28
COPB2-202ENST00000502734 WAPLQ7Z5K2 1190 aa13.33□□□□□ -0.28
COPB2-202ENST00000502734 C1orf167Q5SNV9 1468 aa13.33□□□□□ -0.28
COPB2-202ENST00000502734 ASXL1Q8IXJ9 1541 aa13.33□□□□□ -0.28
COPB2-202ENST00000502734 ESCO1Q5FWF5 840 aa13.31□□□□□ -0.28
COPB2-202ENST00000502734 C14orf93Q9H972 538 aaKnown RBP13.31□□□□□ -0.28
COPB2-202ENST00000502734 LRP6O75581 1613 aa13.31□□□□□ -0.28
COPB2-202ENST00000502734 PRAG1Q86YV5 1406 aa13.3□□□□□ -0.28
COPB2-202ENST00000502734 RXRBP28702 533 aa13.3□□□□□ -0.28
COPB2-202ENST00000502734 SOS2Q07890 1332 aaPredicted RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms