RNA–Protein interactions for RNA: ENST00000502690.5

UBE2D3-213, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-213ENST00000502690 SLC26A8Q96RN1 970 aa26.3■■□□□ 1.8
UBE2D3-213ENST00000502690 ROCK1Q13464 1354 aa26.3■■□□□ 1.8
UBE2D3-213ENST00000502690 SLC52A1Q9NWF4 448 aa26.28■■□□□ 1.8
UBE2D3-213ENST00000502690 TMEM94Q12767 1356 aa26.25■■□□□ 1.79
UBE2D3-213ENST00000502690 RBM33Q96EV2 1170 aaKnown RBP26.25■■□□□ 1.79
UBE2D3-213ENST00000502690 CHD2O14647 1828 aaKnown RBP26.25■■□□□ 1.79
UBE2D3-213ENST00000502690 RIMS2Q9UQ26 1411 aa26.23■■□□□ 1.79
UBE2D3-213ENST00000502690 ITGAEP38570 1179 aa26.23■■□□□ 1.79
UBE2D3-213ENST00000502690 KCNA6P17658 529 aa26.22■■□□□ 1.79
UBE2D3-213ENST00000502690 NKTRP30414 1462 aaKnown RBP26.21■■□□□ 1.79
UBE2D3-213ENST00000502690 ROBO1Q9Y6N7 1651 aa26.19■■□□□ 1.78
UBE2D3-213ENST00000502690 PLEKHG1Q9ULL1 1385 aa26.19■■□□□ 1.78
UBE2D3-213ENST00000502690 NUP155O75694 1391 aa26.16■■□□□ 1.78
UBE2D3-213ENST00000502690 SPHKAPQ2M3C7 1700 aa26.16■■□□□ 1.78
UBE2D3-213ENST00000502690 PROSER2Q86WR7 435 aaPredicted RBP26.15■■□□□ 1.78
UBE2D3-213ENST00000502690 NUTM2DQ5VT03 806 aaPredicted RBP26.14■■□□□ 1.78
UBE2D3-213ENST00000502690 BCANQ96GW7 911 aa26.14■■□□□ 1.78
UBE2D3-213ENST00000502690 ADAMTS13Q76LX8 1427 aa26.14■■□□□ 1.77
UBE2D3-213ENST00000502690 CHGAP10645 457 aaKnown RBP26.13■■□□□ 1.77
UBE2D3-213ENST00000502690 FAM135BQ49AJ0 1406 aa26.13■■□□□ 1.77
UBE2D3-213ENST00000502690 PPP1R15AO75807 674 aaPredicted RBP26.11■■□□□ 1.77
UBE2D3-213ENST00000502690 RRBP1Q9P2E9 1410 aaKnown RBP26.08■■□□□ 1.77
UBE2D3-213ENST00000502690 NRXN3Q9Y4C0 1643 aa26.08■■□□□ 1.77
UBE2D3-213ENST00000502690 DIP2AQ14689 1571 aa26.07■■□□□ 1.76
UBE2D3-213ENST00000502690 PHF23Q9BUL5 403 aaPredicted RBP26.05■■□□□ 1.76
UBE2D3-213ENST00000502690 CLTCL1P53675 1640 aa26.04■■□□□ 1.76
UBE2D3-213ENST00000502690 MSH6P52701 1360 aa26.04■■□□□ 1.76
UBE2D3-213ENST00000502690 PHLPP1O60346 1717 aa26.03■■□□□ 1.76
UBE2D3-213ENST00000502690 TBX22Q9Y458 520 aa26.03■■□□□ 1.76
UBE2D3-213ENST00000502690 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.02■■□□□ 1.76
UBE2D3-213ENST00000502690 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.01■■□□□ 1.75
UBE2D3-213ENST00000502690 PTPRUQ92729 1446 aa26.01■■□□□ 1.75
UBE2D3-213ENST00000502690 TRPM2O94759 1503 aa26■■□□□ 1.75
UBE2D3-213ENST00000502690 NAIPQ13075 1403 aa26■■□□□ 1.75
UBE2D3-213ENST00000502690 HDGFP51858 240 aaKnown RBP26■■□□□ 1.75
UBE2D3-213ENST00000502690 RGS17Q9UGC6 210 aaPredicted RBP26■■□□□ 1.75
UBE2D3-213ENST00000502690 XRN1Q8IZH2 1706 aaKnown RBP25.99■■□□□ 1.75
UBE2D3-213ENST00000502690 SETBP1Q9Y6X0 1596 aa25.98■■□□□ 1.75
UBE2D3-213ENST00000502690 COL16A1Q07092 1604 aaPredicted RBP25.96■■□□□ 1.75
UBE2D3-213ENST00000502690 NEXMIFQ5QGS0 1516 aa25.95■■□□□ 1.74
UBE2D3-213ENST00000502690 SLAIN2Q9P270 581 aa25.95■■□□□ 1.74
UBE2D3-213ENST00000502690 KIF1BO60333 1816 aa25.95■■□□□ 1.74
UBE2D3-213ENST00000502690 PIK3R4Q99570 1358 aa25.95■■□□□ 1.74
UBE2D3-213ENST00000502690 NCOA3Q9Y6Q9 1424 aa25.92■■□□□ 1.74
UBE2D3-213ENST00000502690 AMOTL2Q9Y2J4 779 aa25.89■■□□□ 1.74
UBE2D3-213ENST00000502690 METP08581 1390 aa25.88■■□□□ 1.73
UBE2D3-213ENST00000502690 SETD1AO15047 1707 aaKnown RBP25.88■■□□□ 1.73
UBE2D3-213ENST00000502690 C14orf37Q86TY3 774 aa25.87■■□□□ 1.73
UBE2D3-213ENST00000502690 HFM1A2PYH4 1435 aa25.87■■□□□ 1.73
UBE2D3-213ENST00000502690 AHDC1Q5TGY3 1603 aaPredicted RBP25.86■■□□□ 1.73
UBE2D3-213ENST00000502690 ZNF326Q5BKZ1 582 aaKnown RBP25.86■■□□□ 1.73
UBE2D3-213ENST00000502690 NALCNQ8IZF0 1738 aa25.84■■□□□ 1.73
UBE2D3-213ENST00000502690 C19orf44Q9H6X5 657 aa25.83■■□□□ 1.73
UBE2D3-213ENST00000502690 LRP6O75581 1613 aa25.82■■□□□ 1.72
UBE2D3-213ENST00000502690 POTEAQ6S8J7 498 aa25.82■■□□□ 1.72
UBE2D3-213ENST00000502690 JCADQ9P266 1359 aa25.82■■□□□ 1.72
UBE2D3-213ENST00000502690 SHPRHQ149N8 1683 aa25.8■■□□□ 1.72
UBE2D3-213ENST00000502690 PPLO60437 1756 aa25.8■■□□□ 1.72
UBE2D3-213ENST00000502690 CADPS2Q86UW7 1296 aa25.8■■□□□ 1.72
UBE2D3-213ENST00000502690 ATF3P18847 181 aa25.78■■□□□ 1.72
UBE2D3-213ENST00000502690 TRIM52Q96A61 297 aa25.77■■□□□ 1.72
UBE2D3-213ENST00000502690 DCCP43146 1447 aa25.77■■□□□ 1.72
UBE2D3-213ENST00000502690 MST1RQ04912 1400 aa25.77■■□□□ 1.72
UBE2D3-213ENST00000502690 ASXL1Q8IXJ9 1541 aa25.77■■□□□ 1.72
UBE2D3-213ENST00000502690 NHSL1Q5SYE7 1610 aa25.77■■□□□ 1.72
UBE2D3-213ENST00000502690 BRINP3Q76B58 766 aa25.75■■□□□ 1.71
UBE2D3-213ENST00000502690 ADGRL3Q9HAR2 1447 aa25.73■■□□□ 1.71
UBE2D3-213ENST00000502690 FOXD1Q16676 465 aa25.71■■□□□ 1.71
UBE2D3-213ENST00000502690 SLC4A1APQ9BWU0 796 aaKnown RBP25.71■■□□□ 1.71
UBE2D3-213ENST00000502690 IFT172Q9UG01 1749 aa25.68■■□□□ 1.7
UBE2D3-213ENST00000502690 ROBO2Q9HCK4 1378 aa25.67■■□□□ 1.7
UBE2D3-213ENST00000502690 PTCH1Q13635 1447 aa25.66■■□□□ 1.7
UBE2D3-213ENST00000502690 SPATA31A6Q5VVP1 1343 aa25.65■■□□□ 1.7
UBE2D3-213ENST00000502690 DDX17Q92841 729 aaKnown RBP25.64■■□□□ 1.7
UBE2D3-213ENST00000502690 PRAG1Q86YV5 1406 aa25.62■■□□□ 1.69
UBE2D3-213ENST00000502690 SETD5Q9C0A6 1442 aa25.62■■□□□ 1.69
UBE2D3-213ENST00000502690 LAMC1P11047 1609 aa25.6■■□□□ 1.69
UBE2D3-213ENST00000502690 VGFO15240 615 aaPredicted RBP25.6■■□□□ 1.69
UBE2D3-213ENST00000502690 C1orf167Q5SNV9 1468 aa25.6■■□□□ 1.69
UBE2D3-213ENST00000502690 SPATA31E1Q6ZUB1 1445 aa25.59■■□□□ 1.69
UBE2D3-213ENST00000502690 RPGRIP1LQ68CZ1 1315 aa25.59■■□□□ 1.69
UBE2D3-213ENST00000502690 MEX3CQ5U5Q3 659 aaKnown RBP25.57■■□□□ 1.68
UBE2D3-213ENST00000502690 NUTM2BA6NNL0 878 aaPredicted RBP25.56■■□□□ 1.68
UBE2D3-213ENST00000502690 NUTM2EB1AL46 878 aaPredicted RBP25.56■■□□□ 1.68
UBE2D3-213ENST00000502690 NUTM2AQ8IVF1 878 aaPredicted RBP25.56■■□□□ 1.68
UBE2D3-213ENST00000502690 ADGRF5Q8IZF2 1346 aa25.56■■□□□ 1.68
UBE2D3-213ENST00000502690 CCDC144AA2RUR9 1427 aa25.55■■□□□ 1.68
UBE2D3-213ENST00000502690 PNPLA6Q8IY17 1366 aa25.54■■□□□ 1.68
UBE2D3-213ENST00000502690 MPHOSPH9Q99550 1183 aa25.53■■□□□ 1.68
UBE2D3-213ENST00000502690 ORAI2Q96SN7 254 aa25.51■■□□□ 1.67
UBE2D3-213ENST00000502690 CDC42BPGQ6DT37 1551 aa25.51■■□□□ 1.67
UBE2D3-213ENST00000502690 KNDC1Q76NI1 1749 aa25.51■■□□□ 1.67
UBE2D3-213ENST00000502690 RGL3Q3MIN7 710 aa25.5■■□□□ 1.67
UBE2D3-213ENST00000502690 ZNF772Q68DY9 489 aaPredicted RBP25.47■■□□□ 1.67
UBE2D3-213ENST00000502690 LRRC59Q96AG4 307 aaKnown RBP25.47■■□□□ 1.67
UBE2D3-213ENST00000502690 PIK3C2GO75747 1445 aa25.46■■□□□ 1.67
UBE2D3-213ENST00000502690 TECPR2O15040 1411 aa25.46■■□□□ 1.67
UBE2D3-213ENST00000502690 AFF2P51816 1311 aa25.45■■□□□ 1.66
UBE2D3-213ENST00000502690 ANKRD30BQ9BXX2 1392 aa25.44■■□□□ 1.66
UBE2D3-213ENST00000502690 PLEKHH1Q9ULM0 1364 aa25.44■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms