RNA–Protein interactions for RNA: ENST00000498872.2

AP004609.1-201, humanhuman

TSL 1 (best) BASIC

Gene AP004609.1, Length 1,646 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004609.1-201ENST00000498872 HSPA1LP34931 641 aa25.7■■□□□ 1.71
AP004609.1-201ENST00000498872 NUP155O75694 1391 aa25.7■■□□□ 1.7
AP004609.1-201ENST00000498872 TMEM131LA2VDJ0 1609 aa25.69■■□□□ 1.7
AP004609.1-201ENST00000498872 BCANQ96GW7 911 aa25.67■■□□□ 1.7
AP004609.1-201ENST00000498872 CHGAP10645 457 aaKnown RBP25.66■■□□□ 1.7
AP004609.1-201ENST00000498872 ILDR2Q71H61 639 aa25.66■■□□□ 1.7
AP004609.1-201ENST00000498872 RRBP1Q9P2E9 1410 aaKnown RBP25.64■■□□□ 1.7
AP004609.1-201ENST00000498872 ZFYVE9O95405 1425 aa25.63■■□□□ 1.69
AP004609.1-201ENST00000498872 RIMS2Q9UQ26 1411 aa25.62■■□□□ 1.69
AP004609.1-201ENST00000498872 RBM33Q96EV2 1170 aaKnown RBP25.61■■□□□ 1.69
AP004609.1-201ENST00000498872 PPP1R15AO75807 674 aaPredicted RBP25.6■■□□□ 1.69
AP004609.1-201ENST00000498872 NUTM2DQ5VT03 806 aaPredicted RBP25.6■■□□□ 1.69
AP004609.1-201ENST00000498872 KCNA6P17658 529 aa25.58■■□□□ 1.69
AP004609.1-201ENST00000498872 SPHKAPQ2M3C7 1700 aa25.57■■□□□ 1.68
AP004609.1-201ENST00000498872 TMEM94Q12767 1356 aa25.57■■□□□ 1.68
AP004609.1-201ENST00000498872 PLEKHG1Q9ULL1 1385 aa25.56■■□□□ 1.68
AP004609.1-201ENST00000498872 PROSER2Q86WR7 435 aaPredicted RBP25.55■■□□□ 1.68
AP004609.1-201ENST00000498872 NWD1Q149M9 1564 aa25.55■■□□□ 1.68
AP004609.1-201ENST00000498872 CHD2O14647 1828 aaKnown RBP25.53■■□□□ 1.68
AP004609.1-201ENST00000498872 NAIPQ13075 1403 aa25.53■■□□□ 1.68
AP004609.1-201ENST00000498872 HDGFP51858 240 aaKnown RBP25.53■■□□□ 1.68
AP004609.1-201ENST00000498872 MED1Q15648 1581 aaPredicted RBP25.51■■□□□ 1.68
AP004609.1-201ENST00000498872 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.5■■□□□ 1.67
AP004609.1-201ENST00000498872 NKTRP30414 1462 aaKnown RBP25.49■■□□□ 1.67
AP004609.1-201ENST00000498872 ADAMTS13Q76LX8 1427 aa25.46■■□□□ 1.67
AP004609.1-201ENST00000498872 CLTCL1P53675 1640 aa25.45■■□□□ 1.66
AP004609.1-201ENST00000498872 TRIM52Q96A61 297 aa25.44■■□□□ 1.66
AP004609.1-201ENST00000498872 TBX22Q9Y458 520 aa25.44■■□□□ 1.66
AP004609.1-201ENST00000498872 HFM1A2PYH4 1435 aa25.43■■□□□ 1.66
AP004609.1-201ENST00000498872 ROBO1Q9Y6N7 1651 aa25.42■■□□□ 1.66
AP004609.1-201ENST00000498872 ZNF326Q5BKZ1 582 aaKnown RBP25.42■■□□□ 1.66
AP004609.1-201ENST00000498872 DIP2AQ14689 1571 aa25.41■■□□□ 1.66
AP004609.1-201ENST00000498872 MSH6P52701 1360 aa25.4■■□□□ 1.66
AP004609.1-201ENST00000498872 TRPM2O94759 1503 aa25.39■■□□□ 1.66
AP004609.1-201ENST00000498872 FAM135BQ49AJ0 1406 aa25.39■■□□□ 1.65
AP004609.1-201ENST00000498872 KIF1BO60333 1816 aa25.39■■□□□ 1.65
AP004609.1-201ENST00000498872 SOCS7O14512 581 aa25.38■■□□□ 1.65
AP004609.1-201ENST00000498872 NRXN3Q9Y4C0 1643 aa25.38■■□□□ 1.65
AP004609.1-201ENST00000498872 C14orf37Q86TY3 774 aa25.35■■□□□ 1.65
AP004609.1-201ENST00000498872 PTPRUQ92729 1446 aa25.34■■□□□ 1.65
AP004609.1-201ENST00000498872 ZEB1P37275 1124 aaPredicted RBP25.34■■□□□ 1.65
AP004609.1-201ENST00000498872 NEXMIFQ5QGS0 1516 aa25.33■■□□□ 1.65
AP004609.1-201ENST00000498872 PHF23Q9BUL5 403 aaPredicted RBP25.33■■□□□ 1.65
AP004609.1-201ENST00000498872 SLC4A1APQ9BWU0 796 aaKnown RBP25.33■■□□□ 1.65
AP004609.1-201ENST00000498872 AMOTL2Q9Y2J4 779 aa25.33■■□□□ 1.65
AP004609.1-201ENST00000498872 SETBP1Q9Y6X0 1596 aa25.32■■□□□ 1.64
AP004609.1-201ENST00000498872 SLAIN2Q9P270 581 aa25.32■■□□□ 1.64
AP004609.1-201ENST00000498872 PIK3R4Q99570 1358 aa25.32■■□□□ 1.64
AP004609.1-201ENST00000498872 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.31■■□□□ 1.64
AP004609.1-201ENST00000498872 FOXD1Q16676 465 aa25.29■■□□□ 1.64
AP004609.1-201ENST00000498872 PHLPP1O60346 1717 aa25.28■■□□□ 1.64
AP004609.1-201ENST00000498872 XRN1Q8IZH2 1706 aaKnown RBP25.27■■□□□ 1.64
AP004609.1-201ENST00000498872 METP08581 1390 aa25.27■■□□□ 1.64
AP004609.1-201ENST00000498872 NCOA3Q9Y6Q9 1424 aa25.26■■□□□ 1.63
AP004609.1-201ENST00000498872 C19orf44Q9H6X5 657 aa25.23■■□□□ 1.63
AP004609.1-201ENST00000498872 ATF3P18847 181 aa25.22■■□□□ 1.63
AP004609.1-201ENST00000498872 CADPS2Q86UW7 1296 aa25.19■■□□□ 1.62
AP004609.1-201ENST00000498872 PPLO60437 1756 aa25.19■■□□□ 1.62
AP004609.1-201ENST00000498872 SETD1AO15047 1707 aaKnown RBP25.17■■□□□ 1.62
AP004609.1-201ENST00000498872 COL16A1Q07092 1604 aaPredicted RBP25.17■■□□□ 1.62
AP004609.1-201ENST00000498872 VGFO15240 615 aaPredicted RBP25.15■■□□□ 1.62
AP004609.1-201ENST00000498872 RGS17Q9UGC6 210 aaPredicted RBP25.15■■□□□ 1.62
AP004609.1-201ENST00000498872 MPHOSPH9Q99550 1183 aa25.15■■□□□ 1.62
AP004609.1-201ENST00000498872 NALCNQ8IZF0 1738 aa25.15■■□□□ 1.62
AP004609.1-201ENST00000498872 CCDC144AA2RUR9 1427 aa25.12■■□□□ 1.61
AP004609.1-201ENST00000498872 DCCP43146 1447 aa25.1■■□□□ 1.61
AP004609.1-201ENST00000498872 RPGRIP1LQ68CZ1 1315 aa25.1■■□□□ 1.61
AP004609.1-201ENST00000498872 JCADQ9P266 1359 aa25.1■■□□□ 1.61
AP004609.1-201ENST00000498872 RGL3Q3MIN7 710 aa25.1■■□□□ 1.61
AP004609.1-201ENST00000498872 BRINP3Q76B58 766 aa25.1■■□□□ 1.61
AP004609.1-201ENST00000498872 AHDC1Q5TGY3 1603 aaPredicted RBP25.1■■□□□ 1.61
AP004609.1-201ENST00000498872 CCER1Q8TC90 406 aaPredicted RBP25.09■■□□□ 1.61
AP004609.1-201ENST00000498872 MST1RQ04912 1400 aa25.08■■□□□ 1.61
AP004609.1-201ENST00000498872 ADGRL3Q9HAR2 1447 aa25.08■■□□□ 1.61
AP004609.1-201ENST00000498872 SETD5Q9C0A6 1442 aa25.07■■□□□ 1.6
AP004609.1-201ENST00000498872 IFT172Q9UG01 1749 aa25.06■■□□□ 1.6
AP004609.1-201ENST00000498872 ASXL1Q8IXJ9 1541 aa25.06■■□□□ 1.6
AP004609.1-201ENST00000498872 ROBO2Q9HCK4 1378 aa25.05■■□□□ 1.6
AP004609.1-201ENST00000498872 ADGRF5Q8IZF2 1346 aa25.04■■□□□ 1.6
AP004609.1-201ENST00000498872 SPATA31E1Q6ZUB1 1445 aa25.04■■□□□ 1.6
AP004609.1-201ENST00000498872 POTEAQ6S8J7 498 aa25.03■■□□□ 1.6
AP004609.1-201ENST00000498872 PTCH1Q13635 1447 aa25.03■■□□□ 1.6
AP004609.1-201ENST00000498872 SHPRHQ149N8 1683 aa25.02■■□□□ 1.6
AP004609.1-201ENST00000498872 LRP6O75581 1613 aa25.02■■□□□ 1.6
AP004609.1-201ENST00000498872 NHSL1Q5SYE7 1610 aa25.02■■□□□ 1.6
AP004609.1-201ENST00000498872 DDX17Q92841 729 aaKnown RBP25.01■■□□□ 1.59
AP004609.1-201ENST00000498872 RAB3GAP2Q9H2M9 1393 aa25.01■■□□□ 1.59
AP004609.1-201ENST00000498872 SPATA31A6Q5VVP1 1343 aa24.97■■□□□ 1.59
AP004609.1-201ENST00000498872 STK26Q9P289 416 aa24.96■■□□□ 1.59
AP004609.1-201ENST00000498872 ANKRD30BQ9BXX2 1392 aa24.96■■□□□ 1.59
AP004609.1-201ENST00000498872 C1orf167Q5SNV9 1468 aa24.95■■□□□ 1.58
AP004609.1-201ENST00000498872 MEX3CQ5U5Q3 659 aaKnown RBP24.95■■□□□ 1.58
AP004609.1-201ENST00000498872 NUTM2BA6NNL0 878 aaPredicted RBP24.94■■□□□ 1.58
AP004609.1-201ENST00000498872 NUTM2EB1AL46 878 aaPredicted RBP24.94■■□□□ 1.58
AP004609.1-201ENST00000498872 PRAG1Q86YV5 1406 aa24.94■■□□□ 1.58
AP004609.1-201ENST00000498872 NUTM2AQ8IVF1 878 aaPredicted RBP24.94■■□□□ 1.58
AP004609.1-201ENST00000498872 TMEM132EQ6IEE7 984 aa24.94■■□□□ 1.58
AP004609.1-201ENST00000498872 ORAI2Q96SN7 254 aa24.92■■□□□ 1.58
AP004609.1-201ENST00000498872 PIK3C2GO75747 1445 aa24.91■■□□□ 1.58
AP004609.1-201ENST00000498872 ACIN1Q9UKV3 1341 aaKnown RBP24.91■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms