RNA–Protein interactions for RNA: ENST00000498124.1

CDKN2A-208, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 880 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-208ENST00000498124 SLC26A8Q96RN1 970 aa34.59■■■■□ 3.13
CDKN2A-208ENST00000498124 ITGAEP38570 1179 aa34.58■■■■□ 3.13
CDKN2A-208ENST00000498124 RIMS2Q9UQ26 1411 aa34.56■■■■□ 3.12
CDKN2A-208ENST00000498124 KCNA6P17658 529 aa34.55■■■■□ 3.12
CDKN2A-208ENST00000498124 NUP155O75694 1391 aa34.54■■■■□ 3.12
CDKN2A-208ENST00000498124 TMEM94Q12767 1356 aa34.54■■■■□ 3.12
CDKN2A-208ENST00000498124 PLEKHG1Q9ULL1 1385 aa34.53■■■■□ 3.12
CDKN2A-208ENST00000498124 NKTRP30414 1462 aaKnown RBP34.52■■■■□ 3.12
CDKN2A-208ENST00000498124 SOCS7O14512 581 aa34.52■■■■□ 3.12
CDKN2A-208ENST00000498124 RRBP1Q9P2E9 1410 aaKnown RBP34.52■■■■□ 3.12
CDKN2A-208ENST00000498124 CHD2O14647 1828 aaKnown RBP34.45■■■■□ 3.11
CDKN2A-208ENST00000498124 SENP3Q9H4L4 574 aaPredicted RBP34.44■■■■□ 3.1
CDKN2A-208ENST00000498124 RBM33Q96EV2 1170 aaKnown RBP34.42■■■■□ 3.1
CDKN2A-208ENST00000498124 ADAMTS13Q76LX8 1427 aa34.41■■■■□ 3.1
CDKN2A-208ENST00000498124 PPP1R15AO75807 674 aaPredicted RBP34.41■■■■□ 3.1
CDKN2A-208ENST00000498124 PROSER2Q86WR7 435 aaPredicted RBP34.41■■■■□ 3.1
CDKN2A-208ENST00000498124 BCANQ96GW7 911 aa34.41■■■■□ 3.1
CDKN2A-208ENST00000498124 SPHKAPQ2M3C7 1700 aa34.41■■■■□ 3.1
CDKN2A-208ENST00000498124 CHGAP10645 457 aaKnown RBP34.4■■■■□ 3.1
CDKN2A-208ENST00000498124 FAM135BQ49AJ0 1406 aa34.39■■■■□ 3.1
CDKN2A-208ENST00000498124 DIP2AQ14689 1571 aa34.37■■■■□ 3.09
CDKN2A-208ENST00000498124 HDGFP51858 240 aaKnown RBP34.37■■■■□ 3.09
CDKN2A-208ENST00000498124 ABCF1Q8NE71 845 aaKnown RBP eCLIP34.36■■■■□ 3.09
CDKN2A-208ENST00000498124 NAIPQ13075 1403 aa34.36■■■■□ 3.09
CDKN2A-208ENST00000498124 ROBO1Q9Y6N7 1651 aa34.35■■■■□ 3.09
CDKN2A-208ENST00000498124 NUTM2DQ5VT03 806 aaPredicted RBP34.35■■■■□ 3.09
CDKN2A-208ENST00000498124 TBX22Q9Y458 520 aa34.35■■■■□ 3.09
CDKN2A-208ENST00000498124 NRXN3Q9Y4C0 1643 aa34.29■■■■□ 3.08
CDKN2A-208ENST00000498124 MSH6P52701 1360 aa34.28■■■■□ 3.08
CDKN2A-208ENST00000498124 CLTCL1P53675 1640 aa34.26■■■■□ 3.08
CDKN2A-208ENST00000498124 TRPM2O94759 1503 aa34.26■■■■□ 3.08
CDKN2A-208ENST00000498124 PIK3R4Q99570 1358 aa34.25■■■■□ 3.07
CDKN2A-208ENST00000498124 SETBP1Q9Y6X0 1596 aa34.23■■■■□ 3.07
CDKN2A-208ENST00000498124 HFM1A2PYH4 1435 aa34.22■■■■□ 3.07
CDKN2A-208ENST00000498124 PTPRUQ92729 1446 aa34.21■■■■□ 3.07
CDKN2A-208ENST00000498124 NCOA3Q9Y6Q9 1424 aa34.21■■■■□ 3.07
CDKN2A-208ENST00000498124 PHF23Q9BUL5 403 aaPredicted RBP34.18■■■■□ 3.06
CDKN2A-208ENST00000498124 NEXMIFQ5QGS0 1516 aa34.18■■■■□ 3.06
CDKN2A-208ENST00000498124 XRN1Q8IZH2 1706 aaKnown RBP34.18■■■■□ 3.06
CDKN2A-208ENST00000498124 SLAIN2Q9P270 581 aa34.16■■■■□ 3.06
CDKN2A-208ENST00000498124 SIPA1L2Q9P2F8 1722 aaPredicted RBP34.16■■■■□ 3.06
CDKN2A-208ENST00000498124 PHLPP1O60346 1717 aa34.11■■■■□ 3.05
CDKN2A-208ENST00000498124 KIF1BO60333 1816 aa34.1■■■■□ 3.05
CDKN2A-208ENST00000498124 AMOTL2Q9Y2J4 779 aa34.1■■■■□ 3.05
CDKN2A-208ENST00000498124 ZNF326Q5BKZ1 582 aaKnown RBP34.09■■■■□ 3.05
CDKN2A-208ENST00000498124 RGS17Q9UGC6 210 aaPredicted RBP34.09■■■■□ 3.05
CDKN2A-208ENST00000498124 COL16A1Q07092 1604 aaPredicted RBP34.08■■■■□ 3.05
CDKN2A-208ENST00000498124 METP08581 1390 aa34.07■■■■□ 3.04
CDKN2A-208ENST00000498124 C14orf37Q86TY3 774 aa34.04■■■■□ 3.04
CDKN2A-208ENST00000498124 C19orf44Q9H6X5 657 aa34.04■■■■□ 3.04
CDKN2A-208ENST00000498124 TRIM52Q96A61 297 aa34.02■■■■□ 3.04
CDKN2A-208ENST00000498124 CADPS2Q86UW7 1296 aa34.01■■■■□ 3.03
CDKN2A-208ENST00000498124 AHDC1Q5TGY3 1603 aaPredicted RBP34.01■■■■□ 3.03
CDKN2A-208ENST00000498124 SETD1AO15047 1707 aaKnown RBP33.99■■■■□ 3.03
CDKN2A-208ENST00000498124 DCCP43146 1447 aa33.99■■■■□ 3.03
CDKN2A-208ENST00000498124 ATF3P18847 181 aa33.97■■■■□ 3.03
CDKN2A-208ENST00000498124 JCADQ9P266 1359 aa33.97■■■■□ 3.03
CDKN2A-208ENST00000498124 SLC4A1APQ9BWU0 796 aaKnown RBP33.96■■■■□ 3.03
CDKN2A-208ENST00000498124 NALCNQ8IZF0 1738 aa33.92■■■■□ 3.02
CDKN2A-208ENST00000498124 PPLO60437 1756 aa33.92■■■■□ 3.02
CDKN2A-208ENST00000498124 MST1RQ04912 1400 aa33.91■■■■□ 3.02
CDKN2A-208ENST00000498124 ADGRL3Q9HAR2 1447 aa33.89■■■■□ 3.02
CDKN2A-208ENST00000498124 ASXL1Q8IXJ9 1541 aa33.89■■■■□ 3.02
CDKN2A-208ENST00000498124 BRINP3Q76B58 766 aa33.88■■■■□ 3.01
CDKN2A-208ENST00000498124 LRP6O75581 1613 aa33.87■■■■□ 3.01
CDKN2A-208ENST00000498124 FOXD1Q16676 465 aa33.87■■■■□ 3.01
CDKN2A-208ENST00000498124 SHPRHQ149N8 1683 aa33.87■■■■□ 3.01
CDKN2A-208ENST00000498124 POTEAQ6S8J7 498 aa33.86■■■■□ 3.01
CDKN2A-208ENST00000498124 PTCH1Q13635 1447 aa33.85■■■■□ 3.01
CDKN2A-208ENST00000498124 PRAG1Q86YV5 1406 aa33.85■■■■□ 3.01
CDKN2A-208ENST00000498124 RPGRIP1LQ68CZ1 1315 aa33.84■■■■□ 3.01
CDKN2A-208ENST00000498124 NHSL1Q5SYE7 1610 aa33.83■■■■□ 3.01
CDKN2A-208ENST00000498124 VGFO15240 615 aaPredicted RBP33.83■■■■□ 3.01
CDKN2A-208ENST00000498124 ROBO2Q9HCK4 1378 aa33.8■■■■□ 3
CDKN2A-208ENST00000498124 SPATA31E1Q6ZUB1 1445 aa33.79■■■■□ 3
CDKN2A-208ENST00000498124 SPATA31A6Q5VVP1 1343 aa33.78■■■■□ 3
CDKN2A-208ENST00000498124 CCDC144AA2RUR9 1427 aa33.77■■■■□ 3
CDKN2A-208ENST00000498124 IFT172Q9UG01 1749 aa33.76■■■■□ 3
CDKN2A-208ENST00000498124 MPHOSPH9Q99550 1183 aa33.74■■■□□ 2.99
CDKN2A-208ENST00000498124 SETD5Q9C0A6 1442 aa33.73■■■□□ 2.99
CDKN2A-208ENST00000498124 C1orf167Q5SNV9 1468 aa33.7■■■□□ 2.99
CDKN2A-208ENST00000498124 ADGRF5Q8IZF2 1346 aa33.69■■■□□ 2.98
CDKN2A-208ENST00000498124 LAMC1P11047 1609 aa33.68■■■□□ 2.98
CDKN2A-208ENST00000498124 DDX17Q92841 729 aaKnown RBP33.65■■■□□ 2.98
CDKN2A-208ENST00000498124 ANKRD30BQ9BXX2 1392 aa33.62■■■□□ 2.97
CDKN2A-208ENST00000498124 RGL3Q3MIN7 710 aa33.62■■■□□ 2.97
CDKN2A-208ENST00000498124 TECPR2O15040 1411 aa33.61■■■□□ 2.97
CDKN2A-208ENST00000498124 PIK3C2GO75747 1445 aa33.61■■■□□ 2.97
CDKN2A-208ENST00000498124 CDC42BPGQ6DT37 1551 aa33.6■■■□□ 2.97
CDKN2A-208ENST00000498124 MEX3CQ5U5Q3 659 aaKnown RBP33.6■■■□□ 2.97
CDKN2A-208ENST00000498124 PNPLA6Q8IY17 1366 aa33.59■■■□□ 2.97
CDKN2A-208ENST00000498124 KNDC1Q76NI1 1749 aa33.57■■■□□ 2.96
CDKN2A-208ENST00000498124 LRRC59Q96AG4 307 aaKnown RBP33.56■■■□□ 2.96
CDKN2A-208ENST00000498124 NUTM2BA6NNL0 878 aaPredicted RBP33.55■■■□□ 2.96
CDKN2A-208ENST00000498124 NUTM2EB1AL46 878 aaPredicted RBP33.55■■■□□ 2.96
CDKN2A-208ENST00000498124 NUTM2AQ8IVF1 878 aaPredicted RBP33.55■■■□□ 2.96
CDKN2A-208ENST00000498124 ORAI2Q96SN7 254 aa33.55■■■□□ 2.96
CDKN2A-208ENST00000498124 LRPPRCP42704 1394 aaKnown RBP33.54■■■□□ 2.96
CDKN2A-208ENST00000498124 RAB3GAP2Q9H2M9 1393 aa33.54■■■□□ 2.96
CDKN2A-208ENST00000498124 ZNF772Q68DY9 489 aaPredicted RBP33.52■■■□□ 2.96
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms