RNA–Protein interactions for RNA: ENST00000497750.1

CDKN2A-207, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 4 BASIC

Gene CDKN2A, Length 565 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-207ENST00000497750 XIRP1Q702N8 1843 aaKnown RBP34.76■■■■□ 3.16
CDKN2A-207ENST00000497750 PLEKHG1Q9ULL1 1385 aa34.76■■■■□ 3.16
CDKN2A-207ENST00000497750 KCNA6P17658 529 aa34.75■■■■□ 3.15
CDKN2A-207ENST00000497750 SLC26A8Q96RN1 970 aa34.75■■■■□ 3.15
CDKN2A-207ENST00000497750 NWD1Q149M9 1564 aa34.74■■■■□ 3.15
CDKN2A-207ENST00000497750 HDGFP51858 240 aaKnown RBP34.72■■■■□ 3.15
CDKN2A-207ENST00000497750 NAIPQ13075 1403 aa34.71■■■■□ 3.15
CDKN2A-207ENST00000497750 NKTRP30414 1462 aaKnown RBP34.71■■■■□ 3.15
CDKN2A-207ENST00000497750 TMEM94Q12767 1356 aa34.68■■■■□ 3.14
CDKN2A-207ENST00000497750 ABCF1Q8NE71 845 aaKnown RBP eCLIP34.67■■■■□ 3.14
CDKN2A-207ENST00000497750 ILDR2Q71H61 639 aa34.65■■■■□ 3.14
CDKN2A-207ENST00000497750 PPP1R15AO75807 674 aaPredicted RBP34.64■■■■□ 3.14
CDKN2A-207ENST00000497750 SPHKAPQ2M3C7 1700 aa34.64■■■■□ 3.14
CDKN2A-207ENST00000497750 CHGAP10645 457 aaKnown RBP34.63■■■■□ 3.13
CDKN2A-207ENST00000497750 BCANQ96GW7 911 aa34.61■■■■□ 3.13
CDKN2A-207ENST00000497750 HFM1A2PYH4 1435 aa34.61■■■■□ 3.13
CDKN2A-207ENST00000497750 TBX22Q9Y458 520 aa34.6■■■■□ 3.13
CDKN2A-207ENST00000497750 DIP2AQ14689 1571 aa34.59■■■■□ 3.13
CDKN2A-207ENST00000497750 ADAMTS13Q76LX8 1427 aa34.59■■■■□ 3.13
CDKN2A-207ENST00000497750 CHD2O14647 1828 aaKnown RBP34.59■■■■□ 3.13
CDKN2A-207ENST00000497750 PROSER2Q86WR7 435 aaPredicted RBP34.58■■■■□ 3.13
CDKN2A-207ENST00000497750 MED1Q15648 1581 aaPredicted RBP34.56■■■■□ 3.12
CDKN2A-207ENST00000497750 FAM135BQ49AJ0 1406 aa34.55■■■■□ 3.12
CDKN2A-207ENST00000497750 TRPM2O94759 1503 aa34.53■■■■□ 3.12
CDKN2A-207ENST00000497750 PIK3R4Q99570 1358 aa34.52■■■■□ 3.12
CDKN2A-207ENST00000497750 NUTM2DQ5VT03 806 aaPredicted RBP34.5■■■■□ 3.11
CDKN2A-207ENST00000497750 SENP3Q9H4L4 574 aaPredicted RBP34.5■■■■□ 3.11
CDKN2A-207ENST00000497750 RBM33Q96EV2 1170 aaKnown RBP34.48■■■■□ 3.11
CDKN2A-207ENST00000497750 CLTCL1P53675 1640 aa34.48■■■■□ 3.11
CDKN2A-207ENST00000497750 NCOA3Q9Y6Q9 1424 aa34.47■■■■□ 3.11
CDKN2A-207ENST00000497750 MSH6P52701 1360 aa34.46■■■■□ 3.11
CDKN2A-207ENST00000497750 SETBP1Q9Y6X0 1596 aa34.45■■■■□ 3.1
CDKN2A-207ENST00000497750 SOCS7O14512 581 aa34.43■■■■□ 3.1
CDKN2A-207ENST00000497750 NRXN3Q9Y4C0 1643 aa34.43■■■■□ 3.1
CDKN2A-207ENST00000497750 ROBO1Q9Y6N7 1651 aa34.41■■■■□ 3.1
CDKN2A-207ENST00000497750 NEXMIFQ5QGS0 1516 aa34.39■■■■□ 3.1
CDKN2A-207ENST00000497750 PTPRUQ92729 1446 aa34.37■■■■□ 3.09
CDKN2A-207ENST00000497750 ZNF326Q5BKZ1 582 aaKnown RBP34.36■■■■□ 3.09
CDKN2A-207ENST00000497750 TRIM52Q96A61 297 aa34.36■■■■□ 3.09
CDKN2A-207ENST00000497750 KIF1BO60333 1816 aa34.34■■■■□ 3.09
CDKN2A-207ENST00000497750 SLAIN2Q9P270 581 aa34.33■■■■□ 3.09
CDKN2A-207ENST00000497750 XRN1Q8IZH2 1706 aaKnown RBP34.33■■■■□ 3.09
CDKN2A-207ENST00000497750 SLC4A1APQ9BWU0 796 aaKnown RBP34.32■■■■□ 3.08
CDKN2A-207ENST00000497750 AMOTL2Q9Y2J4 779 aa34.32■■■■□ 3.08
CDKN2A-207ENST00000497750 C19orf44Q9H6X5 657 aa34.27■■■■□ 3.08
CDKN2A-207ENST00000497750 SIPA1L2Q9P2F8 1722 aaPredicted RBP34.26■■■■□ 3.07
CDKN2A-207ENST00000497750 METP08581 1390 aa34.25■■■■□ 3.07
CDKN2A-207ENST00000497750 CADPS2Q86UW7 1296 aa34.23■■■■□ 3.07
CDKN2A-207ENST00000497750 PHF23Q9BUL5 403 aaPredicted RBP34.23■■■■□ 3.07
CDKN2A-207ENST00000497750 C14orf37Q86TY3 774 aa34.22■■■■□ 3.07
CDKN2A-207ENST00000497750 DCCP43146 1447 aa34.21■■■■□ 3.07
CDKN2A-207ENST00000497750 RPGRIP1LQ68CZ1 1315 aa34.2■■■■□ 3.07
CDKN2A-207ENST00000497750 VGFO15240 615 aaPredicted RBP34.17■■■■□ 3.06
CDKN2A-207ENST00000497750 PHLPP1O60346 1717 aa34.17■■■■□ 3.06
CDKN2A-207ENST00000497750 ATF3P18847 181 aa34.17■■■■□ 3.06
CDKN2A-207ENST00000497750 SETD1AO15047 1707 aaKnown RBP34.15■■■■□ 3.06
CDKN2A-207ENST00000497750 COL16A1Q07092 1604 aaPredicted RBP34.14■■■■□ 3.06
CDKN2A-207ENST00000497750 PPLO60437 1756 aa34.13■■■■□ 3.05
CDKN2A-207ENST00000497750 AHDC1Q5TGY3 1603 aaPredicted RBP34.12■■■■□ 3.05
CDKN2A-207ENST00000497750 ACIN1Q9UKV3 1341 aaKnown RBP34.12■■■■□ 3.05
CDKN2A-207ENST00000497750 FOXD1Q16676 465 aa34.11■■■■□ 3.05
CDKN2A-207ENST00000497750 MPHOSPH9Q99550 1183 aa34.11■■■■□ 3.05
CDKN2A-207ENST00000497750 PRAG1Q86YV5 1406 aa34.11■■■■□ 3.05
CDKN2A-207ENST00000497750 CCDC144AA2RUR9 1427 aa34.1■■■■□ 3.05
CDKN2A-207ENST00000497750 JCADQ9P266 1359 aa34.1■■■■□ 3.05
CDKN2A-207ENST00000497750 PTCH1Q13635 1447 aa34.09■■■■□ 3.05
CDKN2A-207ENST00000497750 ADGRL3Q9HAR2 1447 aa34.09■■■■□ 3.05
CDKN2A-207ENST00000497750 RGS17Q9UGC6 210 aaPredicted RBP34.07■■■■□ 3.04
CDKN2A-207ENST00000497750 SPATA31E1Q6ZUB1 1445 aa34.06■■■■□ 3.04
CDKN2A-207ENST00000497750 MST1RQ04912 1400 aa34.05■■■■□ 3.04
CDKN2A-207ENST00000497750 SETD5Q9C0A6 1442 aa34.05■■■■□ 3.04
CDKN2A-207ENST00000497750 BRINP3Q76B58 766 aa34.03■■■■□ 3.04
CDKN2A-207ENST00000497750 NALCNQ8IZF0 1738 aa34.03■■■■□ 3.04
CDKN2A-207ENST00000497750 ASXL1Q8IXJ9 1541 aa34■■■■□ 3.03
CDKN2A-207ENST00000497750 ROBO2Q9HCK4 1378 aa33.98■■■■□ 3.03
CDKN2A-207ENST00000497750 IFT172Q9UG01 1749 aa33.97■■■■□ 3.03
CDKN2A-207ENST00000497750 ANKRD30BQ9BXX2 1392 aa33.97■■■■□ 3.03
CDKN2A-207ENST00000497750 SHPRHQ149N8 1683 aa33.95■■■■□ 3.03
CDKN2A-207ENST00000497750 SPATA31A6Q5VVP1 1343 aa33.95■■■■□ 3.03
CDKN2A-207ENST00000497750 ADGRF5Q8IZF2 1346 aa33.94■■■■□ 3.02
CDKN2A-207ENST00000497750 NHSL1Q5SYE7 1610 aa33.93■■■■□ 3.02
CDKN2A-207ENST00000497750 RAB3GAP2Q9H2M9 1393 aa33.91■■■■□ 3.02
CDKN2A-207ENST00000497750 RGL3Q3MIN7 710 aa33.9■■■■□ 3.02
CDKN2A-207ENST00000497750 LRP6O75581 1613 aa33.9■■■■□ 3.02
CDKN2A-207ENST00000497750 C1orf167Q5SNV9 1468 aa33.88■■■■□ 3.01
CDKN2A-207ENST00000497750 PIK3C2GO75747 1445 aa33.87■■■■□ 3.01
CDKN2A-207ENST00000497750 TECPR2O15040 1411 aa33.87■■■■□ 3.01
CDKN2A-207ENST00000497750 POTEAQ6S8J7 498 aa33.86■■■■□ 3.01
CDKN2A-207ENST00000497750 LAMC1P11047 1609 aa33.83■■■■□ 3.01
CDKN2A-207ENST00000497750 LRPPRCP42704 1394 aaKnown RBP33.81■■■■□ 3
CDKN2A-207ENST00000497750 NRXN1Q9ULB1 1477 aa33.8■■■■□ 3
CDKN2A-207ENST00000497750 CDC42BPGQ6DT37 1551 aa33.79■■■■□ 3
CDKN2A-207ENST00000497750 MYOM2P54296 1465 aa33.78■■■■□ 3
CDKN2A-207ENST00000497750 ABCC11Q96J66 1382 aa33.78■■■■□ 3
CDKN2A-207ENST00000497750 KNDC1Q76NI1 1749 aa33.78■■■■□ 3
CDKN2A-207ENST00000497750 LRRC59Q96AG4 307 aaKnown RBP33.77■■■■□ 3
CDKN2A-207ENST00000497750 HRCP23327 699 aa33.73■■■□□ 2.99
CDKN2A-207ENST00000497750 DDX17Q92841 729 aaKnown RBP33.73■■■□□ 2.99
CDKN2A-207ENST00000497750 MEX3CQ5U5Q3 659 aaKnown RBP33.71■■■□□ 2.99
CDKN2A-207ENST00000497750 PNPLA6Q8IY17 1366 aa33.71■■■□□ 2.99
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms