RNA–Protein interactions for RNA: ENST00000497122.5

SOX2-OT-216, SOX2 overlapping transcript, humanhuman

TSL 4 BASIC

Gene SOX2-OT, Length 578 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-216ENST00000497122 ZNF516Q92618 1163 aa10.61□□□□□ -0.71
SOX2-OT-216ENST00000497122 ADGRG1Q9Y653 693 aa10.6□□□□□ -0.71
SOX2-OT-216ENST00000497122 RBM26Q5T8P6 1007 aaKnown RBP10.58□□□□□ -0.72
SOX2-OT-216ENST00000497122 SMYD5Q6GMV2 418 aa10.58□□□□□ -0.72
SOX2-OT-216ENST00000497122 RCCD1A6NED2 376 aa10.57□□□□□ -0.72
SOX2-OT-216ENST00000497122 PPP1R18Q6NYC8 613 aa10.56□□□□□ -0.72
SOX2-OT-216ENST00000497122 ERICH6Q7L0X2 663 aa10.56□□□□□ -0.72
SOX2-OT-216ENST00000497122 PRR14Q9BWN1 585 aa10.56□□□□□ -0.72
SOX2-OT-216ENST00000497122 PCDHB3Q9Y5E6 796 aa10.56□□□□□ -0.72
SOX2-OT-216ENST00000497122 NKX2-3Q8TAU0 364 aa10.55□□□□□ -0.72
SOX2-OT-216ENST00000497122 ARXQ96QS3 562 aa10.55□□□□□ -0.72
SOX2-OT-216ENST00000497122 TMEM134Q9H6X4 195 aa10.55□□□□□ -0.72
SOX2-OT-216ENST00000497122 TESPA1A2RU30 521 aaPredicted RBP10.54□□□□□ -0.72
SOX2-OT-216ENST00000497122 Q6ZNB5 142 aa10.53□□□□□ -0.72
SOX2-OT-216ENST00000497122 PRKD2Q9BZL6 878 aa10.53□□□□□ -0.72
SOX2-OT-216ENST00000497122 CFHP08603 1231 aa10.52□□□□□ -0.73
SOX2-OT-216ENST00000497122 GGCXP38435 758 aa10.52□□□□□ -0.73
SOX2-OT-216ENST00000497122 HIC1Q14526 733 aa10.52□□□□□ -0.73
SOX2-OT-216ENST00000497122 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.52□□□□□ -0.73
SOX2-OT-216ENST00000497122 TMEM132AQ24JP5 1023 aa10.51□□□□□ -0.73
SOX2-OT-216ENST00000497122 KMT5BQ4FZB7 885 aa10.51□□□□□ -0.73
SOX2-OT-216ENST00000497122 BLOC1S3Q6QNY0 202 aa10.51□□□□□ -0.73
SOX2-OT-216ENST00000497122 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.5□□□□□ -0.73
SOX2-OT-216ENST00000497122 ZPR1O75312 459 aa10.5□□□□□ -0.73
SOX2-OT-216ENST00000497122 OATP04181 439 aa10.5□□□□□ -0.73
SOX2-OT-216ENST00000497122 C14orf37Q86TY3 774 aa10.5□□□□□ -0.73
SOX2-OT-216ENST00000497122 PXYLP1Q8TE99 480 aa10.48□□□□□ -0.73
SOX2-OT-216ENST00000497122 DAXXQ9UER7 740 aaPredicted RBP10.48□□□□□ -0.73
SOX2-OT-216ENST00000497122 GNPATO15228 680 aa10.47□□□□□ -0.73
SOX2-OT-216ENST00000497122 TLL1O43897 1013 aa10.47□□□□□ -0.73
SOX2-OT-216ENST00000497122 GFRA3O60609 400 aa10.46□□□□□ -0.73
SOX2-OT-216ENST00000497122 FECHP22830 423 aa10.46□□□□□ -0.73
SOX2-OT-216ENST00000497122 METTL3Q86U44 580 aaKnown RBP10.46□□□□□ -0.73
SOX2-OT-216ENST00000497122 ACTN4O43707 911 aaKnown RBP10.45□□□□□ -0.74
SOX2-OT-216ENST00000497122 RSPH4AQ5TD94 716 aa10.45□□□□□ -0.74
SOX2-OT-216ENST00000497122 SLC10A3P09131 477 aa10.44□□□□□ -0.74
SOX2-OT-216ENST00000497122 GPIHBP1Q8IV16 184 aa10.44□□□□□ -0.74
SOX2-OT-216ENST00000497122 RDH13Q8NBN7 331 aa10.43□□□□□ -0.74
SOX2-OT-216ENST00000497122 NLRP7Q8WX94 980 aa10.43□□□□□ -0.74
SOX2-OT-216ENST00000497122 LAPTM4AQ15012 233 aa10.42□□□□□ -0.74
SOX2-OT-216ENST00000497122 V9GY48 417 aaPredicted RBP10.42□□□□□ -0.74
SOX2-OT-216ENST00000497122 DDX11L8A8MPP1 907 aa10.4□□□□□ -0.74
SOX2-OT-216ENST00000497122 NR1I2O75469 434 aa10.4□□□□□ -0.74
SOX2-OT-216ENST00000497122 HOMEZQ8IX15 550 aa10.4□□□□□ -0.74
SOX2-OT-216ENST00000497122 TMUB1Q9BVT8 246 aa10.4□□□□□ -0.74
SOX2-OT-216ENST00000497122 GPR37O15354 613 aa10.39□□□□□ -0.75
SOX2-OT-216ENST00000497122 S1PR4O95977 384 aa10.39□□□□□ -0.75
SOX2-OT-216ENST00000497122 PUS10Q3MIT2 529 aaKnown RBP10.39□□□□□ -0.75
SOX2-OT-216ENST00000497122 RNF223E7ERA6 249 aa10.38□□□□□ -0.75
SOX2-OT-216ENST00000497122 PPEF1O14829 653 aaPredicted RBP10.37□□□□□ -0.75
SOX2-OT-216ENST00000497122 PDZRN3Q9UPQ7 1066 aa10.37□□□□□ -0.75
SOX2-OT-216ENST00000497122 NRG2O14511 850 aaPredicted RBP10.35□□□□□ -0.75
SOX2-OT-216ENST00000497122 ADH1BP00325 375 aa10.35□□□□□ -0.75
SOX2-OT-216ENST00000497122 SLC19A1P41440 591 aa10.34□□□□□ -0.75
SOX2-OT-216ENST00000497122 LMOD2Q6P5Q4 547 aa10.34□□□□□ -0.75
SOX2-OT-216ENST00000497122 SULF1Q8IWU6 871 aa10.33□□□□□ -0.76
SOX2-OT-216ENST00000497122 SCUBE3Q8IX30 993 aa10.33□□□□□ -0.76
SOX2-OT-216ENST00000497122 SLC6A16Q9GZN6 736 aa10.33□□□□□ -0.76
SOX2-OT-216ENST00000497122 PHOX2BQ99453 314 aa10.32□□□□□ -0.76
SOX2-OT-216ENST00000497122 FUT2Q10981 343 aa10.31□□□□□ -0.76
SOX2-OT-216ENST00000497122 TRAF7Q6Q0C0 670 aa10.31□□□□□ -0.76
SOX2-OT-216ENST00000497122 ANKLE1Q8NAG6 615 aa10.3□□□□□ -0.76
SOX2-OT-216ENST00000497122 SPSB2Q99619 263 aa10.3□□□□□ -0.76
SOX2-OT-216ENST00000497122 ATP6V1AP38606 617 aa10.27□□□□□ -0.77
SOX2-OT-216ENST00000497122 GCGRP47871 477 aa10.26□□□□□ -0.77
SOX2-OT-216ENST00000497122 MAP2K5Q13163 448 aa10.26□□□□□ -0.77
SOX2-OT-216ENST00000497122 MORN1Q5T089 497 aa10.26□□□□□ -0.77
SOX2-OT-216ENST00000497122 SPRYD7Q5W111 196 aa10.26□□□□□ -0.77
SOX2-OT-216ENST00000497122 ZNF697Q5TEC3 545 aa10.25□□□□□ -0.77
SOX2-OT-216ENST00000497122 LIAT1Q6ZQX7 453 aa10.25□□□□□ -0.77
SOX2-OT-216ENST00000497122 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.25□□□□□ -0.77
SOX2-OT-216ENST00000497122 EMID1Q96A84 441 aaPredicted RBP10.25□□□□□ -0.77
SOX2-OT-216ENST00000497122 LCE2BO14633 110 aa10.24□□□□□ -0.77
SOX2-OT-216ENST00000497122 SLC27A5Q9Y2P5 690 aa10.24□□□□□ -0.77
SOX2-OT-216ENST00000497122 FMNL1O95466 1100 aaPredicted RBP10.23□□□□□ -0.77
SOX2-OT-216ENST00000497122 BRPF1P55201 1214 aaPredicted RBP10.23□□□□□ -0.77
SOX2-OT-216ENST00000497122 PLA2G2CQ5R387 149 aa10.23□□□□□ -0.77
SOX2-OT-216ENST00000497122 ZNF598Q86UK7 904 aaKnown RBP10.23□□□□□ -0.77
SOX2-OT-216ENST00000497122 TNFRSF10AO00220 468 aa10.22□□□□□ -0.77
SOX2-OT-216ENST00000497122 MDM2Q00987 491 aaPredicted RBP10.22□□□□□ -0.77
SOX2-OT-216ENST00000497122 GRIPAP1Q4V328 841 aa10.22□□□□□ -0.77
SOX2-OT-216ENST00000497122 PKDCCQ504Y2 493 aa10.22□□□□□ -0.77
SOX2-OT-216ENST00000497122 SUPT5HO00267 1087 aaKnown RBP10.21□□□□□ -0.77
SOX2-OT-216ENST00000497122 IRF6O14896 467 aa10.21□□□□□ -0.77
SOX2-OT-216ENST00000497122 NEUROD2Q15784 382 aa10.21□□□□□ -0.77
SOX2-OT-216ENST00000497122 TRIM67Q6ZTA4 783 aa10.2□□□□□ -0.78
SOX2-OT-216ENST00000497122 PRDM9Q9NQV7 894 aa10.2□□□□□ -0.78
SOX2-OT-216ENST00000497122 FCF1Q9Y324 198 aaKnown RBP10.2□□□□□ -0.78
SOX2-OT-216ENST00000497122 FOXC1Q12948 553 aa10.19□□□□□ -0.78
SOX2-OT-216ENST00000497122 KRI1Q8N9T8 703 aaKnown RBP10.19□□□□□ -0.78
SOX2-OT-216ENST00000497122 CCDC102AQ96A19 550 aa10.19□□□□□ -0.78
SOX2-OT-216ENST00000497122 THAP11Q96EK4 314 aa10.18□□□□□ -0.78
SOX2-OT-216ENST00000497122 MINK1Q8N4C8 1332 aaPredicted RBP10.17□□□□□ -0.78
SOX2-OT-216ENST00000497122 FAM187AA6NFU0 413 aa10.17□□□□□ -0.78
SOX2-OT-216ENST00000497122 RNF19BQ6ZMZ0 732 aa10.17□□□□□ -0.78
SOX2-OT-216ENST00000497122 CD46P15529 392 aa10.16□□□□□ -0.78
SOX2-OT-216ENST00000497122 FAM160A2Q8N612 972 aaPredicted RBP10.16□□□□□ -0.78
SOX2-OT-216ENST00000497122 KDM4AO75164 1064 aa10.15□□□□□ -0.78
SOX2-OT-216ENST00000497122 BRICD5Q6PL45 260 aa10.15□□□□□ -0.78
SOX2-OT-216ENST00000497122 Q3C1V9 767 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms