RNA–Protein interactions for RNA: ENST00000496959.5

MDM2-220, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 897 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-220ENST00000496959 TMEM134Q9H6X4 195 aa13.41□□□□□ -0.26
MDM2-220ENST00000496959 MAP2K5Q13163 448 aa13.38□□□□□ -0.27
MDM2-220ENST00000496959 MINK1Q8N4C8 1332 aaPredicted RBP13.35□□□□□ -0.27
MDM2-220ENST00000496959 IRF6O14896 467 aa13.33□□□□□ -0.28
MDM2-220ENST00000496959 BCANQ96GW7 911 aa13.33□□□□□ -0.28
MDM2-220ENST00000496959 KRI1Q8N9T8 703 aaKnown RBP13.3□□□□□ -0.28
MDM2-220ENST00000496959 ZC3H15Q8WU90 426 aaKnown RBP13.3□□□□□ -0.28
MDM2-220ENST00000496959 PRR14Q9BWN1 585 aa13.3□□□□□ -0.28
MDM2-220ENST00000496959 DAXXQ9UER7 740 aaPredicted RBP13.3□□□□□ -0.28
MDM2-220ENST00000496959 RSPH4AQ5TD94 716 aa13.29□□□□□ -0.28
MDM2-220ENST00000496959 ITGBL1O95965 494 aaPredicted RBP13.28□□□□□ -0.28
MDM2-220ENST00000496959 APLP1P51693 650 aa13.28□□□□□ -0.28
MDM2-220ENST00000496959 IFFO2Q5TF58 517 aa13.28□□□□□ -0.28
MDM2-220ENST00000496959 PHOX2BQ99453 314 aa13.28□□□□□ -0.28
MDM2-220ENST00000496959 ZMYND10O75800 440 aa13.27□□□□□ -0.29
MDM2-220ENST00000496959 KCNC4Q03721 635 aa13.26□□□□□ -0.29
MDM2-220ENST00000496959 BARGINQ6ZT62 677 aa13.26□□□□□ -0.29
MDM2-220ENST00000496959 CCDC102AQ96A19 550 aa13.26□□□□□ -0.29
MDM2-220ENST00000496959 KMT5BQ4FZB7 885 aa13.25□□□□□ -0.29
MDM2-220ENST00000496959 NLRP7Q8WX94 980 aa13.25□□□□□ -0.29
MDM2-220ENST00000496959 SLC10A3P09131 477 aa13.23□□□□□ -0.29
MDM2-220ENST00000496959 CFHP08603 1231 aa13.22□□□□□ -0.29
MDM2-220ENST00000496959 SULF1Q8IWU6 871 aa13.22□□□□□ -0.29
MDM2-220ENST00000496959 MTRQ99707 1265 aa13.21□□□□□ -0.29
MDM2-220ENST00000496959 IL21Q9HBE4 155 aa13.21□□□□□ -0.29
MDM2-220ENST00000496959 DDX11L8A8MPP1 907 aa13.2□□□□□ -0.3
MDM2-220ENST00000496959 TJAP1Q5JTD0 557 aa13.2□□□□□ -0.3
MDM2-220ENST00000496959 RDH13Q8NBN7 331 aa13.2□□□□□ -0.3
MDM2-220ENST00000496959 PCDHB3Q9Y5E6 796 aa13.2□□□□□ -0.3
MDM2-220ENST00000496959 ACTN4O43707 911 aaKnown RBP13.18□□□□□ -0.3
MDM2-220ENST00000496959 MDM2Q00987 491 aaPredicted RBP13.17□□□□□ -0.3
MDM2-220ENST00000496959 COPS2P61201 443 aa13.16□□□□□ -0.3
MDM2-220ENST00000496959 A0A0G2JS52 829 aa13.14□□□□□ -0.31
MDM2-220ENST00000496959 CLCN1P35523 988 aa13.14□□□□□ -0.31
MDM2-220ENST00000496959 GPCPD1Q9NPB8 672 aa13.13□□□□□ -0.31
MDM2-220ENST00000496959 ZNF516Q92618 1163 aa13.12□□□□□ -0.31
MDM2-220ENST00000496959 BLOC1S3Q6QNY0 202 aa13.11□□□□□ -0.31
MDM2-220ENST00000496959 ZPR1O75312 459 aa13.1□□□□□ -0.31
MDM2-220ENST00000496959 GCGRP47871 477 aa13.1□□□□□ -0.31
MDM2-220ENST00000496959 AK7Q96M32 723 aa13.09□□□□□ -0.31
MDM2-220ENST00000496959 CD46P15529 392 aa13.08□□□□□ -0.32
MDM2-220ENST00000496959 NR1I2O75469 434 aa13.07□□□□□ -0.32
MDM2-220ENST00000496959 AMHR2Q16671 573 aa13.07□□□□□ -0.32
MDM2-220ENST00000496959 TTLL12Q14166 644 aaPredicted RBP13.06□□□□□ -0.32
MDM2-220ENST00000496959 TMUB1Q9BVT8 246 aa13.06□□□□□ -0.32
MDM2-220ENST00000496959 FUT2Q10981 343 aa13.05□□□□□ -0.32
MDM2-220ENST00000496959 FAM217BQ9NTX9 383 aaPredicted RBP13.05□□□□□ -0.32
MDM2-220ENST00000496959 RGS20O76081 388 aa13.04□□□□□ -0.32
MDM2-220ENST00000496959 ATP6V1AP38606 617 aa13.04□□□□□ -0.32
MDM2-220ENST00000496959 PUS10Q3MIT2 529 aaKnown RBP13.04□□□□□ -0.32
MDM2-220ENST00000496959 GRIPAP1Q4V328 841 aa13.04□□□□□ -0.32
MDM2-220ENST00000496959 TRIM66O15016 1216 aa13.03□□□□□ -0.32
MDM2-220ENST00000496959 NKX2-3Q8TAU0 364 aa13.03□□□□□ -0.32
MDM2-220ENST00000496959 REPIN1Q9BWE0 567 aaKnown RBP13.02□□□□□ -0.33
MDM2-220ENST00000496959 SLC24A3Q9HC58 644 aa13.02□□□□□ -0.33
MDM2-220ENST00000496959 SCUBE3Q8IX30 993 aa13.01□□□□□ -0.33
MDM2-220ENST00000496959 KDM4AO75164 1064 aa13□□□□□ -0.33
MDM2-220ENST00000496959 SSTR3P32745 418 aaPredicted RBP13□□□□□ -0.33
MDM2-220ENST00000496959 GGCXP38435 758 aa13□□□□□ -0.33
MDM2-220ENST00000496959 MORN1Q5T089 497 aa13□□□□□ -0.33
MDM2-220ENST00000496959 PPP1R18Q6NYC8 613 aa12.99□□□□□ -0.33
MDM2-220ENST00000496959 TLL1O43897 1013 aa12.98□□□□□ -0.33
MDM2-220ENST00000496959 GIGYF2Q6Y7W6 1299 aaKnown RBP12.98□□□□□ -0.33
MDM2-220ENST00000496959 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.98□□□□□ -0.33
MDM2-220ENST00000496959 USP46P62068 366 aa12.97□□□□□ -0.33
MDM2-220ENST00000496959 ADH1BP00325 375 aa12.95□□□□□ -0.34
MDM2-220ENST00000496959 NUTM1Q86Y26 1132 aa12.95□□□□□ -0.34
MDM2-220ENST00000496959 PARP9Q8IXQ6 854 aa12.95□□□□□ -0.34
MDM2-220ENST00000496959 SLC27A5Q9Y2P5 690 aa12.95□□□□□ -0.34
MDM2-220ENST00000496959 PDE4DQ08499 809 aa12.94□□□□□ -0.34
MDM2-220ENST00000496959 SPSB2Q99619 263 aa12.93□□□□□ -0.34
MDM2-220ENST00000496959 FMNL1O95466 1100 aaPredicted RBP12.92□□□□□ -0.34
MDM2-220ENST00000496959 SALL2Q9Y467 1007 aaPredicted RBP12.91□□□□□ -0.34
MDM2-220ENST00000496959 Q3C1V9 767 aa12.9□□□□□ -0.34
MDM2-220ENST00000496959 SLC6A16Q9GZN6 736 aa12.9□□□□□ -0.34
MDM2-220ENST00000496959 HOXA2O43364 376 aa12.89□□□□□ -0.35
MDM2-220ENST00000496959 THAP11Q96EK4 314 aa12.89□□□□□ -0.35
MDM2-220ENST00000496959 S1PR4O95977 384 aa12.88□□□□□ -0.35
MDM2-220ENST00000496959 BEGAINQ9BUH8 593 aa12.88□□□□□ -0.35
MDM2-220ENST00000496959 BRICD5Q6PL45 260 aa12.87□□□□□ -0.35
MDM2-220ENST00000496959 RNF223E7ERA6 249 aa12.86□□□□□ -0.35
MDM2-220ENST00000496959 MS4A1P11836 297 aa12.85□□□□□ -0.35
MDM2-220ENST00000496959 SPIRE2Q8WWL2 714 aa12.85□□□□□ -0.35
MDM2-220ENST00000496959 DIXDC1Q155Q3 683 aa12.84□□□□□ -0.35
MDM2-220ENST00000496959 RNF19BQ6ZMZ0 732 aa12.84□□□□□ -0.35
MDM2-220ENST00000496959 ANKLE1Q8NAG6 615 aa12.84□□□□□ -0.35
MDM2-220ENST00000496959 HLA-CQ95604 372 aa12.84□□□□□ -0.35
MDM2-220ENST00000496959 PRKD2Q9BZL6 878 aa12.83□□□□□ -0.36
MDM2-220ENST00000496959 PPEF1O14829 653 aaPredicted RBP12.82□□□□□ -0.36
MDM2-220ENST00000496959 V9GY48 417 aaPredicted RBP12.82□□□□□ -0.36
MDM2-220ENST00000496959 GUCA2AQ02747 115 aa12.81□□□□□ -0.36
MDM2-220ENST00000496959 FAM160A2Q8N612 972 aaPredicted RBP12.81□□□□□ -0.36
MDM2-220ENST00000496959 FDX1P10109 184 aa12.8□□□□□ -0.36
MDM2-220ENST00000496959 MSS51Q4VC12 460 aa12.8□□□□□ -0.36
MDM2-220ENST00000496959 USB1Q9BQ65 265 aaKnown RBP12.8□□□□□ -0.36
MDM2-220ENST00000496959 TBC1D2Q9BYX2 928 aa12.79□□□□□ -0.36
MDM2-220ENST00000496959 MOXD2PA6NHM9 499 aa12.78□□□□□ -0.36
MDM2-220ENST00000496959 NDUFV2P19404 249 aa12.77□□□□□ -0.37
MDM2-220ENST00000496959 SLC19A1P41440 591 aa12.75□□□□□ -0.37
MDM2-220ENST00000496959 PRDM9Q9NQV7 894 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms