RNA–Protein interactions for RNA: ENST00000496822.1

NEK4-206, Transcript of NIMA related kinase 4, humanhuman

TSL 3

Gene NEK4, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-206ENST00000496822 NAIPQ13075 1403 aa22.96■■□□□ 1.27
NEK4-206ENST00000496822 SENP3Q9H4L4 574 aaPredicted RBP22.95■■□□□ 1.26
NEK4-206ENST00000496822 XIRP1Q702N8 1843 aaKnown RBP22.94■■□□□ 1.26
NEK4-206ENST00000496822 HSPA1LP34931 641 aa22.94■■□□□ 1.26
NEK4-206ENST00000496822 CHGAP10645 457 aaKnown RBP22.93■■□□□ 1.26
NEK4-206ENST00000496822 PLEKHG1Q9ULL1 1385 aa22.92■■□□□ 1.26
NEK4-206ENST00000496822 NWD1Q149M9 1564 aa22.91■■□□□ 1.26
NEK4-206ENST00000496822 SPHKAPQ2M3C7 1700 aa22.89■■□□□ 1.26
NEK4-206ENST00000496822 PPP1R15AO75807 674 aaPredicted RBP22.89■■□□□ 1.25
NEK4-206ENST00000496822 KCNA6P17658 529 aa22.89■■□□□ 1.25
NEK4-206ENST00000496822 BCANQ96GW7 911 aa22.89■■□□□ 1.25
NEK4-206ENST00000496822 HFM1A2PYH4 1435 aa22.88■■□□□ 1.25
NEK4-206ENST00000496822 TMEM94Q12767 1356 aa22.88■■□□□ 1.25
NEK4-206ENST00000496822 NUTM2DQ5VT03 806 aaPredicted RBP22.87■■□□□ 1.25
NEK4-206ENST00000496822 NKTRP30414 1462 aaKnown RBP22.85■■□□□ 1.25
NEK4-206ENST00000496822 RBM33Q96EV2 1170 aaKnown RBP22.85■■□□□ 1.25
NEK4-206ENST00000496822 ILDR2Q71H61 639 aa22.84■■□□□ 1.25
NEK4-206ENST00000496822 ADAMTS13Q76LX8 1427 aa22.83■■□□□ 1.25
NEK4-206ENST00000496822 HDGFP51858 240 aaKnown RBP22.83■■□□□ 1.25
NEK4-206ENST00000496822 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.83■■□□□ 1.25
NEK4-206ENST00000496822 CLTCL1P53675 1640 aa22.82■■□□□ 1.24
NEK4-206ENST00000496822 PROSER2Q86WR7 435 aaPredicted RBP22.81■■□□□ 1.24
NEK4-206ENST00000496822 TRPM2O94759 1503 aa22.81■■□□□ 1.24
NEK4-206ENST00000496822 CHD2O14647 1828 aaKnown RBP22.8■■□□□ 1.24
NEK4-206ENST00000496822 TBX22Q9Y458 520 aa22.79■■□□□ 1.24
NEK4-206ENST00000496822 DIP2AQ14689 1571 aa22.79■■□□□ 1.24
NEK4-206ENST00000496822 MED1Q15648 1581 aaPredicted RBP22.79■■□□□ 1.24
NEK4-206ENST00000496822 TRIM52Q96A61 297 aa22.77■■□□□ 1.24
NEK4-206ENST00000496822 NRXN3Q9Y4C0 1643 aa22.75■■□□□ 1.23
NEK4-206ENST00000496822 NEXMIFQ5QGS0 1516 aa22.72■■□□□ 1.23
NEK4-206ENST00000496822 SETBP1Q9Y6X0 1596 aa22.72■■□□□ 1.23
NEK4-206ENST00000496822 ZNF326Q5BKZ1 582 aaKnown RBP22.72■■□□□ 1.23
NEK4-206ENST00000496822 MSH6P52701 1360 aa22.72■■□□□ 1.23
NEK4-206ENST00000496822 FAM135BQ49AJ0 1406 aa22.72■■□□□ 1.23
NEK4-206ENST00000496822 PTPRUQ92729 1446 aa22.72■■□□□ 1.23
NEK4-206ENST00000496822 PIK3R4Q99570 1358 aa22.71■■□□□ 1.23
NEK4-206ENST00000496822 SLC4A1APQ9BWU0 796 aaKnown RBP22.7■■□□□ 1.22
NEK4-206ENST00000496822 ROBO1Q9Y6N7 1651 aa22.7■■□□□ 1.22
NEK4-206ENST00000496822 KIF1BO60333 1816 aa22.66■■□□□ 1.22
NEK4-206ENST00000496822 XRN1Q8IZH2 1706 aaKnown RBP22.65■■□□□ 1.22
NEK4-206ENST00000496822 FOXD1Q16676 465 aa22.65■■□□□ 1.22
NEK4-206ENST00000496822 AMOTL2Q9Y2J4 779 aa22.65■■□□□ 1.22
NEK4-206ENST00000496822 NCOA3Q9Y6Q9 1424 aa22.65■■□□□ 1.22
NEK4-206ENST00000496822 METP08581 1390 aa22.64■■□□□ 1.22
NEK4-206ENST00000496822 SLAIN2Q9P270 581 aa22.62■■□□□ 1.21
NEK4-206ENST00000496822 C14orf37Q86TY3 774 aa22.61■■□□□ 1.21
NEK4-206ENST00000496822 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.61■■□□□ 1.21
NEK4-206ENST00000496822 SOCS7O14512 581 aa22.59■■□□□ 1.21
NEK4-206ENST00000496822 MPHOSPH9Q99550 1183 aa22.56■■□□□ 1.2
NEK4-206ENST00000496822 C19orf44Q9H6X5 657 aa22.56■■□□□ 1.2
NEK4-206ENST00000496822 SETD1AO15047 1707 aaKnown RBP22.56■■□□□ 1.2
NEK4-206ENST00000496822 PHF23Q9BUL5 403 aaPredicted RBP22.55■■□□□ 1.2
NEK4-206ENST00000496822 PPLO60437 1756 aa22.55■■□□□ 1.2
NEK4-206ENST00000496822 PHLPP1O60346 1717 aa22.54■■□□□ 1.2
NEK4-206ENST00000496822 CADPS2Q86UW7 1296 aa22.54■■□□□ 1.2
NEK4-206ENST00000496822 CCDC144AA2RUR9 1427 aa22.54■■□□□ 1.2
NEK4-206ENST00000496822 SETD5Q9C0A6 1442 aa22.53■■□□□ 1.2
NEK4-206ENST00000496822 RPGRIP1LQ68CZ1 1315 aa22.53■■□□□ 1.2
NEK4-206ENST00000496822 VGFO15240 615 aaPredicted RBP22.52■■□□□ 1.2
NEK4-206ENST00000496822 ATF3P18847 181 aa22.52■■□□□ 1.2
NEK4-206ENST00000496822 COL16A1Q07092 1604 aaPredicted RBP22.52■■□□□ 1.2
NEK4-206ENST00000496822 DCCP43146 1447 aa22.51■■□□□ 1.19
NEK4-206ENST00000496822 SPATA31E1Q6ZUB1 1445 aa22.5■■□□□ 1.19
NEK4-206ENST00000496822 NALCNQ8IZF0 1738 aa22.49■■□□□ 1.19
NEK4-206ENST00000496822 ADGRL3Q9HAR2 1447 aa22.48■■□□□ 1.19
NEK4-206ENST00000496822 AHDC1Q5TGY3 1603 aaPredicted RBP22.48■■□□□ 1.19
NEK4-206ENST00000496822 RAB3GAP2Q9H2M9 1393 aa22.48■■□□□ 1.19
NEK4-206ENST00000496822 MST1RQ04912 1400 aa22.48■■□□□ 1.19
NEK4-206ENST00000496822 PTCH1Q13635 1447 aa22.48■■□□□ 1.19
NEK4-206ENST00000496822 BRINP3Q76B58 766 aa22.46■■□□□ 1.19
NEK4-206ENST00000496822 RGS17Q9UGC6 210 aaPredicted RBP22.46■■□□□ 1.19
NEK4-206ENST00000496822 ROBO2Q9HCK4 1378 aa22.46■■□□□ 1.19
NEK4-206ENST00000496822 IFT172Q9UG01 1749 aa22.45■■□□□ 1.19
NEK4-206ENST00000496822 RGL3Q3MIN7 710 aa22.45■■□□□ 1.18
NEK4-206ENST00000496822 ADGRF5Q8IZF2 1346 aa22.45■■□□□ 1.18
NEK4-206ENST00000496822 JCADQ9P266 1359 aa22.45■■□□□ 1.18
NEK4-206ENST00000496822 PRAG1Q86YV5 1406 aa22.45■■□□□ 1.18
NEK4-206ENST00000496822 ASXL1Q8IXJ9 1541 aa22.44■■□□□ 1.18
NEK4-206ENST00000496822 ANKRD30BQ9BXX2 1392 aa22.39■■□□□ 1.18
NEK4-206ENST00000496822 ACIN1Q9UKV3 1341 aaKnown RBP22.39■■□□□ 1.18
NEK4-206ENST00000496822 LRP6O75581 1613 aa22.39■■□□□ 1.17
NEK4-206ENST00000496822 NHSL1Q5SYE7 1610 aa22.37■■□□□ 1.17
NEK4-206ENST00000496822 PIK3C2GO75747 1445 aa22.37■■□□□ 1.17
NEK4-206ENST00000496822 SHPRHQ149N8 1683 aa22.36■■□□□ 1.17
NEK4-206ENST00000496822 C1orf167Q5SNV9 1468 aa22.35■■□□□ 1.17
NEK4-206ENST00000496822 DDX17Q92841 729 aaKnown RBP22.34■■□□□ 1.17
NEK4-206ENST00000496822 POTEAQ6S8J7 498 aa22.33■■□□□ 1.17
NEK4-206ENST00000496822 SPATA31A6Q5VVP1 1343 aa22.32■■□□□ 1.16
NEK4-206ENST00000496822 TECPR2O15040 1411 aa22.32■■□□□ 1.16
NEK4-206ENST00000496822 NRXN1Q9ULB1 1477 aa22.31■■□□□ 1.16
NEK4-206ENST00000496822 LRPPRCP42704 1394 aaKnown RBP22.31■■□□□ 1.16
NEK4-206ENST00000496822 TMEM132EQ6IEE7 984 aa22.31■■□□□ 1.16
NEK4-206ENST00000496822 STK26Q9P289 416 aa22.31■■□□□ 1.16
NEK4-206ENST00000496822 CDC42BPGQ6DT37 1551 aa22.3■■□□□ 1.16
NEK4-206ENST00000496822 MYOM2P54296 1465 aa22.3■■□□□ 1.16
NEK4-206ENST00000496822 KNDC1Q76NI1 1749 aa22.29■■□□□ 1.16
NEK4-206ENST00000496822 ORAI2Q96SN7 254 aa22.28■■□□□ 1.16
NEK4-206ENST00000496822 PLEKHH1Q9ULM0 1364 aa22.27■■□□□ 1.16
NEK4-206ENST00000496822 WAPLQ7Z5K2 1190 aa22.27■■□□□ 1.16
NEK4-206ENST00000496822 LAMC1P11047 1609 aa22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms