RNA–Protein interactions for RNA: ENST00000496542.1

FN1-226, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-226ENST00000496542 SENP3Q9H4L4 574 aaPredicted RBP19.77■□□□□ 0.76
FN1-226ENST00000496542 NUP155O75694 1391 aa19.77■□□□□ 0.76
FN1-226ENST00000496542 ZFYVE9O95405 1425 aa19.76■□□□□ 0.75
FN1-226ENST00000496542 CHGAP10645 457 aaKnown RBP19.75■□□□□ 0.75
FN1-226ENST00000496542 RIMS2Q9UQ26 1411 aa19.75■□□□□ 0.75
FN1-226ENST00000496542 PPP1R15AO75807 674 aaPredicted RBP19.74■□□□□ 0.75
FN1-226ENST00000496542 KCNA6P17658 529 aa19.73■□□□□ 0.75
FN1-226ENST00000496542 TMEM94Q12767 1356 aa19.71■□□□□ 0.75
FN1-226ENST00000496542 PLEKHG1Q9ULL1 1385 aa19.71■□□□□ 0.75
FN1-226ENST00000496542 MED1Q15648 1581 aaPredicted RBP19.71■□□□□ 0.75
FN1-226ENST00000496542 RRBP1Q9P2E9 1410 aaKnown RBP19.71■□□□□ 0.75
FN1-226ENST00000496542 NWD1Q149M9 1564 aa19.7■□□□□ 0.74
FN1-226ENST00000496542 NKTRP30414 1462 aaKnown RBP19.69■□□□□ 0.74
FN1-226ENST00000496542 HDGFP51858 240 aaKnown RBP19.69■□□□□ 0.74
FN1-226ENST00000496542 PROSER2Q86WR7 435 aaPredicted RBP19.69■□□□□ 0.74
FN1-226ENST00000496542 RBM33Q96EV2 1170 aaKnown RBP19.68■□□□□ 0.74
FN1-226ENST00000496542 NUTM2DQ5VT03 806 aaPredicted RBP19.67■□□□□ 0.74
FN1-226ENST00000496542 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.67■□□□□ 0.74
FN1-226ENST00000496542 SPHKAPQ2M3C7 1700 aa19.67■□□□□ 0.74
FN1-226ENST00000496542 CHD2O14647 1828 aaKnown RBP19.66■□□□□ 0.74
FN1-226ENST00000496542 SOCS7O14512 581 aa19.64■□□□□ 0.73
FN1-226ENST00000496542 NAIPQ13075 1403 aa19.63■□□□□ 0.73
FN1-226ENST00000496542 DIP2AQ14689 1571 aa19.61■□□□□ 0.73
FN1-226ENST00000496542 ADAMTS13Q76LX8 1427 aa19.61■□□□□ 0.73
FN1-226ENST00000496542 TBX22Q9Y458 520 aa19.61■□□□□ 0.73
FN1-226ENST00000496542 MSH6P52701 1360 aa19.6■□□□□ 0.73
FN1-226ENST00000496542 FAM135BQ49AJ0 1406 aa19.59■□□□□ 0.73
FN1-226ENST00000496542 ROBO1Q9Y6N7 1651 aa19.59■□□□□ 0.73
FN1-226ENST00000496542 PHF23Q9BUL5 403 aaPredicted RBP19.58■□□□□ 0.72
FN1-226ENST00000496542 CLTCL1P53675 1640 aa19.58■□□□□ 0.72
FN1-226ENST00000496542 ZNF326Q5BKZ1 582 aaKnown RBP19.57■□□□□ 0.72
FN1-226ENST00000496542 TRPM2O94759 1503 aa19.56■□□□□ 0.72
FN1-226ENST00000496542 HFM1A2PYH4 1435 aa19.56■□□□□ 0.72
FN1-226ENST00000496542 TRIM52Q96A61 297 aa19.55■□□□□ 0.72
FN1-226ENST00000496542 PIK3R4Q99570 1358 aa19.55■□□□□ 0.72
FN1-226ENST00000496542 C14orf37Q86TY3 774 aa19.54■□□□□ 0.72
FN1-226ENST00000496542 NRXN3Q9Y4C0 1643 aa19.54■□□□□ 0.72
FN1-226ENST00000496542 KIF1BO60333 1816 aa19.53■□□□□ 0.72
FN1-226ENST00000496542 SETBP1Q9Y6X0 1596 aa19.52■□□□□ 0.71
FN1-226ENST00000496542 SLAIN2Q9P270 581 aa19.51■□□□□ 0.71
FN1-226ENST00000496542 PTPRUQ92729 1446 aa19.51■□□□□ 0.71
FN1-226ENST00000496542 NCOA3Q9Y6Q9 1424 aa19.51■□□□□ 0.71
FN1-226ENST00000496542 AMOTL2Q9Y2J4 779 aa19.5■□□□□ 0.71
FN1-226ENST00000496542 NEXMIFQ5QGS0 1516 aa19.5■□□□□ 0.71
FN1-226ENST00000496542 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.49■□□□□ 0.71
FN1-226ENST00000496542 PHLPP1O60346 1717 aa19.48■□□□□ 0.71
FN1-226ENST00000496542 XRN1Q8IZH2 1706 aaKnown RBP19.48■□□□□ 0.71
FN1-226ENST00000496542 SLC4A1APQ9BWU0 796 aaKnown RBP19.47■□□□□ 0.71
FN1-226ENST00000496542 ATF3P18847 181 aa19.45■□□□□ 0.7
FN1-226ENST00000496542 METP08581 1390 aa19.44■□□□□ 0.7
FN1-226ENST00000496542 CADPS2Q86UW7 1296 aa19.44■□□□□ 0.7
FN1-226ENST00000496542 C19orf44Q9H6X5 657 aa19.44■□□□□ 0.7
FN1-226ENST00000496542 COL16A1Q07092 1604 aaPredicted RBP19.4■□□□□ 0.7
FN1-226ENST00000496542 FOXD1Q16676 465 aa19.4■□□□□ 0.7
FN1-226ENST00000496542 RGS17Q9UGC6 210 aaPredicted RBP19.39■□□□□ 0.69
FN1-226ENST00000496542 JCADQ9P266 1359 aa19.39■□□□□ 0.69
FN1-226ENST00000496542 PPLO60437 1756 aa19.38■□□□□ 0.69
FN1-226ENST00000496542 DCCP43146 1447 aa19.38■□□□□ 0.69
FN1-226ENST00000496542 AHDC1Q5TGY3 1603 aaPredicted RBP19.37■□□□□ 0.69
FN1-226ENST00000496542 VGFO15240 615 aaPredicted RBP19.37■□□□□ 0.69
FN1-226ENST00000496542 SETD1AO15047 1707 aaKnown RBP19.37■□□□□ 0.69
FN1-226ENST00000496542 RPGRIP1LQ68CZ1 1315 aa19.35■□□□□ 0.69
FN1-226ENST00000496542 NALCNQ8IZF0 1738 aa19.35■□□□□ 0.69
FN1-226ENST00000496542 ADGRL3Q9HAR2 1447 aa19.34■□□□□ 0.69
FN1-226ENST00000496542 BRINP3Q76B58 766 aa19.34■□□□□ 0.69
FN1-226ENST00000496542 CCDC144AA2RUR9 1427 aa19.34■□□□□ 0.69
FN1-226ENST00000496542 MST1RQ04912 1400 aa19.34■□□□□ 0.69
FN1-226ENST00000496542 ASXL1Q8IXJ9 1541 aa19.33■□□□□ 0.68
FN1-226ENST00000496542 MPHOSPH9Q99550 1183 aa19.32■□□□□ 0.68
FN1-226ENST00000496542 PTCH1Q13635 1447 aa19.31■□□□□ 0.68
FN1-226ENST00000496542 SHPRHQ149N8 1683 aa19.3■□□□□ 0.68
FN1-226ENST00000496542 POTEAQ6S8J7 498 aa19.3■□□□□ 0.68
FN1-226ENST00000496542 ROBO2Q9HCK4 1378 aa19.29■□□□□ 0.68
FN1-226ENST00000496542 LRP6O75581 1613 aa19.29■□□□□ 0.68
FN1-226ENST00000496542 RGL3Q3MIN7 710 aa19.28■□□□□ 0.68
FN1-226ENST00000496542 NHSL1Q5SYE7 1610 aa19.28■□□□□ 0.68
FN1-226ENST00000496542 SPATA31A6Q5VVP1 1343 aa19.27■□□□□ 0.68
FN1-226ENST00000496542 SPATA31E1Q6ZUB1 1445 aa19.27■□□□□ 0.68
FN1-226ENST00000496542 SETD5Q9C0A6 1442 aa19.27■□□□□ 0.68
FN1-226ENST00000496542 MEX3CQ5U5Q3 659 aaKnown RBP19.27■□□□□ 0.68
FN1-226ENST00000496542 IFT172Q9UG01 1749 aa19.26■□□□□ 0.67
FN1-226ENST00000496542 ADGRF5Q8IZF2 1346 aa19.25■□□□□ 0.67
FN1-226ENST00000496542 PRAG1Q86YV5 1406 aa19.25■□□□□ 0.67
FN1-226ENST00000496542 C1orf167Q5SNV9 1468 aa19.23■□□□□ 0.67
FN1-226ENST00000496542 ANKRD30BQ9BXX2 1392 aa19.23■□□□□ 0.67
FN1-226ENST00000496542 DDX17Q92841 729 aaKnown RBP19.23■□□□□ 0.67
FN1-226ENST00000496542 NUTM2BA6NNL0 878 aaPredicted RBP19.22■□□□□ 0.67
FN1-226ENST00000496542 NUTM2EB1AL46 878 aaPredicted RBP19.22■□□□□ 0.67
FN1-226ENST00000496542 NUTM2AQ8IVF1 878 aaPredicted RBP19.22■□□□□ 0.67
FN1-226ENST00000496542 ACIN1Q9UKV3 1341 aaKnown RBP19.22■□□□□ 0.67
FN1-226ENST00000496542 RAB3GAP2Q9H2M9 1393 aa19.2■□□□□ 0.66
FN1-226ENST00000496542 STK26Q9P289 416 aa19.19■□□□□ 0.66
FN1-226ENST00000496542 PIK3C2GO75747 1445 aa19.18■□□□□ 0.66
FN1-226ENST00000496542 LRRC59Q96AG4 307 aaKnown RBP19.18■□□□□ 0.66
FN1-226ENST00000496542 ORAI2Q96SN7 254 aa19.17■□□□□ 0.66
FN1-226ENST00000496542 CDC42BPGQ6DT37 1551 aa19.17■□□□□ 0.66
FN1-226ENST00000496542 ZNF772Q68DY9 489 aaPredicted RBP19.16■□□□□ 0.66
FN1-226ENST00000496542 KNDC1Q76NI1 1749 aa19.16■□□□□ 0.66
FN1-226ENST00000496542 LRPPRCP42704 1394 aaKnown RBP19.16■□□□□ 0.66
FN1-226ENST00000496542 PNPLA6Q8IY17 1366 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms