RNA–Protein interactions for RNA: ENST00000495360.5

APTX-232, Transcript of aprataxin, humanhuman

TSL 5

Gene APTX, Length 1,313 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-232ENST00000495360 ALKQ9UM73 1620 aa26.18■■□□□ 1.78
APTX-232ENST00000495360 PPP1R15AO75807 674 aaPredicted RBP26.18■■□□□ 1.78
APTX-232ENST00000495360 BCANQ96GW7 911 aa26.18■■□□□ 1.78
APTX-232ENST00000495360 HDGFP51858 240 aaKnown RBP26.16■■□□□ 1.78
APTX-232ENST00000495360 PLEKHG1Q9ULL1 1385 aa26.15■■□□□ 1.78
APTX-232ENST00000495360 SENP3Q9H4L4 574 aaPredicted RBP26.14■■□□□ 1.78
APTX-232ENST00000495360 DISP3Q9P2K9 1392 aa26.14■■□□□ 1.78
APTX-232ENST00000495360 HFM1A2PYH4 1435 aa26.14■■□□□ 1.77
APTX-232ENST00000495360 KCNA6P17658 529 aa26.14■■□□□ 1.77
APTX-232ENST00000495360 SPHKAPQ2M3C7 1700 aa26.13■■□□□ 1.77
APTX-232ENST00000495360 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.13■■□□□ 1.77
APTX-232ENST00000495360 HSPA1LP34931 641 aa26.12■■□□□ 1.77
APTX-232ENST00000495360 NWD1Q149M9 1564 aa26.11■■□□□ 1.77
APTX-232ENST00000495360 XIRP1Q702N8 1843 aaKnown RBP26.1■■□□□ 1.77
APTX-232ENST00000495360 NKTRP30414 1462 aaKnown RBP26.08■■□□□ 1.77
APTX-232ENST00000495360 TMEM94Q12767 1356 aa26.08■■□□□ 1.77
APTX-232ENST00000495360 NUTM2DQ5VT03 806 aaPredicted RBP26.08■■□□□ 1.77
APTX-232ENST00000495360 PROSER2Q86WR7 435 aaPredicted RBP26.06■■□□□ 1.76
APTX-232ENST00000495360 TRIM52Q96A61 297 aa26.06■■□□□ 1.76
APTX-232ENST00000495360 TRPM2O94759 1503 aa26.04■■□□□ 1.76
APTX-232ENST00000495360 TBX22Q9Y458 520 aa26.03■■□□□ 1.76
APTX-232ENST00000495360 DIP2AQ14689 1571 aa26.03■■□□□ 1.76
APTX-232ENST00000495360 CLTCL1P53675 1640 aa26.03■■□□□ 1.76
APTX-232ENST00000495360 ADAMTS13Q76LX8 1427 aa26.02■■□□□ 1.76
APTX-232ENST00000495360 RBM33Q96EV2 1170 aaKnown RBP26.01■■□□□ 1.75
APTX-232ENST00000495360 CHD2O14647 1828 aaKnown RBP26■■□□□ 1.75
APTX-232ENST00000495360 ZNF326Q5BKZ1 582 aaKnown RBP25.99■■□□□ 1.75
APTX-232ENST00000495360 SLC4A1APQ9BWU0 796 aaKnown RBP25.96■■□□□ 1.75
APTX-232ENST00000495360 PIK3R4Q99570 1358 aa25.95■■□□□ 1.74
APTX-232ENST00000495360 MSH6P52701 1360 aa25.94■■□□□ 1.74
APTX-232ENST00000495360 MED1Q15648 1581 aaPredicted RBP25.92■■□□□ 1.74
APTX-232ENST00000495360 SETBP1Q9Y6X0 1596 aa25.92■■□□□ 1.74
APTX-232ENST00000495360 KIF1BO60333 1816 aa25.92■■□□□ 1.74
APTX-232ENST00000495360 ILDR2Q71H61 639 aa25.91■■□□□ 1.74
APTX-232ENST00000495360 NEXMIFQ5QGS0 1516 aa25.91■■□□□ 1.74
APTX-232ENST00000495360 NRXN3Q9Y4C0 1643 aa25.91■■□□□ 1.74
APTX-232ENST00000495360 FAM135BQ49AJ0 1406 aa25.91■■□□□ 1.74
APTX-232ENST00000495360 NCOA3Q9Y6Q9 1424 aa25.87■■□□□ 1.73
APTX-232ENST00000495360 PTPRUQ92729 1446 aa25.86■■□□□ 1.73
APTX-232ENST00000495360 ROBO1Q9Y6N7 1651 aa25.86■■□□□ 1.73
APTX-232ENST00000495360 C14orf37Q86TY3 774 aa25.86■■□□□ 1.73
APTX-232ENST00000495360 AMOTL2Q9Y2J4 779 aa25.86■■□□□ 1.73
APTX-232ENST00000495360 FOXD1Q16676 465 aa25.84■■□□□ 1.73
APTX-232ENST00000495360 XRN1Q8IZH2 1706 aaKnown RBP25.83■■□□□ 1.72
APTX-232ENST00000495360 METP08581 1390 aa25.81■■□□□ 1.72
APTX-232ENST00000495360 SLAIN2Q9P270 581 aa25.81■■□□□ 1.72
APTX-232ENST00000495360 MPHOSPH9Q99550 1183 aa25.79■■□□□ 1.72
APTX-232ENST00000495360 VGFO15240 615 aaPredicted RBP25.78■■□□□ 1.72
APTX-232ENST00000495360 RPGRIP1LQ68CZ1 1315 aa25.78■■□□□ 1.72
APTX-232ENST00000495360 SETD5Q9C0A6 1442 aa25.78■■□□□ 1.72
APTX-232ENST00000495360 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.78■■□□□ 1.72
APTX-232ENST00000495360 C19orf44Q9H6X5 657 aa25.77■■□□□ 1.72
APTX-232ENST00000495360 CCDC144AA2RUR9 1427 aa25.77■■□□□ 1.72
APTX-232ENST00000495360 ATF3P18847 181 aa25.75■■□□□ 1.71
APTX-232ENST00000495360 CADPS2Q86UW7 1296 aa25.75■■□□□ 1.71
APTX-232ENST00000495360 ACIN1Q9UKV3 1341 aaKnown RBP25.74■■□□□ 1.71
APTX-232ENST00000495360 PHF23Q9BUL5 403 aaPredicted RBP25.74■■□□□ 1.71
APTX-232ENST00000495360 PPLO60437 1756 aa25.74■■□□□ 1.71
APTX-232ENST00000495360 PHLPP1O60346 1717 aa25.71■■□□□ 1.71
APTX-232ENST00000495360 SETD1AO15047 1707 aaKnown RBP25.7■■□□□ 1.71
APTX-232ENST00000495360 SOCS7O14512 581 aa25.7■■□□□ 1.71
APTX-232ENST00000495360 DCCP43146 1447 aa25.7■■□□□ 1.7
APTX-232ENST00000495360 RAB3GAP2Q9H2M9 1393 aa25.69■■□□□ 1.7
APTX-232ENST00000495360 SPATA31E1Q6ZUB1 1445 aa25.67■■□□□ 1.7
APTX-232ENST00000495360 RGL3Q3MIN7 710 aa25.66■■□□□ 1.7
APTX-232ENST00000495360 ADGRL3Q9HAR2 1447 aa25.66■■□□□ 1.7
APTX-232ENST00000495360 PTCH1Q13635 1447 aa25.64■■□□□ 1.7
APTX-232ENST00000495360 COL16A1Q07092 1604 aaPredicted RBP25.63■■□□□ 1.69
APTX-232ENST00000495360 NALCNQ8IZF0 1738 aa25.63■■□□□ 1.69
APTX-232ENST00000495360 AHDC1Q5TGY3 1603 aaPredicted RBP25.62■■□□□ 1.69
APTX-232ENST00000495360 IFT172Q9UG01 1749 aa25.62■■□□□ 1.69
APTX-232ENST00000495360 ANKRD30BQ9BXX2 1392 aa25.62■■□□□ 1.69
APTX-232ENST00000495360 MST1RQ04912 1400 aa25.61■■□□□ 1.69
APTX-232ENST00000495360 ADGRF5Q8IZF2 1346 aa25.61■■□□□ 1.69
APTX-232ENST00000495360 JCADQ9P266 1359 aa25.61■■□□□ 1.69
APTX-232ENST00000495360 ROBO2Q9HCK4 1378 aa25.6■■□□□ 1.69
APTX-232ENST00000495360 PRAG1Q86YV5 1406 aa25.6■■□□□ 1.69
APTX-232ENST00000495360 BRINP3Q76B58 766 aa25.6■■□□□ 1.69
APTX-232ENST00000495360 ASXL1Q8IXJ9 1541 aa25.58■■□□□ 1.68
APTX-232ENST00000495360 PIK3C2GO75747 1445 aa25.54■■□□□ 1.68
APTX-232ENST00000495360 RGS17Q9UGC6 210 aaPredicted RBP25.52■■□□□ 1.68
APTX-232ENST00000495360 NHSL1Q5SYE7 1610 aa25.5■■□□□ 1.67
APTX-232ENST00000495360 C1orf167Q5SNV9 1468 aa25.49■■□□□ 1.67
APTX-232ENST00000495360 SHPRHQ149N8 1683 aa25.49■■□□□ 1.67
APTX-232ENST00000495360 SPATA31A6Q5VVP1 1343 aa25.48■■□□□ 1.67
APTX-232ENST00000495360 STK26Q9P289 416 aa25.48■■□□□ 1.67
APTX-232ENST00000495360 MYOM2P54296 1465 aa25.48■■□□□ 1.67
APTX-232ENST00000495360 LRPPRCP42704 1394 aaKnown RBP25.47■■□□□ 1.67
APTX-232ENST00000495360 TECPR2O15040 1411 aa25.47■■□□□ 1.67
APTX-232ENST00000495360 HRCP23327 699 aa25.46■■□□□ 1.67
APTX-232ENST00000495360 TMEM132EQ6IEE7 984 aa25.46■■□□□ 1.67
APTX-232ENST00000495360 LRP6O75581 1613 aa25.46■■□□□ 1.67
APTX-232ENST00000495360 NRXN1Q9ULB1 1477 aa25.45■■□□□ 1.67
APTX-232ENST00000495360 CDC42BPGQ6DT37 1551 aa25.44■■□□□ 1.66
APTX-232ENST00000495360 KNDC1Q76NI1 1749 aa25.44■■□□□ 1.66
APTX-232ENST00000495360 ABCC11Q96J66 1382 aa25.43■■□□□ 1.66
APTX-232ENST00000495360 LAMC1P11047 1609 aa25.43■■□□□ 1.66
APTX-232ENST00000495360 YTHDC2Q9H6S0 1430 aaKnown RBP25.42■■□□□ 1.66
APTX-232ENST00000495360 DDX17Q92841 729 aaKnown RBP25.42■■□□□ 1.66
APTX-232ENST00000495360 MEX3CQ5U5Q3 659 aaKnown RBP25.4■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms