RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 ADGRB3O60242 1522 aa14.55□□□□□ -0.08
MSH5-218ENST00000494646 IQGAP3Q86VI3 1631 aa14.55□□□□□ -0.08
MSH5-218ENST00000494646 PPP1R15AO75807 674 aaPredicted RBP14.54□□□□□ -0.08
MSH5-218ENST00000494646 HDGFP51858 240 aaKnown RBP14.54□□□□□ -0.08
MSH5-218ENST00000494646 XIRP1Q702N8 1843 aaKnown RBP14.53□□□□□ -0.08
MSH5-218ENST00000494646 RRBP1Q9P2E9 1410 aaKnown RBP14.53□□□□□ -0.08
MSH5-218ENST00000494646 KCNA6P17658 529 aa14.53□□□□□ -0.08
MSH5-218ENST00000494646 TMEM131LA2VDJ0 1609 aa14.52□□□□□ -0.08
MSH5-218ENST00000494646 RIMS2Q9UQ26 1411 aa14.52□□□□□ -0.08
MSH5-218ENST00000494646 ILDR2Q71H61 639 aa14.52□□□□□ -0.09
MSH5-218ENST00000494646 PROSER2Q86WR7 435 aaPredicted RBP14.52□□□□□ -0.09
MSH5-218ENST00000494646 TRIM52Q96A61 297 aa14.51□□□□□ -0.09
MSH5-218ENST00000494646 ALKQ9UM73 1620 aa14.51□□□□□ -0.09
MSH5-218ENST00000494646 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.49□□□□□ -0.09
MSH5-218ENST00000494646 ZFYVE9O95405 1425 aa14.49□□□□□ -0.09
MSH5-218ENST00000494646 NAIPQ13075 1403 aa14.49□□□□□ -0.09
MSH5-218ENST00000494646 TMEM94Q12767 1356 aa14.47□□□□□ -0.09
MSH5-218ENST00000494646 ZNF326Q5BKZ1 582 aaKnown RBP14.47□□□□□ -0.09
MSH5-218ENST00000494646 PLEKHG1Q9ULL1 1385 aa14.47□□□□□ -0.09
MSH5-218ENST00000494646 CHD2O14647 1828 aaKnown RBP14.46□□□□□ -0.09
MSH5-218ENST00000494646 TBX22Q9Y458 520 aa14.46□□□□□ -0.09
MSH5-218ENST00000494646 SPHKAPQ2M3C7 1700 aa14.46□□□□□ -0.1
MSH5-218ENST00000494646 SLC4A1APQ9BWU0 796 aaKnown RBP14.42□□□□□ -0.1
MSH5-218ENST00000494646 ADAMTS13Q76LX8 1427 aa14.41□□□□□ -0.1
MSH5-218ENST00000494646 FOXD1Q16676 465 aa14.4□□□□□ -0.1
MSH5-218ENST00000494646 C14orf37Q86TY3 774 aa14.4□□□□□ -0.1
MSH5-218ENST00000494646 AMOTL2Q9Y2J4 779 aa14.4□□□□□ -0.1
MSH5-218ENST00000494646 KIF1BO60333 1816 aa14.4□□□□□ -0.1
MSH5-218ENST00000494646 HFM1A2PYH4 1435 aa14.4□□□□□ -0.1
MSH5-218ENST00000494646 NWD1Q149M9 1564 aa14.39□□□□□ -0.11
MSH5-218ENST00000494646 MSH6P52701 1360 aa14.38□□□□□ -0.11
MSH5-218ENST00000494646 CLTCL1P53675 1640 aa14.38□□□□□ -0.11
MSH5-218ENST00000494646 SLAIN2Q9P270 581 aa14.38□□□□□ -0.11
MSH5-218ENST00000494646 NKTRP30414 1462 aaKnown RBP14.37□□□□□ -0.11
MSH5-218ENST00000494646 MED1Q15648 1581 aaPredicted RBP14.36□□□□□ -0.11
MSH5-218ENST00000494646 FAM135BQ49AJ0 1406 aa14.36□□□□□ -0.11
MSH5-218ENST00000494646 ROBO1Q9Y6N7 1651 aa14.36□□□□□ -0.11
MSH5-218ENST00000494646 PTPRUQ92729 1446 aa14.35□□□□□ -0.11
MSH5-218ENST00000494646 SOCS7O14512 581 aa14.35□□□□□ -0.11
MSH5-218ENST00000494646 TRPM2O94759 1503 aa14.35□□□□□ -0.11
MSH5-218ENST00000494646 PIK3R4Q99570 1358 aa14.34□□□□□ -0.11
MSH5-218ENST00000494646 MPHOSPH9Q99550 1183 aa14.33□□□□□ -0.12
MSH5-218ENST00000494646 C19orf44Q9H6X5 657 aa14.33□□□□□ -0.12
MSH5-218ENST00000494646 NRXN3Q9Y4C0 1643 aa14.33□□□□□ -0.12
MSH5-218ENST00000494646 DIP2AQ14689 1571 aa14.32□□□□□ -0.12
MSH5-218ENST00000494646 ATF3P18847 181 aa14.32□□□□□ -0.12
MSH5-218ENST00000494646 METP08581 1390 aa14.32□□□□□ -0.12
MSH5-218ENST00000494646 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.32□□□□□ -0.12
MSH5-218ENST00000494646 NEXMIFQ5QGS0 1516 aa14.31□□□□□ -0.12
MSH5-218ENST00000494646 RGL3Q3MIN7 710 aa14.31□□□□□ -0.12
MSH5-218ENST00000494646 VGFO15240 615 aaPredicted RBP14.3□□□□□ -0.12
MSH5-218ENST00000494646 CADPS2Q86UW7 1296 aa14.3□□□□□ -0.12
MSH5-218ENST00000494646 NCOA3Q9Y6Q9 1424 aa14.29□□□□□ -0.12
MSH5-218ENST00000494646 SETBP1Q9Y6X0 1596 aa14.29□□□□□ -0.12
MSH5-218ENST00000494646 PHLPP1O60346 1717 aa14.28□□□□□ -0.12
MSH5-218ENST00000494646 RPGRIP1LQ68CZ1 1315 aa14.27□□□□□ -0.12
MSH5-218ENST00000494646 SETD5Q9C0A6 1442 aa14.26□□□□□ -0.13
MSH5-218ENST00000494646 RGS17Q9UGC6 210 aaPredicted RBP14.26□□□□□ -0.13
MSH5-218ENST00000494646 PPLO60437 1756 aa14.25□□□□□ -0.13
MSH5-218ENST00000494646 XRN1Q8IZH2 1706 aaKnown RBP14.25□□□□□ -0.13
MSH5-218ENST00000494646 CCDC144AA2RUR9 1427 aa14.24□□□□□ -0.13
MSH5-218ENST00000494646 ADGRF5Q8IZF2 1346 aa14.23□□□□□ -0.13
MSH5-218ENST00000494646 BRINP3Q76B58 766 aa14.23□□□□□ -0.13
MSH5-218ENST00000494646 SETD1AO15047 1707 aaKnown RBP14.21□□□□□ -0.13
MSH5-218ENST00000494646 DDX17Q92841 729 aaKnown RBP14.21□□□□□ -0.13
MSH5-218ENST00000494646 STK26Q9P289 416 aa14.21□□□□□ -0.13
MSH5-218ENST00000494646 RAB3GAP2Q9H2M9 1393 aa14.21□□□□□ -0.14
MSH5-218ENST00000494646 JCADQ9P266 1359 aa14.21□□□□□ -0.14
MSH5-218ENST00000494646 TMEM132EQ6IEE7 984 aa14.2□□□□□ -0.14
MSH5-218ENST00000494646 POTEAQ6S8J7 498 aa14.19□□□□□ -0.14
MSH5-218ENST00000494646 ROBO2Q9HCK4 1378 aa14.19□□□□□ -0.14
MSH5-218ENST00000494646 COL16A1Q07092 1604 aaPredicted RBP14.19□□□□□ -0.14
MSH5-218ENST00000494646 NALCNQ8IZF0 1738 aa14.18□□□□□ -0.14
MSH5-218ENST00000494646 MST1RQ04912 1400 aa14.18□□□□□ -0.14
MSH5-218ENST00000494646 SPATA31E1Q6ZUB1 1445 aa14.18□□□□□ -0.14
MSH5-218ENST00000494646 ACIN1Q9UKV3 1341 aaKnown RBP14.17□□□□□ -0.14
MSH5-218ENST00000494646 ADGRL3Q9HAR2 1447 aa14.17□□□□□ -0.14
MSH5-218ENST00000494646 NUTM2BA6NNL0 878 aaPredicted RBP14.17□□□□□ -0.14
MSH5-218ENST00000494646 NUTM2EB1AL46 878 aaPredicted RBP14.17□□□□□ -0.14
MSH5-218ENST00000494646 WAPLQ7Z5K2 1190 aa14.17□□□□□ -0.14
MSH5-218ENST00000494646 NUTM2AQ8IVF1 878 aaPredicted RBP14.17□□□□□ -0.14
MSH5-218ENST00000494646 MEX3CQ5U5Q3 659 aaKnown RBP14.16□□□□□ -0.14
MSH5-218ENST00000494646 ORAI2Q96SN7 254 aa14.16□□□□□ -0.14
MSH5-218ENST00000494646 DCCP43146 1447 aa14.15□□□□□ -0.14
MSH5-218ENST00000494646 IFT172Q9UG01 1749 aa14.15□□□□□ -0.14
MSH5-218ENST00000494646 ANKRD30BQ9BXX2 1392 aa14.15□□□□□ -0.14
MSH5-218ENST00000494646 AHDC1Q5TGY3 1603 aaPredicted RBP14.15□□□□□ -0.14
MSH5-218ENST00000494646 NUTM2FA1L443 756 aa14.14□□□□□ -0.15
MSH5-218ENST00000494646 ASXL1Q8IXJ9 1541 aa14.14□□□□□ -0.15
MSH5-218ENST00000494646 CFAP70Q5T0N1 1121 aa14.13□□□□□ -0.15
MSH5-218ENST00000494646 LRRC59Q96AG4 307 aaKnown RBP14.13□□□□□ -0.15
MSH5-218ENST00000494646 PTCH1Q13635 1447 aa14.13□□□□□ -0.15
MSH5-218ENST00000494646 SPATA31A6Q5VVP1 1343 aa14.13□□□□□ -0.15
MSH5-218ENST00000494646 C1orf167Q5SNV9 1468 aa14.12□□□□□ -0.15
MSH5-218ENST00000494646 KDM2AQ9Y2K7 1162 aa14.12□□□□□ -0.15
MSH5-218ENST00000494646 NHSL1Q5SYE7 1610 aa14.12□□□□□ -0.15
MSH5-218ENST00000494646 SHPRHQ149N8 1683 aa14.11□□□□□ -0.15
MSH5-218ENST00000494646 C14orf93Q9H972 538 aaKnown RBP14.11□□□□□ -0.15
MSH5-218ENST00000494646 LRP6O75581 1613 aa14.11□□□□□ -0.15
MSH5-218ENST00000494646 ESCO1Q5FWF5 840 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms