RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 SLC52A1Q9NWF4 448 aa14.84□□□□□ -0.03
UBR4-216ENST00000494503 TET3O43151 1660 aa14.84□□□□□ -0.03
UBR4-216ENST00000494503 ROBO1Q9Y6N7 1651 aa14.84□□□□□ -0.03
UBR4-216ENST00000494503 ITGAEP38570 1179 aa14.83□□□□□ -0.04
UBR4-216ENST00000494503 C14orf37Q86TY3 774 aa14.83□□□□□ -0.04
UBR4-216ENST00000494503 MSH6P52701 1360 aa14.83□□□□□ -0.04
UBR4-216ENST00000494503 NUTM2DQ5VT03 806 aaPredicted RBP14.81□□□□□ -0.04
UBR4-216ENST00000494503 NKTRP30414 1462 aaKnown RBP14.81□□□□□ -0.04
UBR4-216ENST00000494503 RPRD2Q5VT52 1461 aaKnown RBP14.81□□□□□ -0.04
UBR4-216ENST00000494503 HDGFP51858 240 aaKnown RBP14.8□□□□□ -0.04
UBR4-216ENST00000494503 RIMS2Q9UQ26 1411 aa14.8□□□□□ -0.04
UBR4-216ENST00000494503 NWD1Q149M9 1564 aa14.79□□□□□ -0.04
UBR4-216ENST00000494503 FAM135BQ49AJ0 1406 aa14.79□□□□□ -0.04
UBR4-216ENST00000494503 PHLPP1O60346 1717 aa14.78□□□□□ -0.04
UBR4-216ENST00000494503 UNC13BO14795 1591 aa14.78□□□□□ -0.04
UBR4-216ENST00000494503 TMEM131LA2VDJ0 1609 aa14.77□□□□□ -0.04
UBR4-216ENST00000494503 PPARGC1BQ86YN6 1023 aaKnown RBP14.77□□□□□ -0.05
UBR4-216ENST00000494503 CHD2O14647 1828 aaKnown RBP14.77□□□□□ -0.05
UBR4-216ENST00000494503 E9PCH4 1651 aa14.77□□□□□ -0.05
UBR4-216ENST00000494503 PLEKHG1Q9ULL1 1385 aa14.76□□□□□ -0.05
UBR4-216ENST00000494503 ZFYVE9O95405 1425 aa14.75□□□□□ -0.05
UBR4-216ENST00000494503 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.74□□□□□ -0.05
UBR4-216ENST00000494503 SLAIN2Q9P270 581 aa14.74□□□□□ -0.05
UBR4-216ENST00000494503 NUP155O75694 1391 aa14.73□□□□□ -0.05
UBR4-216ENST00000494503 RGS17Q9UGC6 210 aaPredicted RBP14.73□□□□□ -0.05
UBR4-216ENST00000494503 IQGAP3Q86VI3 1631 aa14.73□□□□□ -0.05
UBR4-216ENST00000494503 ATF3P18847 181 aa14.71□□□□□ -0.05
UBR4-216ENST00000494503 MEX3CQ5U5Q3 659 aaKnown RBP14.71□□□□□ -0.05
UBR4-216ENST00000494503 ZNF326Q5BKZ1 582 aaKnown RBP14.7□□□□□ -0.06
UBR4-216ENST00000494503 ROCK1Q13464 1354 aa14.7□□□□□ -0.06
UBR4-216ENST00000494503 DIP2AQ14689 1571 aa14.69□□□□□ -0.06
UBR4-216ENST00000494503 POTEAQ6S8J7 498 aa14.69□□□□□ -0.06
UBR4-216ENST00000494503 TBX22Q9Y458 520 aa14.69□□□□□ -0.06
UBR4-216ENST00000494503 JCADQ9P266 1359 aa14.69□□□□□ -0.06
UBR4-216ENST00000494503 TRPM2O94759 1503 aa14.68□□□□□ -0.06
UBR4-216ENST00000494503 SETD1AO15047 1707 aaKnown RBP14.68□□□□□ -0.06
UBR4-216ENST00000494503 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.68□□□□□ -0.06
UBR4-216ENST00000494503 SPHKAPQ2M3C7 1700 aa14.67□□□□□ -0.06
UBR4-216ENST00000494503 CADPS2Q86UW7 1296 aa14.67□□□□□ -0.06
UBR4-216ENST00000494503 ADAMTS13Q76LX8 1427 aa14.66□□□□□ -0.06
UBR4-216ENST00000494503 AMOTL2Q9Y2J4 779 aa14.66□□□□□ -0.06
UBR4-216ENST00000494503 COL16A1Q07092 1604 aaPredicted RBP14.66□□□□□ -0.06
UBR4-216ENST00000494503 C19orf44Q9H6X5 657 aa14.64□□□□□ -0.07
UBR4-216ENST00000494503 PIK3R4Q99570 1358 aa14.63□□□□□ -0.07
UBR4-216ENST00000494503 NUTM2BA6NNL0 878 aaPredicted RBP14.63□□□□□ -0.07
UBR4-216ENST00000494503 NUTM2EB1AL46 878 aaPredicted RBP14.63□□□□□ -0.07
UBR4-216ENST00000494503 NUTM2AQ8IVF1 878 aaPredicted RBP14.63□□□□□ -0.07
UBR4-216ENST00000494503 NCOA3Q9Y6Q9 1424 aa14.62□□□□□ -0.07
UBR4-216ENST00000494503 PTPRUQ92729 1446 aa14.6□□□□□ -0.07
UBR4-216ENST00000494503 TRIM52Q96A61 297 aa14.6□□□□□ -0.07
UBR4-216ENST00000494503 SPATA31A6Q5VVP1 1343 aa14.6□□□□□ -0.07
UBR4-216ENST00000494503 KIF1BO60333 1816 aa14.59□□□□□ -0.07
UBR4-216ENST00000494503 LRP6O75581 1613 aa14.59□□□□□ -0.07
UBR4-216ENST00000494503 AHDC1Q5TGY3 1603 aaPredicted RBP14.59□□□□□ -0.07
UBR4-216ENST00000494503 SHPRHQ149N8 1683 aa14.59□□□□□ -0.07
UBR4-216ENST00000494503 NRXN3Q9Y4C0 1643 aa14.59□□□□□ -0.07
UBR4-216ENST00000494503 BRINP3Q76B58 766 aa14.58□□□□□ -0.08
UBR4-216ENST00000494503 CLTCL1P53675 1640 aa14.58□□□□□ -0.08
UBR4-216ENST00000494503 XRN1Q8IZH2 1706 aaKnown RBP14.58□□□□□ -0.08
UBR4-216ENST00000494503 SETBP1Q9Y6X0 1596 aa14.57□□□□□ -0.08
UBR4-216ENST00000494503 ZNF772Q68DY9 489 aaPredicted RBP14.57□□□□□ -0.08
UBR4-216ENST00000494503 ASXL1Q8IXJ9 1541 aa14.56□□□□□ -0.08
UBR4-216ENST00000494503 METP08581 1390 aa14.56□□□□□ -0.08
UBR4-216ENST00000494503 DCCP43146 1447 aa14.55□□□□□ -0.08
UBR4-216ENST00000494503 NEXMIFQ5QGS0 1516 aa14.54□□□□□ -0.08
UBR4-216ENST00000494503 NALCNQ8IZF0 1738 aa14.53□□□□□ -0.08
UBR4-216ENST00000494503 DDX17Q92841 729 aaKnown RBP14.53□□□□□ -0.08
UBR4-216ENST00000494503 MST1RQ04912 1400 aa14.52□□□□□ -0.08
UBR4-216ENST00000494503 NHSL1Q5SYE7 1610 aa14.52□□□□□ -0.09
UBR4-216ENST00000494503 ADGRL3Q9HAR2 1447 aa14.51□□□□□ -0.09
UBR4-216ENST00000494503 RXRBP28702 533 aa14.51□□□□□ -0.09
UBR4-216ENST00000494503 C8orf37Q96NL8 207 aa14.51□□□□□ -0.09
UBR4-216ENST00000494503 AFF2P51816 1311 aa14.5□□□□□ -0.09
UBR4-216ENST00000494503 LRRC59Q96AG4 307 aaKnown RBP14.5□□□□□ -0.09
UBR4-216ENST00000494503 NAIPQ13075 1403 aa14.49□□□□□ -0.09
UBR4-216ENST00000494503 SLC4A1APQ9BWU0 796 aaKnown RBP14.49□□□□□ -0.09
UBR4-216ENST00000494503 RRBP1Q9P2E9 1410 aaKnown RBP14.49□□□□□ -0.09
UBR4-216ENST00000494503 VGFO15240 615 aaPredicted RBP14.48□□□□□ -0.09
UBR4-216ENST00000494503 ADAMTS2O95450 1211 aa14.48□□□□□ -0.09
UBR4-216ENST00000494503 SETD5Q9C0A6 1442 aa14.47□□□□□ -0.09
UBR4-216ENST00000494503 PNPLA6Q8IY17 1366 aa14.45□□□□□ -0.1
UBR4-216ENST00000494503 PPLO60437 1756 aa14.45□□□□□ -0.1
UBR4-216ENST00000494503 C1orf167Q5SNV9 1468 aa14.44□□□□□ -0.1
UBR4-216ENST00000494503 PTCH1Q13635 1447 aa14.44□□□□□ -0.1
UBR4-216ENST00000494503 FOXD1Q16676 465 aa14.44□□□□□ -0.1
UBR4-216ENST00000494503 UPF1Q92900 1129 aaKnown RBP eCLIP14.44□□□□□ -0.1
UBR4-216ENST00000494503 NGLY1Q96IV0 654 aa14.44□□□□□ -0.1
UBR4-216ENST00000494503 ROBO2Q9HCK4 1378 aa14.44□□□□□ -0.1
UBR4-216ENST00000494503 ORAI2Q96SN7 254 aa14.43□□□□□ -0.1
UBR4-216ENST00000494503 QTRT2Q9H974 415 aaKnown RBP14.43□□□□□ -0.1
UBR4-216ENST00000494503 HFM1A2PYH4 1435 aa14.42□□□□□ -0.1
UBR4-216ENST00000494503 RGL3Q3MIN7 710 aa14.41□□□□□ -0.1
UBR4-216ENST00000494503 STK26Q9P289 416 aa14.41□□□□□ -0.1
UBR4-216ENST00000494503 RPGRIP1LQ68CZ1 1315 aa14.41□□□□□ -0.1
UBR4-216ENST00000494503 NUTM2FA1L443 756 aa14.4□□□□□ -0.1
UBR4-216ENST00000494503 ESCO1Q5FWF5 840 aa14.4□□□□□ -0.1
UBR4-216ENST00000494503 CCDC144AA2RUR9 1427 aa14.4□□□□□ -0.1
UBR4-216ENST00000494503 CDK12Q9NYV4 1490 aaPredicted RBP14.39□□□□□ -0.11
UBR4-216ENST00000494503 RBM6P78332 1123 aaKnown RBP14.39□□□□□ -0.11
UBR4-216ENST00000494503 RGS12O14924 1447 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms