RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 TERF2IPQ9NYB0 399 aa9.53□□□□□ -0.88
BRCA1-221ENST00000493795 CCDC39Q9UFE4 941 aa9.53□□□□□ -0.88
BRCA1-221ENST00000493795 EEA1Q15075 1411 aa9.53□□□□□ -0.88
BRCA1-221ENST00000493795 SAFBQ15424 915 aaKnown RBP eCLIP9.53□□□□□ -0.88
BRCA1-221ENST00000493795 RNF20Q5VTR2 975 aa9.53□□□□□ -0.88
BRCA1-221ENST00000493795 PAF1Q8N7H5 531 aa9.53□□□□□ -0.88
BRCA1-221ENST00000493795 INCENPQ9NQS7 918 aa9.53□□□□□ -0.88
BRCA1-221ENST00000493795 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.52□□□□□ -0.88
BRCA1-221ENST00000493795 ERLIN2O94905 339 aa9.52□□□□□ -0.88
BRCA1-221ENST00000493795 NEFHP12036 1026 aa9.52□□□□□ -0.88
BRCA1-221ENST00000493795 CCP110O43303 1012 aa9.52□□□□□ -0.89
BRCA1-221ENST00000493795 PDILTQ8N807 584 aa9.52□□□□□ -0.89
BRCA1-221ENST00000493795 FBXW7Q969H0 707 aa9.52□□□□□ -0.89
BRCA1-221ENST00000493795 CCDC180Q9P1Z9 1646 aa9.52□□□□□ -0.89
BRCA1-221ENST00000493795 CGNL1Q0VF96 1302 aa9.52□□□□□ -0.89
BRCA1-221ENST00000493795 AMPHP49418 695 aa9.52□□□□□ -0.89
BRCA1-221ENST00000493795 SKIDA1Q1XH10 827 aa9.52□□□□□ -0.89
BRCA1-221ENST00000493795 PHLDB1Q86UU1 1377 aa9.52□□□□□ -0.89
BRCA1-221ENST00000493795 KIAA0754O94854 1291 aa9.51□□□□□ -0.89
BRCA1-221ENST00000493795 AXDND1Q5T1B0 1012 aaPredicted RBP9.51□□□□□ -0.89
BRCA1-221ENST00000493795 SCRIBQ14160 1630 aa9.51□□□□□ -0.89
BRCA1-221ENST00000493795 BRMS1Q9HCU9 246 aa9.51□□□□□ -0.89
BRCA1-221ENST00000493795 SEPT7Q16181 437 aaKnown RBP9.51□□□□□ -0.89
BRCA1-221ENST00000493795 CCDC146Q8IYE0 955 aa9.51□□□□□ -0.89
BRCA1-221ENST00000493795 CHMP5Q9NZZ3 219 aa9.51□□□□□ -0.89
BRCA1-221ENST00000493795 GOLGA6L10A6NI86 522 aa9.5□□□□□ -0.89
BRCA1-221ENST00000493795 SMC3Q9UQE7 1217 aa9.5□□□□□ -0.89
BRCA1-221ENST00000493795 ANKRD62A6NC57 917 aa9.5□□□□□ -0.89
BRCA1-221ENST00000493795 EZRP15311 586 aaKnown RBP9.5□□□□□ -0.89
BRCA1-221ENST00000493795 SMARCE1Q969G3 411 aa9.5□□□□□ -0.89
BRCA1-221ENST00000493795 VPS37CA5D8V6 355 aaPredicted RBP9.5□□□□□ -0.89
BRCA1-221ENST00000493795 CT47B1P0C2W7 299 aaPredicted RBP9.5□□□□□ -0.89
BRCA1-221ENST00000493795 WWC2Q6AWC2 1192 aa9.5□□□□□ -0.89
BRCA1-221ENST00000493795 IFIT2P09913 472 aaKnown RBP9.49□□□□□ -0.89
BRCA1-221ENST00000493795 PDE4AP27815 886 aa9.49□□□□□ -0.89
BRCA1-221ENST00000493795 NUCB2P80303 420 aa9.49□□□□□ -0.89
BRCA1-221ENST00000493795 VPS37DQ86XT2 251 aa9.49□□□□□ -0.89
BRCA1-221ENST00000493795 SLC4A3P48751 1232 aa9.49□□□□□ -0.89
BRCA1-221ENST00000493795 SYCP1Q15431 976 aa9.49□□□□□ -0.89
BRCA1-221ENST00000493795 ENOX2Q16206 610 aaKnown RBP9.49□□□□□ -0.89
BRCA1-221ENST00000493795 TTLL5Q6EMB2 1281 aa9.48□□□□□ -0.89
BRCA1-221ENST00000493795 DYDC1Q8WWB3 177 aa9.48□□□□□ -0.89
BRCA1-221ENST00000493795 USP8P40818 1118 aa9.48□□□□□ -0.89
BRCA1-221ENST00000493795 C1orf141Q5JVX7 400 aa9.48□□□□□ -0.89
BRCA1-221ENST00000493795 NGDNQ8NEJ9 315 aaKnown RBP9.48□□□□□ -0.89
BRCA1-221ENST00000493795 RABEP1Q15276 862 aa9.47□□□□□ -0.89
BRCA1-221ENST00000493795 ZKSCAN2Q63HK3 967 aa9.47□□□□□ -0.89
BRCA1-221ENST00000493795 LETM1O95202 739 aaPredicted RBP9.47□□□□□ -0.89
BRCA1-221ENST00000493795 XBP1P17861 261 aa9.47□□□□□ -0.89
BRCA1-221ENST00000493795 FILIP1LQ4L180 1135 aa9.47□□□□□ -0.89
BRCA1-221ENST00000493795 LTV1Q96GA3 475 aaPredicted RBP9.47□□□□□ -0.89
BRCA1-221ENST00000493795 MAGEC2Q9UBF1 373 aaPredicted RBP9.47□□□□□ -0.89
BRCA1-221ENST00000493795 MSH5O43196 834 aa9.47□□□□□ -0.89
BRCA1-221ENST00000493795 TMEM132AQ24JP5 1023 aa9.47□□□□□ -0.89
BRCA1-221ENST00000493795 BCL11BQ9C0K0 894 aaPredicted RBP9.47□□□□□ -0.89
BRCA1-221ENST00000493795 GGT6Q6P531 493 aa9.46□□□□□ -0.89
BRCA1-221ENST00000493795 C9orf78Q9NZ63 289 aaPredicted RBP9.46□□□□□ -0.89
BRCA1-221ENST00000493795 FOSBP53539 338 aa9.46□□□□□ -0.9
BRCA1-221ENST00000493795 PKD2Q13563 968 aa9.46□□□□□ -0.9
BRCA1-221ENST00000493795 NLRP13Q86W25 1043 aa9.46□□□□□ -0.9
BRCA1-221ENST00000493795 PIP4K2AP48426 406 aaPredicted RBP9.45□□□□□ -0.9
BRCA1-221ENST00000493795 TRHP20396 242 aaPredicted RBP9.45□□□□□ -0.9
BRCA1-221ENST00000493795 TTC5Q8N0Z6 440 aa9.45□□□□□ -0.9
BRCA1-221ENST00000493795 INTS3Q68E01 1043 aaKnown RBP9.45□□□□□ -0.9
BRCA1-221ENST00000493795 TXLNBQ8N3L3 684 aa9.45□□□□□ -0.9
BRCA1-221ENST00000493795 ROCK1Q13464 1354 aa9.45□□□□□ -0.9
BRCA1-221ENST00000493795 SMC2O95347 1197 aa9.45□□□□□ -0.9
BRCA1-221ENST00000493795 TAF3Q5VWG9 929 aa9.45□□□□□ -0.9
BRCA1-221ENST00000493795 CLASRPQ8N2M8 674 aaKnown RBP9.45□□□□□ -0.9
BRCA1-221ENST00000493795 DHX8Q14562 1220 aaKnown RBP9.44□□□□□ -0.9
BRCA1-221ENST00000493795 RALYLQ86SE5 291 aaKnown RBP9.44□□□□□ -0.9
BRCA1-221ENST00000493795 NASPP49321 788 aaPredicted RBP9.44□□□□□ -0.9
BRCA1-221ENST00000493795 MRE11P49959 708 aa9.44□□□□□ -0.9
BRCA1-221ENST00000493795 G3BP1Q13283 466 aaKnown RBP eCLIP9.44□□□□□ -0.9
BRCA1-221ENST00000493795 SAMD1Q6SPF0 538 aaPredicted RBP9.44□□□□□ -0.9
BRCA1-221ENST00000493795 SDF4Q9BRK5 362 aa9.44□□□□□ -0.9
BRCA1-221ENST00000493795 SETD5Q9C0A6 1442 aa9.44□□□□□ -0.9
BRCA1-221ENST00000493795 EIF3JO75822 258 aaKnown RBP9.43□□□□□ -0.9
BRCA1-221ENST00000493795 HMGN5P82970 282 aaKnown RBP9.43□□□□□ -0.9
BRCA1-221ENST00000493795 PKNOX2Q96KN3 472 aa9.43□□□□□ -0.9
BRCA1-221ENST00000493795 LUC7LQ9NQ29 371 aaKnown RBP9.43□□□□□ -0.9
BRCA1-221ENST00000493795 FHAD1B1AJZ9 1412 aa9.43□□□□□ -0.9
BRCA1-221ENST00000493795 CDK5RAP3Q96JB5 506 aa9.43□□□□□ -0.9
BRCA1-221ENST00000493795 TRIM5Q9C035 493 aa9.43□□□□□ -0.9
BRCA1-221ENST00000493795 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.43□□□□□ -0.9
BRCA1-221ENST00000493795 ZNHIT6Q9NWK9 470 aaKnown RBP9.43□□□□□ -0.9
BRCA1-221ENST00000493795 ERLIN1O75477 346 aa9.43□□□□□ -0.9
BRCA1-221ENST00000493795 GBP2P32456 591 aaPredicted RBP9.43□□□□□ -0.9
BRCA1-221ENST00000493795 EID1Q9Y6B2 187 aa9.43□□□□□ -0.9
BRCA1-221ENST00000493795 KIF27Q86VH2 1401 aa9.43□□□□□ -0.9
BRCA1-221ENST00000493795 CEP164Q9UPV0 1460 aa9.43□□□□□ -0.9
BRCA1-221ENST00000493795 E9PSI1 815 aa9.43□□□□□ -0.9
BRCA1-221ENST00000493795 ERC2O15083 957 aa9.43□□□□□ -0.9
BRCA1-221ENST00000493795 CCDC181Q5TID7 509 aa9.43□□□□□ -0.9
BRCA1-221ENST00000493795 KIF7Q2M1P5 1343 aa9.43□□□□□ -0.9
BRCA1-221ENST00000493795 CCAR1Q8IX12 1150 aaKnown RBP9.42□□□□□ -0.9
BRCA1-221ENST00000493795 DDX19BQ9UMR2 479 aa9.42□□□□□ -0.9
BRCA1-221ENST00000493795 DDX58O95786 925 aaKnown RBP9.42□□□□□ -0.9
BRCA1-221ENST00000493795 TEFQ10587 303 aa9.42□□□□□ -0.9
BRCA1-221ENST00000493795 GIMAP7Q8NHV1 300 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms