RNA–Protein interactions for RNA: ENST00000492601.2

SGMS1-204, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-204ENST00000492601 ILDR2Q71H61 639 aa26.3■■□□□ 1.8
SGMS1-204ENST00000492601 BCANQ96GW7 911 aa26.3■■□□□ 1.8
SGMS1-204ENST00000492601 CHGAP10645 457 aaKnown RBP26.29■■□□□ 1.8
SGMS1-204ENST00000492601 RRBP1Q9P2E9 1410 aaKnown RBP26.29■■□□□ 1.8
SGMS1-204ENST00000492601 ZFYVE9O95405 1425 aa26.28■■□□□ 1.8
SGMS1-204ENST00000492601 RIMS2Q9UQ26 1411 aa26.27■■□□□ 1.8
SGMS1-204ENST00000492601 PPP1R15AO75807 674 aaPredicted RBP26.25■■□□□ 1.79
SGMS1-204ENST00000492601 SPHKAPQ2M3C7 1700 aa26.25■■□□□ 1.79
SGMS1-204ENST00000492601 KCNA6P17658 529 aa26.24■■□□□ 1.79
SGMS1-204ENST00000492601 CHD2O14647 1828 aaKnown RBP26.23■■□□□ 1.79
SGMS1-204ENST00000492601 TMEM94Q12767 1356 aa26.21■■□□□ 1.79
SGMS1-204ENST00000492601 PLEKHG1Q9ULL1 1385 aa26.21■■□□□ 1.79
SGMS1-204ENST00000492601 NWD1Q149M9 1564 aa26.21■■□□□ 1.79
SGMS1-204ENST00000492601 HDGFP51858 240 aaKnown RBP26.21■■□□□ 1.79
SGMS1-204ENST00000492601 NUTM2DQ5VT03 806 aaPredicted RBP26.2■■□□□ 1.78
SGMS1-204ENST00000492601 PROSER2Q86WR7 435 aaPredicted RBP26.2■■□□□ 1.78
SGMS1-204ENST00000492601 RBM33Q96EV2 1170 aaKnown RBP26.2■■□□□ 1.78
SGMS1-204ENST00000492601 MED1Q15648 1581 aaPredicted RBP26.18■■□□□ 1.78
SGMS1-204ENST00000492601 NKTRP30414 1462 aaKnown RBP26.17■■□□□ 1.78
SGMS1-204ENST00000492601 NAIPQ13075 1403 aa26.16■■□□□ 1.78
SGMS1-204ENST00000492601 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.16■■□□□ 1.78
SGMS1-204ENST00000492601 TBX22Q9Y458 520 aa26.1■■□□□ 1.77
SGMS1-204ENST00000492601 ADAMTS13Q76LX8 1427 aa26.09■■□□□ 1.77
SGMS1-204ENST00000492601 CLTCL1P53675 1640 aa26.09■■□□□ 1.77
SGMS1-204ENST00000492601 KIF1BO60333 1816 aa26.09■■□□□ 1.77
SGMS1-204ENST00000492601 ROBO1Q9Y6N7 1651 aa26.09■■□□□ 1.77
SGMS1-204ENST00000492601 DIP2AQ14689 1571 aa26.08■■□□□ 1.77
SGMS1-204ENST00000492601 HFM1A2PYH4 1435 aa26.06■■□□□ 1.76
SGMS1-204ENST00000492601 SOCS7O14512 581 aa26.05■■□□□ 1.76
SGMS1-204ENST00000492601 ZNF326Q5BKZ1 582 aaKnown RBP26.05■■□□□ 1.76
SGMS1-204ENST00000492601 TRIM52Q96A61 297 aa26.05■■□□□ 1.76
SGMS1-204ENST00000492601 MSH6P52701 1360 aa26.05■■□□□ 1.76
SGMS1-204ENST00000492601 FAM135BQ49AJ0 1406 aa26.05■■□□□ 1.76
SGMS1-204ENST00000492601 TRPM2O94759 1503 aa26.04■■□□□ 1.76
SGMS1-204ENST00000492601 NRXN3Q9Y4C0 1643 aa26.03■■□□□ 1.76
SGMS1-204ENST00000492601 PIK3R4Q99570 1358 aa25.99■■□□□ 1.75
SGMS1-204ENST00000492601 C14orf37Q86TY3 774 aa25.98■■□□□ 1.75
SGMS1-204ENST00000492601 PHF23Q9BUL5 403 aaPredicted RBP25.98■■□□□ 1.75
SGMS1-204ENST00000492601 SETBP1Q9Y6X0 1596 aa25.98■■□□□ 1.75
SGMS1-204ENST00000492601 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.97■■□□□ 1.75
SGMS1-204ENST00000492601 NEXMIFQ5QGS0 1516 aa25.97■■□□□ 1.75
SGMS1-204ENST00000492601 PTPRUQ92729 1446 aa25.97■■□□□ 1.75
SGMS1-204ENST00000492601 SLAIN2Q9P270 581 aa25.96■■□□□ 1.75
SGMS1-204ENST00000492601 AMOTL2Q9Y2J4 779 aa25.96■■□□□ 1.75
SGMS1-204ENST00000492601 PHLPP1O60346 1717 aa25.95■■□□□ 1.74
SGMS1-204ENST00000492601 SLC4A1APQ9BWU0 796 aaKnown RBP25.95■■□□□ 1.74
SGMS1-204ENST00000492601 XRN1Q8IZH2 1706 aaKnown RBP25.94■■□□□ 1.74
SGMS1-204ENST00000492601 NCOA3Q9Y6Q9 1424 aa25.93■■□□□ 1.74
SGMS1-204ENST00000492601 METP08581 1390 aa25.88■■□□□ 1.73
SGMS1-204ENST00000492601 C19orf44Q9H6X5 657 aa25.88■■□□□ 1.73
SGMS1-204ENST00000492601 FOXD1Q16676 465 aa25.87■■□□□ 1.73
SGMS1-204ENST00000492601 PPLO60437 1756 aa25.87■■□□□ 1.73
SGMS1-204ENST00000492601 ATF3P18847 181 aa25.86■■□□□ 1.73
SGMS1-204ENST00000492601 CADPS2Q86UW7 1296 aa25.84■■□□□ 1.73
SGMS1-204ENST00000492601 SETD1AO15047 1707 aaKnown RBP25.83■■□□□ 1.73
SGMS1-204ENST00000492601 COL16A1Q07092 1604 aaPredicted RBP25.82■■□□□ 1.72
SGMS1-204ENST00000492601 VGFO15240 615 aaPredicted RBP25.8■■□□□ 1.72
SGMS1-204ENST00000492601 NALCNQ8IZF0 1738 aa25.79■■□□□ 1.72
SGMS1-204ENST00000492601 RGS17Q9UGC6 210 aaPredicted RBP25.78■■□□□ 1.72
SGMS1-204ENST00000492601 MPHOSPH9Q99550 1183 aa25.77■■□□□ 1.72
SGMS1-204ENST00000492601 RPGRIP1LQ68CZ1 1315 aa25.77■■□□□ 1.72
SGMS1-204ENST00000492601 JCADQ9P266 1359 aa25.76■■□□□ 1.71
SGMS1-204ENST00000492601 DCCP43146 1447 aa25.76■■□□□ 1.71
SGMS1-204ENST00000492601 AHDC1Q5TGY3 1603 aaPredicted RBP25.76■■□□□ 1.71
SGMS1-204ENST00000492601 CCDC144AA2RUR9 1427 aa25.74■■□□□ 1.71
SGMS1-204ENST00000492601 ADGRL3Q9HAR2 1447 aa25.72■■□□□ 1.71
SGMS1-204ENST00000492601 IFT172Q9UG01 1749 aa25.72■■□□□ 1.71
SGMS1-204ENST00000492601 BRINP3Q76B58 766 aa25.72■■□□□ 1.71
SGMS1-204ENST00000492601 MST1RQ04912 1400 aa25.71■■□□□ 1.71
SGMS1-204ENST00000492601 RGL3Q3MIN7 710 aa25.7■■□□□ 1.7
SGMS1-204ENST00000492601 SHPRHQ149N8 1683 aa25.7■■□□□ 1.7
SGMS1-204ENST00000492601 SETD5Q9C0A6 1442 aa25.7■■□□□ 1.7
SGMS1-204ENST00000492601 ASXL1Q8IXJ9 1541 aa25.69■■□□□ 1.7
SGMS1-204ENST00000492601 NHSL1Q5SYE7 1610 aa25.68■■□□□ 1.7
SGMS1-204ENST00000492601 ROBO2Q9HCK4 1378 aa25.68■■□□□ 1.7
SGMS1-204ENST00000492601 PTCH1Q13635 1447 aa25.67■■□□□ 1.7
SGMS1-204ENST00000492601 SPATA31E1Q6ZUB1 1445 aa25.67■■□□□ 1.7
SGMS1-204ENST00000492601 ADGRF5Q8IZF2 1346 aa25.65■■□□□ 1.7
SGMS1-204ENST00000492601 POTEAQ6S8J7 498 aa25.65■■□□□ 1.7
SGMS1-204ENST00000492601 LRP6O75581 1613 aa25.64■■□□□ 1.7
SGMS1-204ENST00000492601 SPATA31A6Q5VVP1 1343 aa25.62■■□□□ 1.69
SGMS1-204ENST00000492601 RAB3GAP2Q9H2M9 1393 aa25.61■■□□□ 1.69
SGMS1-204ENST00000492601 ANKRD30BQ9BXX2 1392 aa25.6■■□□□ 1.69
SGMS1-204ENST00000492601 DDX17Q92841 729 aaKnown RBP25.6■■□□□ 1.69
SGMS1-204ENST00000492601 PRAG1Q86YV5 1406 aa25.6■■□□□ 1.69
SGMS1-204ENST00000492601 ACIN1Q9UKV3 1341 aaKnown RBP25.6■■□□□ 1.69
SGMS1-204ENST00000492601 MEX3CQ5U5Q3 659 aaKnown RBP25.59■■□□□ 1.69
SGMS1-204ENST00000492601 C1orf167Q5SNV9 1468 aa25.58■■□□□ 1.69
SGMS1-204ENST00000492601 STK26Q9P289 416 aa25.56■■□□□ 1.68
SGMS1-204ENST00000492601 NUTM2BA6NNL0 878 aaPredicted RBP25.55■■□□□ 1.68
SGMS1-204ENST00000492601 NUTM2EB1AL46 878 aaPredicted RBP25.55■■□□□ 1.68
SGMS1-204ENST00000492601 NUTM2AQ8IVF1 878 aaPredicted RBP25.55■■□□□ 1.68
SGMS1-204ENST00000492601 KNDC1Q76NI1 1749 aa25.54■■□□□ 1.68
SGMS1-204ENST00000492601 PIK3C2GO75747 1445 aa25.54■■□□□ 1.68
SGMS1-204ENST00000492601 TMEM132EQ6IEE7 984 aa25.53■■□□□ 1.68
SGMS1-204ENST00000492601 LRRC59Q96AG4 307 aaKnown RBP25.52■■□□□ 1.68
SGMS1-204ENST00000492601 ORAI2Q96SN7 254 aa25.52■■□□□ 1.68
SGMS1-204ENST00000492601 LAMC1P11047 1609 aa25.52■■□□□ 1.68
SGMS1-204ENST00000492601 LRPPRCP42704 1394 aaKnown RBP25.5■■□□□ 1.67
SGMS1-204ENST00000492601 CDC42BPGQ6DT37 1551 aa25.5■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms