RNA–Protein interactions for RNA: ENST00000492455.1

HMGB1P30-201, Transcript of high mobility group box 1 pseudogene 30, humanhuman

BASIC

Gene HMGB1P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P30-201ENST00000492455 TRIM67Q6ZTA4 783 aa7.85□□□□□ -1.15
HMGB1P30-201ENST00000492455 ANKLE1Q8NAG6 615 aa7.85□□□□□ -1.15
HMGB1P30-201ENST00000492455 OSBPP22059 807 aa7.84□□□□□ -1.15
HMGB1P30-201ENST00000492455 ZNF697Q5TEC3 545 aa7.84□□□□□ -1.15
HMGB1P30-201ENST00000492455 BLOC1S3Q6QNY0 202 aa7.83□□□□□ -1.16
HMGB1P30-201ENST00000492455 ARIH1Q9Y4X5 557 aaPredicted RBP7.83□□□□□ -1.16
HMGB1P30-201ENST00000492455 KMT5BQ4FZB7 885 aa7.82□□□□□ -1.16
HMGB1P30-201ENST00000492455 TTC13Q8NBP0 860 aa7.82□□□□□ -1.16
HMGB1P30-201ENST00000492455 POTECB2RU33 542 aa7.8□□□□□ -1.16
HMGB1P30-201ENST00000492455 TNFRSF10AO00220 468 aa7.8□□□□□ -1.16
HMGB1P30-201ENST00000492455 TLL1O43897 1013 aa7.8□□□□□ -1.16
HMGB1P30-201ENST00000492455 S1PR4O95977 384 aa7.8□□□□□ -1.16
HMGB1P30-201ENST00000492455 TREML4Q6UXN2 200 aa7.8□□□□□ -1.16
HMGB1P30-201ENST00000492455 BBXQ8WY36 941 aaPredicted RBP7.79□□□□□ -1.16
HMGB1P30-201ENST00000492455 DNAJB2P25686 324 aa7.78□□□□□ -1.16
HMGB1P30-201ENST00000492455 EYA1Q99502 592 aa7.78□□□□□ -1.16
HMGB1P30-201ENST00000492455 PPEF1O14829 653 aaPredicted RBP7.77□□□□□ -1.17
HMGB1P30-201ENST00000492455 NR1I2O75469 434 aa7.77□□□□□ -1.17
HMGB1P30-201ENST00000492455 LIAT1Q6ZQX7 453 aa7.77□□□□□ -1.17
HMGB1P30-201ENST00000492455 EMID1Q96A84 441 aaPredicted RBP7.77□□□□□ -1.17
HMGB1P30-201ENST00000492455 ACTN4O43707 911 aaKnown RBP7.76□□□□□ -1.17
HMGB1P30-201ENST00000492455 GDF9O60383 454 aa7.76□□□□□ -1.17
HMGB1P30-201ENST00000492455 ADH1BP00325 375 aa7.76□□□□□ -1.17
HMGB1P30-201ENST00000492455 SPRYD3Q8NCJ5 442 aa7.76□□□□□ -1.17
HMGB1P30-201ENST00000492455 RBM46Q8TBY0 533 aaKnown RBP7.76□□□□□ -1.17
HMGB1P30-201ENST00000492455 NPDC1Q9NQX5 325 aaPredicted RBP7.76□□□□□ -1.17
HMGB1P30-201ENST00000492455 ST8SIA5O15466 376 aa7.75□□□□□ -1.17
HMGB1P30-201ENST00000492455 LMOD2Q6P5Q4 547 aa7.75□□□□□ -1.17
HMGB1P30-201ENST00000492455 AAASQ9NRG9 546 aa7.75□□□□□ -1.17
HMGB1P30-201ENST00000492455 CFHP08603 1231 aa7.74□□□□□ -1.17
HMGB1P30-201ENST00000492455 SLC6A16Q9GZN6 736 aa7.74□□□□□ -1.17
HMGB1P30-201ENST00000492455 FOXC1Q12948 553 aa7.73□□□□□ -1.17
HMGB1P30-201ENST00000492455 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.73□□□□□ -1.17
HMGB1P30-201ENST00000492455 TMEM134Q9H6X4 195 aa7.72□□□□□ -1.17
HMGB1P30-201ENST00000492455 WFS1O76024 890 aa7.71□□□□□ -1.18
HMGB1P30-201ENST00000492455 STK17AQ9UEE5 414 aa7.71□□□□□ -1.18
HMGB1P30-201ENST00000492455 C11orf95C9JLR9 678 aaPredicted RBP7.7□□□□□ -1.18
HMGB1P30-201ENST00000492455 AXIN1O15169 862 aa7.69□□□□□ -1.18
HMGB1P30-201ENST00000492455 INSM1Q01101 510 aaPredicted RBP7.69□□□□□ -1.18
HMGB1P30-201ENST00000492455 RSPH4AQ5TD94 716 aa7.69□□□□□ -1.18
HMGB1P30-201ENST00000492455 CRIPAKQ8N1N5 446 aa7.69□□□□□ -1.18
HMGB1P30-201ENST00000492455 CTC1Q2NKJ3 1217 aa7.68□□□□□ -1.18
HMGB1P30-201ENST00000492455 LCE2AQ5TA79 106 aaPredicted RBP7.68□□□□□ -1.18
HMGB1P30-201ENST00000492455 CYP4X1Q8N118 509 aa7.68□□□□□ -1.18
HMGB1P30-201ENST00000492455 RCCD1A6NED2 376 aa7.67□□□□□ -1.18
HMGB1P30-201ENST00000492455 CD2BP2O95400 341 aaKnown RBP7.67□□□□□ -1.18
HMGB1P30-201ENST00000492455 ADGRG1Q9Y653 693 aa7.67□□□□□ -1.18
HMGB1P30-201ENST00000492455 RPIAP49247 311 aa7.66□□□□□ -1.18
HMGB1P30-201ENST00000492455 PLA2G2CQ5R387 149 aa7.66□□□□□ -1.18
HMGB1P30-201ENST00000492455 SPSB2Q99619 263 aa7.66□□□□□ -1.18
HMGB1P30-201ENST00000492455 PKD2L1Q9P0L9 805 aa7.66□□□□□ -1.18
HMGB1P30-201ENST00000492455 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.65□□□□□ -1.18
HMGB1P30-201ENST00000492455 SCUBE3Q8IX30 993 aa7.65□□□□□ -1.18
HMGB1P30-201ENST00000492455 GMPR2Q9P2T1 348 aaKnown RBP7.65□□□□□ -1.18
HMGB1P30-201ENST00000492455 AVPP01185 164 aa7.64□□□□□ -1.19
HMGB1P30-201ENST00000492455 PTGDRQ13258 359 aa7.64□□□□□ -1.19
HMGB1P30-201ENST00000492455 NUTM2FA1L443 756 aa7.62□□□□□ -1.19
HMGB1P30-201ENST00000492455 TTC24A2A3L6 582 aaPredicted RBP7.62□□□□□ -1.19
HMGB1P30-201ENST00000492455 SLC10A3P09131 477 aa7.62□□□□□ -1.19
HMGB1P30-201ENST00000492455 CFAP44Q96MT7 982 aa7.62□□□□□ -1.19
HMGB1P30-201ENST00000492455 TOR4AQ9NXH8 423 aa7.62□□□□□ -1.19
HMGB1P30-201ENST00000492455 ZBTB24O43167 697 aaPredicted RBP7.61□□□□□ -1.19
HMGB1P30-201ENST00000492455 WIPF1O43516 503 aa7.61□□□□□ -1.19
HMGB1P30-201ENST00000492455 DACH1Q9UI36 760 aa7.61□□□□□ -1.19
HMGB1P30-201ENST00000492455 FCF1Q9Y324 198 aaKnown RBP7.61□□□□□ -1.19
HMGB1P30-201ENST00000492455 OATP04181 439 aa7.6□□□□□ -1.19
HMGB1P30-201ENST00000492455 SMCPP49901 116 aaPredicted RBP7.6□□□□□ -1.19
HMGB1P30-201ENST00000492455 PUS10Q3MIT2 529 aaKnown RBP7.6□□□□□ -1.19
HMGB1P30-201ENST00000492455 MLLT3P42568 568 aaPredicted RBP7.59□□□□□ -1.19
HMGB1P30-201ENST00000492455 NFX1Q12986 1120 aaKnown RBP7.59□□□□□ -1.19
HMGB1P30-201ENST00000492455 FAM161AQ3B820 660 aa7.59□□□□□ -1.19
HMGB1P30-201ENST00000492455 PAXIP1Q6ZW49 1069 aaPredicted RBP7.59□□□□□ -1.19
HMGB1P30-201ENST00000492455 FAM181BA6NEQ2 426 aa7.58□□□□□ -1.2
HMGB1P30-201ENST00000492455 FCHSD2O94868 740 aa7.58□□□□□ -1.2
HMGB1P30-201ENST00000492455 ARHGEF1Q92888 912 aaKnown RBP7.58□□□□□ -1.2
HMGB1P30-201ENST00000492455 SENP2Q9HC62 589 aa7.58□□□□□ -1.2
HMGB1P30-201ENST00000492455 SLC24A1O60721 1099 aa7.57□□□□□ -1.2
HMGB1P30-201ENST00000492455 FMNL1O95466 1100 aaPredicted RBP7.56□□□□□ -1.2
HMGB1P30-201ENST00000492455 RDH13Q8NBN7 331 aa7.56□□□□□ -1.2
HMGB1P30-201ENST00000492455 ATP13A2Q9NQ11 1180 aa7.55□□□□□ -1.2
HMGB1P30-201ENST00000492455 TERTO14746 1132 aaKnown RBP7.54□□□□□ -1.2
HMGB1P30-201ENST00000492455 SNIP1Q8TAD8 396 aaKnown RBP7.54□□□□□ -1.2
HMGB1P30-201ENST00000492455 PXYLP1Q8TE99 480 aa7.54□□□□□ -1.2
HMGB1P30-201ENST00000492455 KIFC2Q96AC6 838 aa7.54□□□□□ -1.2
HMGB1P30-201ENST00000492455 ATP6V1AP38606 617 aa7.52□□□□□ -1.21
HMGB1P30-201ENST00000492455 MORN1Q5T089 497 aa7.52□□□□□ -1.21
HMGB1P30-201ENST00000492455 SLC16A10Q8TF71 515 aa7.52□□□□□ -1.21
HMGB1P30-201ENST00000492455 TRIM47Q96LD4 638 aa7.52□□□□□ -1.21
HMGB1P30-201ENST00000492455 WNT7AO00755 349 aa7.51□□□□□ -1.21
HMGB1P30-201ENST00000492455 SNRPBP14678 240 aaKnown RBP7.51□□□□□ -1.21
HMGB1P30-201ENST00000492455 FUT2Q10981 343 aa7.51□□□□□ -1.21
HMGB1P30-201ENST00000492455 METTL3Q86U44 580 aaKnown RBP7.5□□□□□ -1.21
HMGB1P30-201ENST00000492455 THAP11Q96EK4 314 aa7.5□□□□□ -1.21
HMGB1P30-201ENST00000492455 REPIN1Q9BWE0 567 aaKnown RBP7.5□□□□□ -1.21
HMGB1P30-201ENST00000492455 SMPD1P17405 629 aa7.49□□□□□ -1.21
HMGB1P30-201ENST00000492455 GRIPAP1Q4V328 841 aa7.49□□□□□ -1.21
HMGB1P30-201ENST00000492455 DAXXQ9UER7 740 aaPredicted RBP7.49□□□□□ -1.21
HMGB1P30-201ENST00000492455 SLC27A5Q9Y2P5 690 aa7.49□□□□□ -1.21
HMGB1P30-201ENST00000492455 SALL2Q9Y467 1007 aaPredicted RBP7.49□□□□□ -1.21
HMGB1P30-201ENST00000492455 DDX11L8A8MPP1 907 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms