RNA–Protein interactions for RNA: ENST00000490869.1

UBA1-209, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

TSL 2

Gene UBA1, Length 917 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-209ENST00000490869 BCANQ96GW7 911 aa16.58■□□□□ 0.24
UBA1-209ENST00000490869 RIMS2Q9UQ26 1411 aa16.58■□□□□ 0.24
UBA1-209ENST00000490869 CHGAP10645 457 aaKnown RBP16.57■□□□□ 0.24
UBA1-209ENST00000490869 PPP1R15AO75807 674 aaPredicted RBP16.56■□□□□ 0.24
UBA1-209ENST00000490869 HDGFP51858 240 aaKnown RBP16.56■□□□□ 0.24
UBA1-209ENST00000490869 XIRP1Q702N8 1843 aaKnown RBP16.56■□□□□ 0.24
UBA1-209ENST00000490869 PLEKHG1Q9ULL1 1385 aa16.55■□□□□ 0.24
UBA1-209ENST00000490869 KCNA6P17658 529 aa16.55■□□□□ 0.24
UBA1-209ENST00000490869 SENP3Q9H4L4 574 aaPredicted RBP16.55■□□□□ 0.24
UBA1-209ENST00000490869 NWD1Q149M9 1564 aa16.53■□□□□ 0.24
UBA1-209ENST00000490869 NAIPQ13075 1403 aa16.53■□□□□ 0.24
UBA1-209ENST00000490869 TMEM94Q12767 1356 aa16.52■□□□□ 0.24
UBA1-209ENST00000490869 ILDR2Q71H61 639 aa16.52■□□□□ 0.24
UBA1-209ENST00000490869 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.52■□□□□ 0.24
UBA1-209ENST00000490869 SPHKAPQ2M3C7 1700 aa16.51■□□□□ 0.23
UBA1-209ENST00000490869 NKTRP30414 1462 aaKnown RBP16.51■□□□□ 0.23
UBA1-209ENST00000490869 PROSER2Q86WR7 435 aaPredicted RBP16.51■□□□□ 0.23
UBA1-209ENST00000490869 NUTM2DQ5VT03 806 aaPredicted RBP16.5■□□□□ 0.23
UBA1-209ENST00000490869 RBM33Q96EV2 1170 aaKnown RBP16.49■□□□□ 0.23
UBA1-209ENST00000490869 MED1Q15648 1581 aaPredicted RBP16.47■□□□□ 0.23
UBA1-209ENST00000490869 HFM1A2PYH4 1435 aa16.47■□□□□ 0.23
UBA1-209ENST00000490869 TBX22Q9Y458 520 aa16.47■□□□□ 0.23
UBA1-209ENST00000490869 CHD2O14647 1828 aaKnown RBP16.47■□□□□ 0.23
UBA1-209ENST00000490869 DIP2AQ14689 1571 aa16.47■□□□□ 0.23
UBA1-209ENST00000490869 ADAMTS13Q76LX8 1427 aa16.46■□□□□ 0.23
UBA1-209ENST00000490869 TRPM2O94759 1503 aa16.45■□□□□ 0.22
UBA1-209ENST00000490869 MSH6P52701 1360 aa16.44■□□□□ 0.22
UBA1-209ENST00000490869 TRIM52Q96A61 297 aa16.44■□□□□ 0.22
UBA1-209ENST00000490869 CLTCL1P53675 1640 aa16.44■□□□□ 0.22
UBA1-209ENST00000490869 ZNF326Q5BKZ1 582 aaKnown RBP16.43■□□□□ 0.22
UBA1-209ENST00000490869 FAM135BQ49AJ0 1406 aa16.43■□□□□ 0.22
UBA1-209ENST00000490869 PIK3R4Q99570 1358 aa16.42■□□□□ 0.22
UBA1-209ENST00000490869 ROBO1Q9Y6N7 1651 aa16.4■□□□□ 0.22
UBA1-209ENST00000490869 NRXN3Q9Y4C0 1643 aa16.4■□□□□ 0.22
UBA1-209ENST00000490869 SETBP1Q9Y6X0 1596 aa16.39■□□□□ 0.21
UBA1-209ENST00000490869 SOCS7O14512 581 aa16.39■□□□□ 0.21
UBA1-209ENST00000490869 NEXMIFQ5QGS0 1516 aa16.39■□□□□ 0.21
UBA1-209ENST00000490869 KIF1BO60333 1816 aa16.38■□□□□ 0.21
UBA1-209ENST00000490869 NCOA3Q9Y6Q9 1424 aa16.38■□□□□ 0.21
UBA1-209ENST00000490869 SLC4A1APQ9BWU0 796 aaKnown RBP16.38■□□□□ 0.21
UBA1-209ENST00000490869 PTPRUQ92729 1446 aa16.37■□□□□ 0.21
UBA1-209ENST00000490869 C14orf37Q86TY3 774 aa16.37■□□□□ 0.21
UBA1-209ENST00000490869 AMOTL2Q9Y2J4 779 aa16.37■□□□□ 0.21
UBA1-209ENST00000490869 PHF23Q9BUL5 403 aaPredicted RBP16.36■□□□□ 0.21
UBA1-209ENST00000490869 SLAIN2Q9P270 581 aa16.36■□□□□ 0.21
UBA1-209ENST00000490869 XRN1Q8IZH2 1706 aaKnown RBP16.34■□□□□ 0.21
UBA1-209ENST00000490869 C19orf44Q9H6X5 657 aa16.33■□□□□ 0.2
UBA1-209ENST00000490869 METP08581 1390 aa16.33■□□□□ 0.2
UBA1-209ENST00000490869 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.33■□□□□ 0.2
UBA1-209ENST00000490869 CADPS2Q86UW7 1296 aa16.32■□□□□ 0.2
UBA1-209ENST00000490869 ATF3P18847 181 aa16.31■□□□□ 0.2
UBA1-209ENST00000490869 FOXD1Q16676 465 aa16.31■□□□□ 0.2
UBA1-209ENST00000490869 PHLPP1O60346 1717 aa16.31■□□□□ 0.2
UBA1-209ENST00000490869 VGFO15240 615 aaPredicted RBP16.29■□□□□ 0.2
UBA1-209ENST00000490869 RPGRIP1LQ68CZ1 1315 aa16.28■□□□□ 0.2
UBA1-209ENST00000490869 DCCP43146 1447 aa16.28■□□□□ 0.2
UBA1-209ENST00000490869 MPHOSPH9Q99550 1183 aa16.27■□□□□ 0.2
UBA1-209ENST00000490869 PPLO60437 1756 aa16.27■□□□□ 0.2
UBA1-209ENST00000490869 CCDC144AA2RUR9 1427 aa16.27■□□□□ 0.19
UBA1-209ENST00000490869 COL16A1Q07092 1604 aaPredicted RBP16.26■□□□□ 0.19
UBA1-209ENST00000490869 SETD1AO15047 1707 aaKnown RBP16.25■□□□□ 0.19
UBA1-209ENST00000490869 JCADQ9P266 1359 aa16.25■□□□□ 0.19
UBA1-209ENST00000490869 SETD5Q9C0A6 1442 aa16.24■□□□□ 0.19
UBA1-209ENST00000490869 AHDC1Q5TGY3 1603 aaPredicted RBP16.23■□□□□ 0.19
UBA1-209ENST00000490869 ADGRL3Q9HAR2 1447 aa16.23■□□□□ 0.19
UBA1-209ENST00000490869 RGS17Q9UGC6 210 aaPredicted RBP16.23■□□□□ 0.19
UBA1-209ENST00000490869 NALCNQ8IZF0 1738 aa16.22■□□□□ 0.19
UBA1-209ENST00000490869 ACIN1Q9UKV3 1341 aaKnown RBP16.22■□□□□ 0.19
UBA1-209ENST00000490869 MST1RQ04912 1400 aa16.22■□□□□ 0.19
UBA1-209ENST00000490869 BRINP3Q76B58 766 aa16.22■□□□□ 0.19
UBA1-209ENST00000490869 PTCH1Q13635 1447 aa16.21■□□□□ 0.19
UBA1-209ENST00000490869 SPATA31E1Q6ZUB1 1445 aa16.21■□□□□ 0.19
UBA1-209ENST00000490869 ASXL1Q8IXJ9 1541 aa16.2■□□□□ 0.18
UBA1-209ENST00000490869 RGL3Q3MIN7 710 aa16.2■□□□□ 0.18
UBA1-209ENST00000490869 ROBO2Q9HCK4 1378 aa16.19■□□□□ 0.18
UBA1-209ENST00000490869 IFT172Q9UG01 1749 aa16.19■□□□□ 0.18
UBA1-209ENST00000490869 PRAG1Q86YV5 1406 aa16.19■□□□□ 0.18
UBA1-209ENST00000490869 ADGRF5Q8IZF2 1346 aa16.19■□□□□ 0.18
UBA1-209ENST00000490869 ANKRD30BQ9BXX2 1392 aa16.18■□□□□ 0.18
UBA1-209ENST00000490869 RAB3GAP2Q9H2M9 1393 aa16.18■□□□□ 0.18
UBA1-209ENST00000490869 SHPRHQ149N8 1683 aa16.17■□□□□ 0.18
UBA1-209ENST00000490869 SPATA31A6Q5VVP1 1343 aa16.17■□□□□ 0.18
UBA1-209ENST00000490869 NHSL1Q5SYE7 1610 aa16.16■□□□□ 0.18
UBA1-209ENST00000490869 LRP6O75581 1613 aa16.15■□□□□ 0.18
UBA1-209ENST00000490869 POTEAQ6S8J7 498 aa16.14■□□□□ 0.17
UBA1-209ENST00000490869 C1orf167Q5SNV9 1468 aa16.14■□□□□ 0.17
UBA1-209ENST00000490869 PIK3C2GO75747 1445 aa16.13■□□□□ 0.17
UBA1-209ENST00000490869 MEX3CQ5U5Q3 659 aaKnown RBP16.12■□□□□ 0.17
UBA1-209ENST00000490869 DDX17Q92841 729 aaKnown RBP16.11■□□□□ 0.17
UBA1-209ENST00000490869 LRRC59Q96AG4 307 aaKnown RBP16.1■□□□□ 0.17
UBA1-209ENST00000490869 STK26Q9P289 416 aa16.1■□□□□ 0.17
UBA1-209ENST00000490869 LRPPRCP42704 1394 aaKnown RBP16.1■□□□□ 0.17
UBA1-209ENST00000490869 TECPR2O15040 1411 aa16.1■□□□□ 0.17
UBA1-209ENST00000490869 CDC42BPGQ6DT37 1551 aa16.09■□□□□ 0.17
UBA1-209ENST00000490869 KNDC1Q76NI1 1749 aa16.09■□□□□ 0.17
UBA1-209ENST00000490869 TMEM132EQ6IEE7 984 aa16.09■□□□□ 0.17
UBA1-209ENST00000490869 MYOM2P54296 1465 aa16.09■□□□□ 0.17
UBA1-209ENST00000490869 NUTM2BA6NNL0 878 aaPredicted RBP16.08■□□□□ 0.16
UBA1-209ENST00000490869 NUTM2EB1AL46 878 aaPredicted RBP16.08■□□□□ 0.16
UBA1-209ENST00000490869 NUTM2AQ8IVF1 878 aaPredicted RBP16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms