RNA–Protein interactions for RNA: ENST00000490869.1

UBA1-209, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

TSL 2

Gene UBA1, Length 917 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-209ENST00000490869 NISCHQ9Y2I1 1504 aa27.08■■□□□ 1.93
UBA1-209ENST00000490869 CCDC180Q9P1Z9 1646 aa24.24■■□□□ 1.47
UBA1-209ENST00000490869 ABCC9O60706 1549 aa24.07■■□□□ 1.44
UBA1-209ENST00000490869 RB1CC1Q8TDY2 1594 aa22.99■■□□□ 1.27
UBA1-209ENST00000490869 NACADO15069 1562 aa22.87■■□□□ 1.25
UBA1-209ENST00000490869 DCAF8L2P0C7V8 631 aa22.79■■□□□ 1.24
UBA1-209ENST00000490869 MYO15BQ96JP2 1530 aa22.61■■□□□ 1.21
UBA1-209ENST00000490869 ZCCHC6Q5VYS8 1495 aaKnown RBP22.48■■□□□ 1.19
UBA1-209ENST00000490869 UNC13AQ9UPW8 1703 aa22.46■■□□□ 1.19
UBA1-209ENST00000490869 PABPN1Q86U42 306 aaKnown RBP eCLIP22.42■■□□□ 1.185e-9■■□□□ 12.2
UBA1-209ENST00000490869 DNAJC5BQ9UF47 199 aa22.39■■□□□ 1.17
UBA1-209ENST00000490869 DCAF1Q9Y4B6 1507 aa22.38■■□□□ 1.17
UBA1-209ENST00000490869 BICRAQ9NZM4 1560 aa22.3■■□□□ 1.16
UBA1-209ENST00000490869 SCRIBQ14160 1630 aa22.11■■□□□ 1.13
UBA1-209ENST00000490869 SHROOM4Q9ULL8 1493 aa22.03■■□□□ 1.12
UBA1-209ENST00000490869 EIF4G1Q04637 1599 aaKnown RBP21.75■■□□□ 1.07
UBA1-209ENST00000490869 CC2D2AQ9P2K1 1620 aa21.75■■□□□ 1.07
UBA1-209ENST00000490869 CECR2Q9BXF3 1484 aa21.66■■□□□ 1.06
UBA1-209ENST00000490869 NCAPD3P42695 1498 aa21.1■□□□□ 0.97
UBA1-209ENST00000490869 SMARCA4P51532 1647 aa21.1■□□□□ 0.97
UBA1-209ENST00000490869 ATAD2BQ9ULI0 1458 aa21.07■□□□□ 0.96
UBA1-209ENST00000490869 SMARCA2P51531 1590 aa21.02■□□□□ 0.96
UBA1-209ENST00000490869 BAZ1AQ9NRL2 1556 aaPredicted RBP21.02■□□□□ 0.95
UBA1-209ENST00000490869 HMGXB3Q12766 1538 aa20.97■□□□□ 0.95
UBA1-209ENST00000490869 PEG3Q9GZU2 1588 aa20.89■□□□□ 0.93
UBA1-209ENST00000490869 BAZ1BQ9UIG0 1483 aaKnown RBP20.88■□□□□ 0.93
UBA1-209ENST00000490869 MROH2BQ7Z745 1585 aa20.87■□□□□ 0.93
UBA1-209ENST00000490869 ERCC6Q03468 1493 aa20.78■□□□□ 0.92
UBA1-209ENST00000490869 NESP48681 1621 aa20.72■□□□□ 0.91
UBA1-209ENST00000490869 CUX2O14529 1486 aa20.68■□□□□ 0.9
UBA1-209ENST00000490869 WIZO95785 1651 aa20.64■□□□□ 0.89
UBA1-209ENST00000490869 LAMC3Q9Y6N6 1575 aa20.61■□□□□ 0.89
UBA1-209ENST00000490869 RSF1Q96T23 1441 aaPredicted RBP20.5■□□□□ 0.87
UBA1-209ENST00000490869 THOC2Q8NI27 1593 aaKnown RBP20.49■□□□□ 0.87
UBA1-209ENST00000490869 PDS5BQ9NTI5 1447 aa20.48■□□□□ 0.87
UBA1-209ENST00000490869 KIF21AQ7Z4S6 1674 aa20.47■□□□□ 0.87
UBA1-209ENST00000490869 CADPSQ9ULU8 1353 aa20.46■□□□□ 0.87
UBA1-209ENST00000490869 DNAJC5Q9H3Z4 198 aa20.44■□□□□ 0.86
UBA1-209ENST00000490869 TOP2AP11388 1531 aaKnown RBP20.39■□□□□ 0.85
UBA1-209ENST00000490869 MRC2Q9UBG0 1479 aa20.3■□□□□ 0.84
UBA1-209ENST00000490869 CFTRP13569 1480 aa20.27■□□□□ 0.84
UBA1-209ENST00000490869 CEP164Q9UPV0 1460 aa20.25■□□□□ 0.83
UBA1-209ENST00000490869 WDR62O43379 1518 aa20.25■□□□□ 0.83
UBA1-209ENST00000490869 FANCD2Q9BXW9 1451 aa20.24■□□□□ 0.83
UBA1-209ENST00000490869 CCDC88BA6NC98 1476 aa20.15■□□□□ 0.82
UBA1-209ENST00000490869 PRDM2Q13029 1718 aa20.1■□□□□ 0.81
UBA1-209ENST00000490869 URB2Q14146 1524 aaKnown RBP20.07■□□□□ 0.8
UBA1-209ENST00000490869 TOPBP1Q92547 1522 aa19.88■□□□□ 0.77
UBA1-209ENST00000490869 ABCC8Q09428 1581 aa19.85■□□□□ 0.77
UBA1-209ENST00000490869 IFT140Q96RY7 1462 aa19.85■□□□□ 0.77
UBA1-209ENST00000490869 DNMBPQ6XZF7 1577 aa19.83■□□□□ 0.77
UBA1-209ENST00000490869 ZNF608Q9ULD9 1512 aaPredicted RBP19.79■□□□□ 0.76
UBA1-209ENST00000490869 OSCARQ8IYS5 282 aa19.75■□□□□ 0.75
UBA1-209ENST00000490869 SUPT5HO00267 1087 aaKnown RBP19.72■□□□□ 0.75
UBA1-209ENST00000490869 EIF4G3O43432 1585 aaKnown RBP19.7■□□□□ 0.74
UBA1-209ENST00000490869 TARBP1Q13395 1621 aaKnown RBP19.69■□□□□ 0.74
UBA1-209ENST00000490869 POLA1P09884 1462 aaPredicted RBP19.68■□□□□ 0.74
UBA1-209ENST00000490869 TRIM41Q8WV44 630 aa19.64■□□□□ 0.73
UBA1-209ENST00000490869 AQRO60306 1485 aaKnown RBP eCLIP19.63■□□□□ 0.733e-9■■■■□ 26.1
UBA1-209ENST00000490869 RAD54L2Q9Y4B4 1467 aa19.61■□□□□ 0.73
UBA1-209ENST00000490869 SOGA1O94964 1423 aa19.6■□□□□ 0.73
UBA1-209ENST00000490869 CUX1P39880 1505 aa19.6■□□□□ 0.73
UBA1-209ENST00000490869 FGD5Q6ZNL6 1462 aa19.6■□□□□ 0.73
UBA1-209ENST00000490869 TDRD9Q8NDG6 1382 aaKnown RBP19.54■□□□□ 0.72
UBA1-209ENST00000490869 CHD1O14646 1710 aa19.52■□□□□ 0.72
UBA1-209ENST00000490869 WDR97A6NE52 1622 aa19.51■□□□□ 0.71
UBA1-209ENST00000490869 RIMBP3CA6NJZ7 1639 aa19.48■□□□□ 0.71
UBA1-209ENST00000490869 RIMBP3BA6NNM3 1639 aa19.48■□□□□ 0.71
UBA1-209ENST00000490869 RIMBP3Q9UFD9 1639 aa19.48■□□□□ 0.71
UBA1-209ENST00000490869 FBLN2P98095 1184 aa19.47■□□□□ 0.71
UBA1-209ENST00000490869 SNAPC4Q5SXM2 1469 aa19.45■□□□□ 0.7
UBA1-209ENST00000490869 ARHGEF11O15085 1522 aa19.44■□□□□ 0.7
UBA1-209ENST00000490869 GRIN2BQ13224 1484 aa19.41■□□□□ 0.7
UBA1-209ENST00000490869 MAGI1Q96QZ7 1491 aaPredicted RBP19.4■□□□□ 0.7
UBA1-209ENST00000490869 ABCA10Q8WWZ4 1543 aa19.38■□□□□ 0.69
UBA1-209ENST00000490869 GAPVD1Q14C86 1478 aa19.37■□□□□ 0.69
UBA1-209ENST00000490869 PBRM1Q86U86 1689 aa19.36■□□□□ 0.69
UBA1-209ENST00000490869 CHMP7Q8WUX9 453 aaPredicted RBP19.35■□□□□ 0.69
UBA1-209ENST00000490869 WRNQ14191 1432 aaPredicted RBP eCLIP19.34■□□□□ 0.69
UBA1-209ENST00000490869 ABCA5Q8WWZ7 1642 aa19.34■□□□□ 0.69
UBA1-209ENST00000490869 BIVM-ERCC5R4GMW8 1640 aa19.34■□□□□ 0.69
UBA1-209ENST00000490869 SYNJ2O15056 1496 aa19.34■□□□□ 0.69
UBA1-209ENST00000490869 TOP2BQ02880 1626 aa19.33■□□□□ 0.69
UBA1-209ENST00000490869 SYNJ1O43426 1573 aa19.32■□□□□ 0.68
UBA1-209ENST00000490869 CLASP1Q7Z460 1538 aa19.3■□□□□ 0.68
UBA1-209ENST00000490869 CYB5RLQ6IPT4 315 aa19.27■□□□□ 0.68
UBA1-209ENST00000490869 ARAP1Q96P48 1450 aa19.26■□□□□ 0.67
UBA1-209ENST00000490869 ADAMTS12P58397 1594 aa19.19■□□□□ 0.66
UBA1-209ENST00000490869 GRIN2AQ12879 1464 aa19.16■□□□□ 0.66
UBA1-209ENST00000490869 ERICH3Q5RHP9 1530 aa19.14■□□□□ 0.65
UBA1-209ENST00000490869 FHAD1B1AJZ9 1412 aa19.13■□□□□ 0.65
UBA1-209ENST00000490869 CEP170Q5SW79 1584 aa19.1■□□□□ 0.65
UBA1-209ENST00000490869 NUP160Q12769 1436 aa19.09■□□□□ 0.65
UBA1-209ENST00000490869 TRHP20396 242 aaPredicted RBP19.02■□□□□ 0.64
UBA1-209ENST00000490869 ERCC6L2Q5T890 1561 aa19.01■□□□□ 0.63
UBA1-209ENST00000490869 SHROOM2Q13796 1616 aa18.99■□□□□ 0.63
UBA1-209ENST00000490869 KIF27Q86VH2 1401 aa18.96■□□□□ 0.63
UBA1-209ENST00000490869 IGF1RP08069 1367 aa18.92■□□□□ 0.62
UBA1-209ENST00000490869 RUSC2Q8N2Y8 1516 aa18.91■□□□□ 0.62
UBA1-209ENST00000490869 CUL7Q14999 1698 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms