RNA–Protein interactions for RNA: ENST00000490484.7

RBM39-236, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 871 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-236ENST00000490484 CHGAP10645 457 aaKnown RBP15.7■□□□□ 0.1
RBM39-236ENST00000490484 SENP3Q9H4L4 574 aaPredicted RBP15.7■□□□□ 0.1
RBM39-236ENST00000490484 HFM1A2PYH4 1435 aa15.68■□□□□ 0.1
RBM39-236ENST00000490484 PPP1R15AO75807 674 aaPredicted RBP15.68■□□□□ 0.1
RBM39-236ENST00000490484 BCANQ96GW7 911 aa15.68■□□□□ 0.1
RBM39-236ENST00000490484 SLC26A8Q96RN1 970 aa15.68■□□□□ 0.1
RBM39-236ENST00000490484 XIRP1Q702N8 1843 aaKnown RBP15.68■□□□□ 0.1
RBM39-236ENST00000490484 NWD1Q149M9 1564 aa15.67■□□□□ 0.1
RBM39-236ENST00000490484 PLEKHG1Q9ULL1 1385 aa15.67■□□□□ 0.1
RBM39-236ENST00000490484 DISP3Q9P2K9 1392 aa15.65■□□□□ 0.1
RBM39-236ENST00000490484 NKTRP30414 1462 aaKnown RBP15.65■□□□□ 0.1
RBM39-236ENST00000490484 TRPM2O94759 1503 aa15.64■□□□□ 0.09
RBM39-236ENST00000490484 NUTM2DQ5VT03 806 aaPredicted RBP15.64■□□□□ 0.09
RBM39-236ENST00000490484 CLTCL1P53675 1640 aa15.64■□□□□ 0.09
RBM39-236ENST00000490484 HSPA1LP34931 641 aa15.63■□□□□ 0.09
RBM39-236ENST00000490484 TMEM94Q12767 1356 aa15.62■□□□□ 0.09
RBM39-236ENST00000490484 KCNA6P17658 529 aa15.62■□□□□ 0.09
RBM39-236ENST00000490484 HDGFP51858 240 aaKnown RBP15.62■□□□□ 0.09
RBM39-236ENST00000490484 DIP2AQ14689 1571 aa15.62■□□□□ 0.09
RBM39-236ENST00000490484 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.61■□□□□ 0.09
RBM39-236ENST00000490484 ADAMTS13Q76LX8 1427 aa15.6■□□□□ 0.09
RBM39-236ENST00000490484 TRIM52Q96A61 297 aa15.6■□□□□ 0.09
RBM39-236ENST00000490484 RBM33Q96EV2 1170 aaKnown RBP15.6■□□□□ 0.09
RBM39-236ENST00000490484 CHD2O14647 1828 aaKnown RBP15.59■□□□□ 0.09
RBM39-236ENST00000490484 PROSER2Q86WR7 435 aaPredicted RBP15.58■□□□□ 0.08
RBM39-236ENST00000490484 ZNF326Q5BKZ1 582 aaKnown RBP15.57■□□□□ 0.08
RBM39-236ENST00000490484 NRXN3Q9Y4C0 1643 aa15.57■□□□□ 0.08
RBM39-236ENST00000490484 KIF1BO60333 1816 aa15.57■□□□□ 0.08
RBM39-236ENST00000490484 NEXMIFQ5QGS0 1516 aa15.56■□□□□ 0.08
RBM39-236ENST00000490484 SETBP1Q9Y6X0 1596 aa15.56■□□□□ 0.08
RBM39-236ENST00000490484 MED1Q15648 1581 aaPredicted RBP15.55■□□□□ 0.08
RBM39-236ENST00000490484 SLC4A1APQ9BWU0 796 aaKnown RBP15.55■□□□□ 0.08
RBM39-236ENST00000490484 TBX22Q9Y458 520 aa15.55■□□□□ 0.08
RBM39-236ENST00000490484 MSH6P52701 1360 aa15.54■□□□□ 0.08
RBM39-236ENST00000490484 ROBO1Q9Y6N7 1651 aa15.53■□□□□ 0.08
RBM39-236ENST00000490484 PIK3R4Q99570 1358 aa15.52■□□□□ 0.08
RBM39-236ENST00000490484 XRN1Q8IZH2 1706 aaKnown RBP15.51■□□□□ 0.07
RBM39-236ENST00000490484 PTPRUQ92729 1446 aa15.51■□□□□ 0.07
RBM39-236ENST00000490484 FOXD1Q16676 465 aa15.5■□□□□ 0.07
RBM39-236ENST00000490484 ILDR2Q71H61 639 aa15.5■□□□□ 0.07
RBM39-236ENST00000490484 C14orf37Q86TY3 774 aa15.49■□□□□ 0.07
RBM39-236ENST00000490484 FAM135BQ49AJ0 1406 aa15.49■□□□□ 0.07
RBM39-236ENST00000490484 METP08581 1390 aa15.48■□□□□ 0.07
RBM39-236ENST00000490484 AMOTL2Q9Y2J4 779 aa15.47■□□□□ 0.07
RBM39-236ENST00000490484 PPLO60437 1756 aa15.47■□□□□ 0.07
RBM39-236ENST00000490484 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.46■□□□□ 0.07
RBM39-236ENST00000490484 CCDC144AA2RUR9 1427 aa15.46■□□□□ 0.07
RBM39-236ENST00000490484 NCOA3Q9Y6Q9 1424 aa15.46■□□□□ 0.07
RBM39-236ENST00000490484 SETD5Q9C0A6 1442 aa15.45■□□□□ 0.06
RBM39-236ENST00000490484 SETD1AO15047 1707 aaKnown RBP15.45■□□□□ 0.06
RBM39-236ENST00000490484 MPHOSPH9Q99550 1183 aa15.44■□□□□ 0.06
RBM39-236ENST00000490484 SLAIN2Q9P270 581 aa15.43■□□□□ 0.06
RBM39-236ENST00000490484 PHLPP1O60346 1717 aa15.43■□□□□ 0.06
RBM39-236ENST00000490484 RAB3GAP2Q9H2M9 1393 aa15.42■□□□□ 0.06
RBM39-236ENST00000490484 NALCNQ8IZF0 1738 aa15.41■□□□□ 0.06
RBM39-236ENST00000490484 VGFO15240 615 aaPredicted RBP15.41■□□□□ 0.06
RBM39-236ENST00000490484 ATF3P18847 181 aa15.41■□□□□ 0.06
RBM39-236ENST00000490484 PHF23Q9BUL5 403 aaPredicted RBP15.41■□□□□ 0.06
RBM39-236ENST00000490484 SPATA31E1Q6ZUB1 1445 aa15.41■□□□□ 0.06
RBM39-236ENST00000490484 RPGRIP1LQ68CZ1 1315 aa15.41■□□□□ 0.06
RBM39-236ENST00000490484 IFT172Q9UG01 1749 aa15.4■□□□□ 0.06
RBM39-236ENST00000490484 CADPS2Q86UW7 1296 aa15.4■□□□□ 0.06
RBM39-236ENST00000490484 C19orf44Q9H6X5 657 aa15.4■□□□□ 0.06
RBM39-236ENST00000490484 DCCP43146 1447 aa15.4■□□□□ 0.06
RBM39-236ENST00000490484 COL16A1Q07092 1604 aaPredicted RBP15.39■□□□□ 0.05
RBM39-236ENST00000490484 PTCH1Q13635 1447 aa15.38■□□□□ 0.05
RBM39-236ENST00000490484 ADGRL3Q9HAR2 1447 aa15.38■□□□□ 0.05
RBM39-236ENST00000490484 AHDC1Q5TGY3 1603 aaPredicted RBP15.37■□□□□ 0.05
RBM39-236ENST00000490484 RGL3Q3MIN7 710 aa15.37■□□□□ 0.05
RBM39-236ENST00000490484 ACIN1Q9UKV3 1341 aaKnown RBP15.37■□□□□ 0.05
RBM39-236ENST00000490484 ASXL1Q8IXJ9 1541 aa15.36■□□□□ 0.05
RBM39-236ENST00000490484 ROBO2Q9HCK4 1378 aa15.36■□□□□ 0.05
RBM39-236ENST00000490484 MST1RQ04912 1400 aa15.35■□□□□ 0.05
RBM39-236ENST00000490484 SOCS7O14512 581 aa15.35■□□□□ 0.05
RBM39-236ENST00000490484 ADGRF5Q8IZF2 1346 aa15.35■□□□□ 0.05
RBM39-236ENST00000490484 PRAG1Q86YV5 1406 aa15.34■□□□□ 0.05
RBM39-236ENST00000490484 ANKRD30BQ9BXX2 1392 aa15.34■□□□□ 0.05
RBM39-236ENST00000490484 JCADQ9P266 1359 aa15.33■□□□□ 0.04
RBM39-236ENST00000490484 PIK3C2GO75747 1445 aa15.33■□□□□ 0.04
RBM39-236ENST00000490484 BRINP3Q76B58 766 aa15.32■□□□□ 0.04
RBM39-236ENST00000490484 NHSL1Q5SYE7 1610 aa15.32■□□□□ 0.04
RBM39-236ENST00000490484 SHPRHQ149N8 1683 aa15.3■□□□□ 0.04
RBM39-236ENST00000490484 KNDC1Q76NI1 1749 aa15.29■□□□□ 0.04
RBM39-236ENST00000490484 MYOM2P54296 1465 aa15.29■□□□□ 0.04
RBM39-236ENST00000490484 LRP6O75581 1613 aa15.28■□□□□ 0.04
RBM39-236ENST00000490484 LAMC1P11047 1609 aa15.28■□□□□ 0.04
RBM39-236ENST00000490484 CDC42BPGQ6DT37 1551 aa15.28■□□□□ 0.04
RBM39-236ENST00000490484 C1orf167Q5SNV9 1468 aa15.27■□□□□ 0.04
RBM39-236ENST00000490484 TECPR2O15040 1411 aa15.27■□□□□ 0.04
RBM39-236ENST00000490484 RGS17Q9UGC6 210 aaPredicted RBP15.27■□□□□ 0.04
RBM39-236ENST00000490484 NRXN1Q9ULB1 1477 aa15.27■□□□□ 0.03
RBM39-236ENST00000490484 LRPPRCP42704 1394 aaKnown RBP15.26■□□□□ 0.03
RBM39-236ENST00000490484 STK26Q9P289 416 aa15.26■□□□□ 0.03
RBM39-236ENST00000490484 SPATA31A6Q5VVP1 1343 aa15.25■□□□□ 0.03
RBM39-236ENST00000490484 TMEM132EQ6IEE7 984 aa15.25■□□□□ 0.03
RBM39-236ENST00000490484 DDX17Q92841 729 aaKnown RBP15.24■□□□□ 0.03
RBM39-236ENST00000490484 YTHDC2Q9H6S0 1430 aaKnown RBP15.24■□□□□ 0.03
RBM39-236ENST00000490484 PLEKHH1Q9ULM0 1364 aa15.23■□□□□ 0.03
RBM39-236ENST00000490484 ABCC11Q96J66 1382 aa15.22■□□□□ 0.03
RBM39-236ENST00000490484 HRCP23327 699 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms