RNA–Protein interactions for RNA: ENST00000490101.1

SRM-206, Transcript of spermidine synthase, humanhuman

TSL 2

Gene SRM, Length 461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-206ENST00000490101 SLC52A1Q9NWF4 448 aa26.85■■□□□ 1.89
SRM-206ENST00000490101 TET3O43151 1660 aa26.85■■□□□ 1.89
SRM-206ENST00000490101 RPRD2Q5VT52 1461 aaKnown RBP26.84■■□□□ 1.89
SRM-206ENST00000490101 SLC26A8Q96RN1 970 aa26.83■■□□□ 1.89
SRM-206ENST00000490101 UNC13BO14795 1591 aa26.83■■□□□ 1.89
SRM-206ENST00000490101 MED1Q15648 1581 aaPredicted RBP26.83■■□□□ 1.89
SRM-206ENST00000490101 XIRP1Q702N8 1843 aaKnown RBP26.81■■□□□ 1.88
SRM-206ENST00000490101 BCANQ96GW7 911 aa26.81■■□□□ 1.88
SRM-206ENST00000490101 MYO5BQ9ULV0 1848 aa26.77■■□□□ 1.88
SRM-206ENST00000490101 TMEM94Q12767 1356 aa26.75■■□□□ 1.87
SRM-206ENST00000490101 KCNA6P17658 529 aa26.75■■□□□ 1.87
SRM-206ENST00000490101 DHX57Q6P158 1386 aaKnown RBP26.74■■□□□ 1.87
SRM-206ENST00000490101 E9PCH4 1651 aa26.74■■□□□ 1.87
SRM-206ENST00000490101 CHGAP10645 457 aaKnown RBP26.74■■□□□ 1.87
SRM-206ENST00000490101 CCER1Q8TC90 406 aaPredicted RBP26.74■■□□□ 1.87
SRM-206ENST00000490101 PPP1R15AO75807 674 aaPredicted RBP26.73■■□□□ 1.87
SRM-206ENST00000490101 RBM33Q96EV2 1170 aaKnown RBP26.73■■□□□ 1.87
SRM-206ENST00000490101 RIMS2Q9UQ26 1411 aa26.73■■□□□ 1.87
SRM-206ENST00000490101 TMEM131LA2VDJ0 1609 aa26.72■■□□□ 1.87
SRM-206ENST00000490101 PROSER2Q86WR7 435 aaPredicted RBP26.72■■□□□ 1.87
SRM-206ENST00000490101 ZFYVE9O95405 1425 aa26.72■■□□□ 1.87
SRM-206ENST00000490101 IQGAP3Q86VI3 1631 aa26.72■■□□□ 1.87
SRM-206ENST00000490101 NUP155O75694 1391 aa26.7■■□□□ 1.86
SRM-206ENST00000490101 TRIM52Q96A61 297 aa26.68■■□□□ 1.86
SRM-206ENST00000490101 PHF23Q9BUL5 403 aaPredicted RBP26.68■■□□□ 1.86
SRM-206ENST00000490101 PLEKHG1Q9ULL1 1385 aa26.68■■□□□ 1.86
SRM-206ENST00000490101 NWD1Q149M9 1564 aa26.67■■□□□ 1.86
SRM-206ENST00000490101 NKTRP30414 1462 aaKnown RBP26.67■■□□□ 1.86
SRM-206ENST00000490101 HDGFP51858 240 aaKnown RBP26.66■■□□□ 1.86
SRM-206ENST00000490101 NUTM2DQ5VT03 806 aaPredicted RBP26.65■■□□□ 1.86
SRM-206ENST00000490101 CLSPNQ9HAW4 1339 aa26.64■■□□□ 1.85
SRM-206ENST00000490101 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.61■■□□□ 1.85
SRM-206ENST00000490101 FAM135BQ49AJ0 1406 aa26.61■■□□□ 1.85
SRM-206ENST00000490101 MSH6P52701 1360 aa26.59■■□□□ 1.85
SRM-206ENST00000490101 MPHOSPH9Q99550 1183 aa26.59■■□□□ 1.85
SRM-206ENST00000490101 CHD2O14647 1828 aaKnown RBP26.59■■□□□ 1.85
SRM-206ENST00000490101 ROBO1Q9Y6N7 1651 aa26.58■■□□□ 1.85
SRM-206ENST00000490101 TBX22Q9Y458 520 aa26.56■■□□□ 1.84
SRM-206ENST00000490101 ADAMTS13Q76LX8 1427 aa26.54■■□□□ 1.84
SRM-206ENST00000490101 SLC4A1APQ9BWU0 796 aaKnown RBP26.53■■□□□ 1.84
SRM-206ENST00000490101 SPHKAPQ2M3C7 1700 aa26.53■■□□□ 1.84
SRM-206ENST00000490101 DIP2AQ14689 1571 aa26.51■■□□□ 1.83
SRM-206ENST00000490101 C14orf37Q86TY3 774 aa26.51■■□□□ 1.83
SRM-206ENST00000490101 ZEB1P37275 1124 aaPredicted RBP26.49■■□□□ 1.83
SRM-206ENST00000490101 SLAIN2Q9P270 581 aa26.49■■□□□ 1.83
SRM-206ENST00000490101 ZNF326Q5BKZ1 582 aaKnown RBP26.48■■□□□ 1.83
SRM-206ENST00000490101 TRPM2O94759 1503 aa26.46■■□□□ 1.83
SRM-206ENST00000490101 PIK3R4Q99570 1358 aa26.45■■□□□ 1.82
SRM-206ENST00000490101 PHLPP1O60346 1717 aa26.43■■□□□ 1.82
SRM-206ENST00000490101 NCOA3Q9Y6Q9 1424 aa26.42■■□□□ 1.82
SRM-206ENST00000490101 AMOTL2Q9Y2J4 779 aa26.42■■□□□ 1.82
SRM-206ENST00000490101 PTPRUQ92729 1446 aa26.41■■□□□ 1.82
SRM-206ENST00000490101 CLTCL1P53675 1640 aa26.41■■□□□ 1.82
SRM-206ENST00000490101 RGS17Q9UGC6 210 aaPredicted RBP26.41■■□□□ 1.82
SRM-206ENST00000490101 NRXN3Q9Y4C0 1643 aa26.39■■□□□ 1.82
SRM-206ENST00000490101 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.39■■□□□ 1.82
SRM-206ENST00000490101 ANKRD30BQ9BXX2 1392 aa26.39■■□□□ 1.82
SRM-206ENST00000490101 ATF3P18847 181 aa26.38■■□□□ 1.81
SRM-206ENST00000490101 SETBP1Q9Y6X0 1596 aa26.37■■□□□ 1.81
SRM-206ENST00000490101 FOXD1Q16676 465 aa26.37■■□□□ 1.81
SRM-206ENST00000490101 C19orf44Q9H6X5 657 aa26.37■■□□□ 1.81
SRM-206ENST00000490101 CADPS2Q86UW7 1296 aa26.36■■□□□ 1.81
SRM-206ENST00000490101 NEXMIFQ5QGS0 1516 aa26.34■■□□□ 1.81
SRM-206ENST00000490101 XRN1Q8IZH2 1706 aaKnown RBP26.33■■□□□ 1.81
SRM-206ENST00000490101 JCADQ9P266 1359 aa26.33■■□□□ 1.8
SRM-206ENST00000490101 KIF1BO60333 1816 aa26.32■■□□□ 1.8
SRM-206ENST00000490101 COL16A1Q07092 1604 aaPredicted RBP26.32■■□□□ 1.8
SRM-206ENST00000490101 METP08581 1390 aa26.32■■□□□ 1.8
SRM-206ENST00000490101 SIN3AQ96ST3 1273 aa26.31■■□□□ 1.8
SRM-206ENST00000490101 POTEAQ6S8J7 498 aa26.28■■□□□ 1.8
SRM-206ENST00000490101 AHDC1Q5TGY3 1603 aaPredicted RBP26.26■■□□□ 1.79
SRM-206ENST00000490101 TIMELESSQ9UNS1 1208 aa26.26■■□□□ 1.79
SRM-206ENST00000490101 NEUROD1Q13562 356 aa26.25■■□□□ 1.79
SRM-206ENST00000490101 DCCP43146 1447 aa26.24■■□□□ 1.79
SRM-206ENST00000490101 BRINP3Q76B58 766 aa26.24■■□□□ 1.79
SRM-206ENST00000490101 LRP6O75581 1613 aa26.2■■□□□ 1.78
SRM-206ENST00000490101 ASXL1Q8IXJ9 1541 aa26.19■■□□□ 1.78
SRM-206ENST00000490101 VGFO15240 615 aaPredicted RBP26.19■■□□□ 1.78
SRM-206ENST00000490101 MEX3CQ5U5Q3 659 aaKnown RBP26.19■■□□□ 1.78
SRM-206ENST00000490101 MST1RQ04912 1400 aa26.19■■□□□ 1.78
SRM-206ENST00000490101 ADGRL3Q9HAR2 1447 aa26.19■■□□□ 1.78
SRM-206ENST00000490101 SPATA31A6Q5VVP1 1343 aa26.18■■□□□ 1.78
SRM-206ENST00000490101 NALCNQ8IZF0 1738 aa26.18■■□□□ 1.78
SRM-206ENST00000490101 SHPRHQ149N8 1683 aa26.18■■□□□ 1.78
SRM-206ENST00000490101 CCDC144AA2RUR9 1427 aa26.14■■□□□ 1.78
SRM-206ENST00000490101 SETD1AO15047 1707 aaKnown RBP26.14■■□□□ 1.78
SRM-206ENST00000490101 RPGRIP1LQ68CZ1 1315 aa26.14■■□□□ 1.77
SRM-206ENST00000490101 PPLO60437 1756 aa26.13■■□□□ 1.77
SRM-206ENST00000490101 TONSLQ96HA7 1378 aa26.13■■□□□ 1.77
SRM-206ENST00000490101 NUTM2BA6NNL0 878 aaPredicted RBP26.12■■□□□ 1.77
SRM-206ENST00000490101 NUTM2EB1AL46 878 aaPredicted RBP26.12■■□□□ 1.77
SRM-206ENST00000490101 NUTM2AQ8IVF1 878 aaPredicted RBP26.12■■□□□ 1.77
SRM-206ENST00000490101 NHSL1Q5SYE7 1610 aa26.11■■□□□ 1.77
SRM-206ENST00000490101 PTCH1Q13635 1447 aa26.11■■□□□ 1.77
SRM-206ENST00000490101 ROBO2Q9HCK4 1378 aa26.1■■□□□ 1.77
SRM-206ENST00000490101 DDX17Q92841 729 aaKnown RBP26.1■■□□□ 1.77
SRM-206ENST00000490101 RGL3Q3MIN7 710 aa26.06■■□□□ 1.76
SRM-206ENST00000490101 C1orf167Q5SNV9 1468 aa26.05■■□□□ 1.76
SRM-206ENST00000490101 ZNF772Q68DY9 489 aaPredicted RBP26.05■■□□□ 1.76
SRM-206ENST00000490101 L3MBTL2Q969R5 705 aa26.04■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms