RNA–Protein interactions for RNA: ENST00000489921.1

TNFRSF1B-202, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 3

Gene TNFRSF1B, Length 409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-202ENST00000489921 NUP155O75694 1391 aa29.72■■■□□ 2.35
TNFRSF1B-202ENST00000489921 RRBP1Q9P2E9 1410 aaKnown RBP29.71■■■□□ 2.35
TNFRSF1B-202ENST00000489921 KCNA6P17658 529 aa29.7■■■□□ 2.35
TNFRSF1B-202ENST00000489921 RIMS2Q9UQ26 1411 aa29.69■■■□□ 2.34
TNFRSF1B-202ENST00000489921 NWD1Q149M9 1564 aa29.66■■■□□ 2.34
TNFRSF1B-202ENST00000489921 PLEKHG1Q9ULL1 1385 aa29.65■■■□□ 2.34
TNFRSF1B-202ENST00000489921 TMEM94Q12767 1356 aa29.64■■■□□ 2.33
TNFRSF1B-202ENST00000489921 CHD2O14647 1828 aaKnown RBP29.63■■■□□ 2.33
TNFRSF1B-202ENST00000489921 SENP3Q9H4L4 574 aaPredicted RBP29.62■■■□□ 2.33
TNFRSF1B-202ENST00000489921 MED1Q15648 1581 aaPredicted RBP29.61■■■□□ 2.33
TNFRSF1B-202ENST00000489921 RBM33Q96EV2 1170 aaKnown RBP29.6■■■□□ 2.33
TNFRSF1B-202ENST00000489921 CHGAP10645 457 aaKnown RBP29.59■■■□□ 2.33
TNFRSF1B-202ENST00000489921 NKTRP30414 1462 aaKnown RBP29.59■■■□□ 2.33
TNFRSF1B-202ENST00000489921 HDGFP51858 240 aaKnown RBP29.58■■■□□ 2.33
TNFRSF1B-202ENST00000489921 PROSER2Q86WR7 435 aaPredicted RBP29.58■■■□□ 2.33
TNFRSF1B-202ENST00000489921 BCANQ96GW7 911 aa29.58■■■□□ 2.33
TNFRSF1B-202ENST00000489921 SPHKAPQ2M3C7 1700 aa29.57■■■□□ 2.32
TNFRSF1B-202ENST00000489921 NAIPQ13075 1403 aa29.57■■■□□ 2.32
TNFRSF1B-202ENST00000489921 SOCS7O14512 581 aa29.56■■■□□ 2.32
TNFRSF1B-202ENST00000489921 ADAMTS13Q76LX8 1427 aa29.55■■■□□ 2.32
TNFRSF1B-202ENST00000489921 PPP1R15AO75807 674 aaPredicted RBP29.55■■■□□ 2.32
TNFRSF1B-202ENST00000489921 NUTM2DQ5VT03 806 aaPredicted RBP29.55■■■□□ 2.32
TNFRSF1B-202ENST00000489921 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.55■■■□□ 2.32
TNFRSF1B-202ENST00000489921 TBX22Q9Y458 520 aa29.55■■■□□ 2.32
TNFRSF1B-202ENST00000489921 FAM135BQ49AJ0 1406 aa29.53■■■□□ 2.32
TNFRSF1B-202ENST00000489921 DIP2AQ14689 1571 aa29.47■■■□□ 2.31
TNFRSF1B-202ENST00000489921 ROBO1Q9Y6N7 1651 aa29.47■■■□□ 2.31
TNFRSF1B-202ENST00000489921 CLTCL1P53675 1640 aa29.45■■■□□ 2.3
TNFRSF1B-202ENST00000489921 NRXN3Q9Y4C0 1643 aa29.45■■■□□ 2.3
TNFRSF1B-202ENST00000489921 HFM1A2PYH4 1435 aa29.44■■■□□ 2.3
TNFRSF1B-202ENST00000489921 PIK3R4Q99570 1358 aa29.42■■■□□ 2.3
TNFRSF1B-202ENST00000489921 MSH6P52701 1360 aa29.41■■■□□ 2.3
TNFRSF1B-202ENST00000489921 TRPM2O94759 1503 aa29.41■■■□□ 2.3
TNFRSF1B-202ENST00000489921 PTPRUQ92729 1446 aa29.41■■■□□ 2.3
TNFRSF1B-202ENST00000489921 NCOA3Q9Y6Q9 1424 aa29.39■■■□□ 2.3
TNFRSF1B-202ENST00000489921 SETBP1Q9Y6X0 1596 aa29.39■■■□□ 2.29
TNFRSF1B-202ENST00000489921 SLAIN2Q9P270 581 aa29.38■■■□□ 2.29
TNFRSF1B-202ENST00000489921 NEXMIFQ5QGS0 1516 aa29.35■■■□□ 2.29
TNFRSF1B-202ENST00000489921 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.34■■■□□ 2.29
TNFRSF1B-202ENST00000489921 KIF1BO60333 1816 aa29.34■■■□□ 2.29
TNFRSF1B-202ENST00000489921 AMOTL2Q9Y2J4 779 aa29.34■■■□□ 2.29
TNFRSF1B-202ENST00000489921 ZNF326Q5BKZ1 582 aaKnown RBP29.33■■■□□ 2.29
TNFRSF1B-202ENST00000489921 XRN1Q8IZH2 1706 aaKnown RBP29.32■■■□□ 2.28
TNFRSF1B-202ENST00000489921 TRIM52Q96A61 297 aa29.31■■■□□ 2.28
TNFRSF1B-202ENST00000489921 METP08581 1390 aa29.29■■■□□ 2.28
TNFRSF1B-202ENST00000489921 PHF23Q9BUL5 403 aaPredicted RBP29.28■■■□□ 2.28
TNFRSF1B-202ENST00000489921 RGS17Q9UGC6 210 aaPredicted RBP29.28■■■□□ 2.28
TNFRSF1B-202ENST00000489921 C19orf44Q9H6X5 657 aa29.27■■■□□ 2.28
TNFRSF1B-202ENST00000489921 PHLPP1O60346 1717 aa29.27■■■□□ 2.28
TNFRSF1B-202ENST00000489921 SLC4A1APQ9BWU0 796 aaKnown RBP29.25■■■□□ 2.27
TNFRSF1B-202ENST00000489921 C14orf37Q86TY3 774 aa29.23■■■□□ 2.27
TNFRSF1B-202ENST00000489921 CADPS2Q86UW7 1296 aa29.22■■■□□ 2.27
TNFRSF1B-202ENST00000489921 COL16A1Q07092 1604 aaPredicted RBP29.22■■■□□ 2.27
TNFRSF1B-202ENST00000489921 SETD1AO15047 1707 aaKnown RBP29.21■■■□□ 2.27
TNFRSF1B-202ENST00000489921 ATF3P18847 181 aa29.18■■■□□ 2.26
TNFRSF1B-202ENST00000489921 FOXD1Q16676 465 aa29.18■■■□□ 2.26
TNFRSF1B-202ENST00000489921 PPLO60437 1756 aa29.17■■■□□ 2.26
TNFRSF1B-202ENST00000489921 DCCP43146 1447 aa29.15■■■□□ 2.26
TNFRSF1B-202ENST00000489921 AHDC1Q5TGY3 1603 aaPredicted RBP29.15■■■□□ 2.26
TNFRSF1B-202ENST00000489921 VGFO15240 615 aaPredicted RBP29.13■■■□□ 2.25
TNFRSF1B-202ENST00000489921 RPGRIP1LQ68CZ1 1315 aa29.13■■■□□ 2.25
TNFRSF1B-202ENST00000489921 JCADQ9P266 1359 aa29.13■■■□□ 2.25
TNFRSF1B-202ENST00000489921 BRINP3Q76B58 766 aa29.11■■■□□ 2.25
TNFRSF1B-202ENST00000489921 NALCNQ8IZF0 1738 aa29.11■■■□□ 2.25
TNFRSF1B-202ENST00000489921 MST1RQ04912 1400 aa29.1■■■□□ 2.25
TNFRSF1B-202ENST00000489921 MPHOSPH9Q99550 1183 aa29.09■■■□□ 2.25
TNFRSF1B-202ENST00000489921 ADGRL3Q9HAR2 1447 aa29.08■■■□□ 2.25
TNFRSF1B-202ENST00000489921 POTEAQ6S8J7 498 aa29.06■■■□□ 2.24
TNFRSF1B-202ENST00000489921 SPATA31E1Q6ZUB1 1445 aa29.05■■■□□ 2.24
TNFRSF1B-202ENST00000489921 SHPRHQ149N8 1683 aa29.05■■■□□ 2.24
TNFRSF1B-202ENST00000489921 ASXL1Q8IXJ9 1541 aa29.04■■■□□ 2.24
TNFRSF1B-202ENST00000489921 PTCH1Q13635 1447 aa29.04■■■□□ 2.24
TNFRSF1B-202ENST00000489921 PRAG1Q86YV5 1406 aa29.04■■■□□ 2.24
TNFRSF1B-202ENST00000489921 ROBO2Q9HCK4 1378 aa29.04■■■□□ 2.24
TNFRSF1B-202ENST00000489921 IFT172Q9UG01 1749 aa29.03■■■□□ 2.24
TNFRSF1B-202ENST00000489921 LRP6O75581 1613 aa29.03■■■□□ 2.24
TNFRSF1B-202ENST00000489921 CCDC144AA2RUR9 1427 aa29.03■■■□□ 2.24
TNFRSF1B-202ENST00000489921 NHSL1Q5SYE7 1610 aa29.02■■■□□ 2.24
TNFRSF1B-202ENST00000489921 ADGRF5Q8IZF2 1346 aa29■■■□□ 2.23
TNFRSF1B-202ENST00000489921 SPATA31A6Q5VVP1 1343 aa28.98■■■□□ 2.23
TNFRSF1B-202ENST00000489921 SETD5Q9C0A6 1442 aa28.98■■■□□ 2.23
TNFRSF1B-202ENST00000489921 RGL3Q3MIN7 710 aa28.97■■■□□ 2.23
TNFRSF1B-202ENST00000489921 C1orf167Q5SNV9 1468 aa28.94■■■□□ 2.22
TNFRSF1B-202ENST00000489921 DDX17Q92841 729 aaKnown RBP28.94■■■□□ 2.22
TNFRSF1B-202ENST00000489921 ANKRD30BQ9BXX2 1392 aa28.91■■■□□ 2.22
TNFRSF1B-202ENST00000489921 LAMC1P11047 1609 aa28.91■■■□□ 2.22
TNFRSF1B-202ENST00000489921 ACIN1Q9UKV3 1341 aaKnown RBP28.89■■■□□ 2.21
TNFRSF1B-202ENST00000489921 RAB3GAP2Q9H2M9 1393 aa28.88■■■□□ 2.21
TNFRSF1B-202ENST00000489921 PIK3C2GO75747 1445 aa28.87■■■□□ 2.21
TNFRSF1B-202ENST00000489921 ORAI2Q96SN7 254 aa28.86■■■□□ 2.21
TNFRSF1B-202ENST00000489921 TECPR2O15040 1411 aa28.86■■■□□ 2.21
TNFRSF1B-202ENST00000489921 LRRC59Q96AG4 307 aaKnown RBP28.85■■■□□ 2.21
TNFRSF1B-202ENST00000489921 TMEM132EQ6IEE7 984 aa28.83■■■□□ 2.21
TNFRSF1B-202ENST00000489921 MEX3CQ5U5Q3 659 aaKnown RBP28.82■■■□□ 2.2
TNFRSF1B-202ENST00000489921 LRPPRCP42704 1394 aaKnown RBP28.82■■■□□ 2.2
TNFRSF1B-202ENST00000489921 KNDC1Q76NI1 1749 aa28.82■■■□□ 2.2
TNFRSF1B-202ENST00000489921 CDC42BPGQ6DT37 1551 aa28.81■■■□□ 2.2
TNFRSF1B-202ENST00000489921 PNPLA6Q8IY17 1366 aa28.81■■■□□ 2.2
TNFRSF1B-202ENST00000489921 ABCC11Q96J66 1382 aa28.81■■■□□ 2.2
TNFRSF1B-202ENST00000489921 NUTM2BA6NNL0 878 aaPredicted RBP28.81■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 104.2 ms