RNA–Protein interactions for RNA: ENST00000489712.6

NF1-213, Transcript of neurofibromin 1, humanhuman

TSL 4

Gene NF1, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-213ENST00000489712 MAP2K5Q13163 448 aa8.57□□□□□ -1.04
NF1-213ENST00000489712 LMOD2Q6P5Q4 547 aa8.57□□□□□ -1.04
NF1-213ENST00000489712 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.57□□□□□ -1.04
NF1-213ENST00000489712 PRR14Q9BWN1 585 aa8.57□□□□□ -1.04
NF1-213ENST00000489712 APLP1P51693 650 aa8.56□□□□□ -1.04
NF1-213ENST00000489712 KCNC4Q03721 635 aa8.56□□□□□ -1.04
NF1-213ENST00000489712 A0A0G2JS52 829 aa8.54□□□□□ -1.04
NF1-213ENST00000489712 SLC24A1O60721 1099 aa8.54□□□□□ -1.04
NF1-213ENST00000489712 KMT5BQ4FZB7 885 aa8.53□□□□□ -1.04
NF1-213ENST00000489712 MTRQ99707 1265 aa8.53□□□□□ -1.04
NF1-213ENST00000489712 CFHP08603 1231 aa8.52□□□□□ -1.05
NF1-213ENST00000489712 IL21Q9HBE4 155 aa8.52□□□□□ -1.05
NF1-213ENST00000489712 TJAP1Q5JTD0 557 aa8.51□□□□□ -1.05
NF1-213ENST00000489712 RSPH4AQ5TD94 716 aa8.51□□□□□ -1.05
NF1-213ENST00000489712 DAXXQ9UER7 740 aaPredicted RBP8.51□□□□□ -1.05
NF1-213ENST00000489712 NLRP7Q8WX94 980 aa8.5□□□□□ -1.05
NF1-213ENST00000489712 PCDHB3Q9Y5E6 796 aa8.5□□□□□ -1.05
NF1-213ENST00000489712 MINK1Q8N4C8 1332 aaPredicted RBP8.5□□□□□ -1.05
NF1-213ENST00000489712 IRF6O14896 467 aa8.49□□□□□ -1.05
NF1-213ENST00000489712 SLC10A3P09131 477 aa8.49□□□□□ -1.05
NF1-213ENST00000489712 COPS2P61201 443 aa8.49□□□□□ -1.05
NF1-213ENST00000489712 SULF1Q8IWU6 871 aa8.49□□□□□ -1.05
NF1-213ENST00000489712 CCDC102AQ96A19 550 aa8.49□□□□□ -1.05
NF1-213ENST00000489712 PHOX2BQ99453 314 aa8.49□□□□□ -1.05
NF1-213ENST00000489712 ACTN4O43707 911 aaKnown RBP8.48□□□□□ -1.05
NF1-213ENST00000489712 RDH13Q8NBN7 331 aa8.48□□□□□ -1.05
NF1-213ENST00000489712 DDX11L8A8MPP1 907 aa8.47□□□□□ -1.05
NF1-213ENST00000489712 RGS20O76081 388 aa8.46□□□□□ -1.06
NF1-213ENST00000489712 BLOC1S3Q6QNY0 202 aa8.45□□□□□ -1.06
NF1-213ENST00000489712 ZC3H15Q8WU90 426 aaKnown RBP8.45□□□□□ -1.06
NF1-213ENST00000489712 ZNF516Q92618 1163 aa8.45□□□□□ -1.06
NF1-213ENST00000489712 ZPR1O75312 459 aa8.44□□□□□ -1.06
NF1-213ENST00000489712 ZMYND10O75800 440 aa8.43□□□□□ -1.06
NF1-213ENST00000489712 MDM2Q00987 491 aaPredicted RBP8.43□□□□□ -1.06
NF1-213ENST00000489712 BARGINQ6ZT62 677 aa8.43□□□□□ -1.06
NF1-213ENST00000489712 KRI1Q8N9T8 703 aaKnown RBP8.43□□□□□ -1.06
NF1-213ENST00000489712 NR1I2O75469 434 aa8.42□□□□□ -1.06
NF1-213ENST00000489712 CLCN1P35523 988 aa8.41□□□□□ -1.06
NF1-213ENST00000489712 TLL1O43897 1013 aa8.4□□□□□ -1.06
NF1-213ENST00000489712 GGCXP38435 758 aa8.4□□□□□ -1.06
NF1-213ENST00000489712 NKX2-3Q8TAU0 364 aa8.4□□□□□ -1.06
NF1-213ENST00000489712 GPCPD1Q9NPB8 672 aa8.4□□□□□ -1.06
NF1-213ENST00000489712 GCGRP47871 477 aa8.39□□□□□ -1.07
NF1-213ENST00000489712 BCANQ96GW7 911 aa8.39□□□□□ -1.07
NF1-213ENST00000489712 CD46P15529 392 aa8.38□□□□□ -1.07
NF1-213ENST00000489712 FUT2Q10981 343 aa8.38□□□□□ -1.07
NF1-213ENST00000489712 PUS10Q3MIT2 529 aaKnown RBP8.38□□□□□ -1.07
NF1-213ENST00000489712 PPP1R18Q6NYC8 613 aa8.38□□□□□ -1.07
NF1-213ENST00000489712 ATP6V1AP38606 617 aa8.37□□□□□ -1.07
NF1-213ENST00000489712 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.37□□□□□ -1.07
NF1-213ENST00000489712 ADH1BP00325 375 aa8.36□□□□□ -1.07
NF1-213ENST00000489712 GRIPAP1Q4V328 841 aa8.36□□□□□ -1.07
NF1-213ENST00000489712 MORN1Q5T089 497 aa8.36□□□□□ -1.07
NF1-213ENST00000489712 TTLL12Q14166 644 aaPredicted RBP8.35□□□□□ -1.07
NF1-213ENST00000489712 AMHR2Q16671 573 aa8.35□□□□□ -1.07
NF1-213ENST00000489712 TMUB1Q9BVT8 246 aa8.35□□□□□ -1.07
NF1-213ENST00000489712 FAM217BQ9NTX9 383 aaPredicted RBP8.35□□□□□ -1.07
NF1-213ENST00000489712 SCUBE3Q8IX30 993 aa8.34□□□□□ -1.07
NF1-213ENST00000489712 KDM4AO75164 1064 aa8.32□□□□□ -1.08
NF1-213ENST00000489712 S1PR4O95977 384 aa8.32□□□□□ -1.08
NF1-213ENST00000489712 USP46P62068 366 aa8.32□□□□□ -1.08
NF1-213ENST00000489712 AK7Q96M32 723 aa8.31□□□□□ -1.08
NF1-213ENST00000489712 SPSB2Q99619 263 aa8.31□□□□□ -1.08
NF1-213ENST00000489712 PRKD2Q9BZL6 878 aa8.31□□□□□ -1.08
NF1-213ENST00000489712 SLC27A5Q9Y2P5 690 aa8.31□□□□□ -1.08
NF1-213ENST00000489712 RNF223E7ERA6 249 aa8.3□□□□□ -1.08
NF1-213ENST00000489712 FMNL1O95466 1100 aaPredicted RBP8.3□□□□□ -1.08
NF1-213ENST00000489712 GIGYF2Q6Y7W6 1299 aaKnown RBP8.3□□□□□ -1.08
NF1-213ENST00000489712 REPIN1Q9BWE0 567 aaKnown RBP8.3□□□□□ -1.08
NF1-213ENST00000489712 SLC6A16Q9GZN6 736 aa8.3□□□□□ -1.08
NF1-213ENST00000489712 THAP11Q96EK4 314 aa8.29□□□□□ -1.08
NF1-213ENST00000489712 IRX2Q9BZI1 471 aaPredicted RBP8.29□□□□□ -1.08
NF1-213ENST00000489712 SALL2Q9Y467 1007 aaPredicted RBP8.29□□□□□ -1.08
NF1-213ENST00000489712 V9GY48 417 aaPredicted RBP8.29□□□□□ -1.08
NF1-213ENST00000489712 TRIM66O15016 1216 aa8.28□□□□□ -1.08
NF1-213ENST00000489712 HOXA2O43364 376 aa8.28□□□□□ -1.08
NF1-213ENST00000489712 SSTR3P32745 418 aaPredicted RBP8.28□□□□□ -1.08
NF1-213ENST00000489712 Q3C1V9 767 aa8.28□□□□□ -1.08
NF1-213ENST00000489712 NUTM1Q86Y26 1132 aa8.28□□□□□ -1.08
NF1-213ENST00000489712 PARP9Q8IXQ6 854 aa8.28□□□□□ -1.08
NF1-213ENST00000489712 ANKLE1Q8NAG6 615 aa8.28□□□□□ -1.08
NF1-213ENST00000489712 RNF19BQ6ZMZ0 732 aa8.27□□□□□ -1.09
NF1-213ENST00000489712 SLC24A3Q9HC58 644 aa8.26□□□□□ -1.09
NF1-213ENST00000489712 MSS51Q4VC12 460 aa8.25□□□□□ -1.09
NF1-213ENST00000489712 BRICD5Q6PL45 260 aa8.25□□□□□ -1.09
NF1-213ENST00000489712 PPEF1O14829 653 aaPredicted RBP8.24□□□□□ -1.09
NF1-213ENST00000489712 HLA-CQ95604 372 aa8.24□□□□□ -1.09
NF1-213ENST00000489712 PDE4DQ08499 809 aa8.23□□□□□ -1.09
NF1-213ENST00000489712 PRDM9Q9NQV7 894 aa8.23□□□□□ -1.09
NF1-213ENST00000489712 SLC19A1P41440 591 aa8.22□□□□□ -1.09
NF1-213ENST00000489712 GUCA2AQ02747 115 aa8.22□□□□□ -1.09
NF1-213ENST00000489712 FAM160A2Q8N612 972 aaPredicted RBP8.22□□□□□ -1.09
NF1-213ENST00000489712 BEGAINQ9BUH8 593 aa8.22□□□□□ -1.09
NF1-213ENST00000489712 FCF1Q9Y324 198 aaKnown RBP8.22□□□□□ -1.09
NF1-213ENST00000489712 MS4A1P11836 297 aa8.21□□□□□ -1.1
NF1-213ENST00000489712 SPIRE2Q8WWL2 714 aa8.21□□□□□ -1.1
NF1-213ENST00000489712 USB1Q9BQ65 265 aaKnown RBP8.21□□□□□ -1.1
NF1-213ENST00000489712 FDX1P10109 184 aa8.2□□□□□ -1.1
NF1-213ENST00000489712 LAPTM4AQ15012 233 aa8.2□□□□□ -1.1
NF1-213ENST00000489712 DIXDC1Q155Q3 683 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms