RNA–Protein interactions for RNA: ENST00000488834.5

SSR1-209, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-209ENST00000488834 WBP1LQ9NX94 342 aa9.09□□□□□ -0.95
SSR1-209ENST00000488834 RNF40O75150 1001 aa9.08□□□□□ -0.96
SSR1-209ENST00000488834 SAMD7Q7Z3H4 446 aa9.08□□□□□ -0.96
SSR1-209ENST00000488834 TTLL12Q14166 644 aaPredicted RBP9.07□□□□□ -0.96
SSR1-209ENST00000488834 LRCH3Q96II8 777 aa9.07□□□□□ -0.96
SSR1-209ENST00000488834 NLRP7Q8WX94 980 aa9.06□□□□□ -0.96
SSR1-209ENST00000488834 TRIM66O15016 1216 aa9.05□□□□□ -0.96
SSR1-209ENST00000488834 MDM2Q00987 491 aaPredicted RBP9.05□□□□□ -0.96
SSR1-209ENST00000488834 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.05□□□□□ -0.96
SSR1-209ENST00000488834 PLA2G2EQ9NZK7 142 aa9.05□□□□□ -0.96
SSR1-209ENST00000488834 CLCN1P35523 988 aa9.04□□□□□ -0.96
SSR1-209ENST00000488834 SWT1Q5T5J6 900 aaKnown RBP9.04□□□□□ -0.96
SSR1-209ENST00000488834 PHOX2BQ99453 314 aa9.04□□□□□ -0.96
SSR1-209ENST00000488834 TMEM134Q9H6X4 195 aa9.04□□□□□ -0.96
SSR1-209ENST00000488834 SLF2Q8IX21 1173 aa9.03□□□□□ -0.96
SSR1-209ENST00000488834 HPS5Q9UPZ3 1129 aa9.03□□□□□ -0.96
SSR1-209ENST00000488834 RSPH4AQ5TD94 716 aa9.02□□□□□ -0.97
SSR1-209ENST00000488834 PDE4DQ08499 809 aa9.01□□□□□ -0.97
SSR1-209ENST00000488834 AMHR2Q16671 573 aa9.01□□□□□ -0.97
SSR1-209ENST00000488834 SULF1Q8IWU6 871 aa9.01□□□□□ -0.97
SSR1-209ENST00000488834 GPCPD1Q9NPB8 672 aa9.01□□□□□ -0.97
SSR1-209ENST00000488834 DAXXQ9UER7 740 aaPredicted RBP9.01□□□□□ -0.97
SSR1-209ENST00000488834 DDX11L8A8MPP1 907 aa9□□□□□ -0.97
SSR1-209ENST00000488834 RDH13Q8NBN7 331 aa9□□□□□ -0.97
SSR1-209ENST00000488834 NECTIN2Q92692 538 aa9□□□□□ -0.97
SSR1-209ENST00000488834 PPP4CP60510 307 aa8.99□□□□□ -0.97
SSR1-209ENST00000488834 NEUROD2Q15784 382 aa8.98□□□□□ -0.97
SSR1-209ENST00000488834 APLP1P51693 650 aa8.97□□□□□ -0.97
SSR1-209ENST00000488834 PARP9Q8IXQ6 854 aa8.97□□□□□ -0.97
SSR1-209ENST00000488834 TSR3Q9UJK0 312 aaKnown RBP8.97□□□□□ -0.97
SSR1-209ENST00000488834 GIGYF2Q6Y7W6 1299 aaKnown RBP8.96□□□□□ -0.98
SSR1-209ENST00000488834 SSTR3P32745 418 aaPredicted RBP8.94□□□□□ -0.98
SSR1-209ENST00000488834 FAM217BQ9NTX9 383 aaPredicted RBP8.94□□□□□ -0.98
SSR1-209ENST00000488834 SLC10A3P09131 477 aa8.93□□□□□ -0.98
SSR1-209ENST00000488834 KMT5BQ4FZB7 885 aa8.93□□□□□ -0.98
SSR1-209ENST00000488834 GPBP1L1Q9HC44 474 aaPredicted RBP8.93□□□□□ -0.98
SSR1-209ENST00000488834 ITGBL1O95965 494 aaPredicted RBP8.92□□□□□ -0.98
SSR1-209ENST00000488834 CFHP08603 1231 aa8.92□□□□□ -0.98
SSR1-209ENST00000488834 REPIN1Q9BWE0 567 aaKnown RBP8.92□□□□□ -0.98
SSR1-209ENST00000488834 PRR14Q9BWN1 585 aa8.92□□□□□ -0.98
SSR1-209ENST00000488834 KDM4CQ9H3R0 1056 aa8.92□□□□□ -0.98
SSR1-209ENST00000488834 TJAP1Q5JTD0 557 aa8.91□□□□□ -0.98
SSR1-209ENST00000488834 NYAP1Q6ZVC0 841 aa8.91□□□□□ -0.98
SSR1-209ENST00000488834 ZNF516Q92618 1163 aa8.91□□□□□ -0.98
SSR1-209ENST00000488834 TMUB1Q9BVT8 246 aa8.9□□□□□ -0.98
SSR1-209ENST00000488834 CD46P15529 392 aa8.89□□□□□ -0.99
SSR1-209ENST00000488834 BRPF1P55201 1214 aaPredicted RBP8.89□□□□□ -0.99
SSR1-209ENST00000488834 NUTM1Q86Y26 1132 aa8.89□□□□□ -0.99
SSR1-209ENST00000488834 BEGAINQ9BUH8 593 aa8.89□□□□□ -0.99
SSR1-209ENST00000488834 MTRQ99707 1265 aa8.88□□□□□ -0.99
SSR1-209ENST00000488834 A0A0G2JS52 829 aa8.87□□□□□ -0.99
SSR1-209ENST00000488834 MS4A1P11836 297 aa8.87□□□□□ -0.99
SSR1-209ENST00000488834 GCGRP47871 477 aa8.87□□□□□ -0.99
SSR1-209ENST00000488834 NKX2-3Q8TAU0 364 aa8.87□□□□□ -0.99
SSR1-209ENST00000488834 GRIPAP1Q4V328 841 aa8.86□□□□□ -0.99
SSR1-209ENST00000488834 KDM4AO75164 1064 aa8.85□□□□□ -0.99
SSR1-209ENST00000488834 IFFO2Q5TF58 517 aa8.85□□□□□ -0.99
SSR1-209ENST00000488834 DDRGK1Q96HY6 314 aa8.85□□□□□ -0.99
SSR1-209ENST00000488834 PCDHB3Q9Y5E6 796 aa8.85□□□□□ -0.99
SSR1-209ENST00000488834 ACTN4O43707 911 aaKnown RBP8.84□□□□□ -0.99
SSR1-209ENST00000488834 COPS2P61201 443 aa8.84□□□□□ -0.99
SSR1-209ENST00000488834 ATP1B4Q9UN42 357 aaPredicted RBP8.84□□□□□ -0.99
SSR1-209ENST00000488834 FUT2Q10981 343 aa8.83□□□□□ -1
SSR1-209ENST00000488834 DIXDC1Q155Q3 683 aa8.83□□□□□ -1
SSR1-209ENST00000488834 TLL1O43897 1013 aa8.82□□□□□ -1
SSR1-209ENST00000488834 USP46P62068 366 aa8.82□□□□□ -1
SSR1-209ENST00000488834 BLOC1S3Q6QNY0 202 aa8.82□□□□□ -1
SSR1-209ENST00000488834 IL27Q8NEV9 243 aa8.82□□□□□ -1
SSR1-209ENST00000488834 FAM117AQ9C073 453 aa8.82□□□□□ -1
SSR1-209ENST00000488834 ATP6V1AP38606 617 aa8.81□□□□□ -1
SSR1-209ENST00000488834 KCNC4Q03721 635 aa8.8□□□□□ -1
SSR1-209ENST00000488834 PUS10Q3MIT2 529 aaKnown RBP8.8□□□□□ -1
SSR1-209ENST00000488834 SPIRE2Q8WWL2 714 aa8.8□□□□□ -1
SSR1-209ENST00000488834 TBC1D2Q9BYX2 928 aa8.8□□□□□ -1
SSR1-209ENST00000488834 RSPH6AQ9H0K4 717 aa8.8□□□□□ -1
SSR1-209ENST00000488834 NR1I2O75469 434 aa8.79□□□□□ -1
SSR1-209ENST00000488834 HOXA2O43364 376 aa8.77□□□□□ -1.01
SSR1-209ENST00000488834 IL21Q9HBE4 155 aa8.77□□□□□ -1.01
SSR1-209ENST00000488834 FDX1P10109 184 aa8.75□□□□□ -1.01
SSR1-209ENST00000488834 MORN1Q5T089 497 aa8.75□□□□□ -1.01
SSR1-209ENST00000488834 EMID1Q96A84 441 aaPredicted RBP8.75□□□□□ -1.01
SSR1-209ENST00000488834 PLEKHG3A1L390 1219 aa8.74□□□□□ -1.01
SSR1-209ENST00000488834 MOXD2PA6NHM9 499 aa8.74□□□□□ -1.01
SSR1-209ENST00000488834 NDUFV2P19404 249 aa8.74□□□□□ -1.01
SSR1-209ENST00000488834 Q3C1V9 767 aa8.74□□□□□ -1.01
SSR1-209ENST00000488834 MYSM1Q5VVJ2 828 aa8.74□□□□□ -1.01
SSR1-209ENST00000488834 HLA-CQ95604 372 aa8.74□□□□□ -1.01
SSR1-209ENST00000488834 POLR3EQ9NVU0 708 aa8.74□□□□□ -1.01
SSR1-209ENST00000488834 SLC27A5Q9Y2P5 690 aa8.74□□□□□ -1.01
SSR1-209ENST00000488834 ZPR1O75312 459 aa8.73□□□□□ -1.01
SSR1-209ENST00000488834 GUCA2AQ02747 115 aa8.73□□□□□ -1.01
SSR1-209ENST00000488834 CSPP1Q1MSJ5 1256 aa8.73□□□□□ -1.01
SSR1-209ENST00000488834 PPP1R18Q6NYC8 613 aa8.73□□□□□ -1.01
SSR1-209ENST00000488834 RIC3Q7Z5B4 369 aa8.73□□□□□ -1.01
SSR1-209ENST00000488834 SCUBE3Q8IX30 993 aa8.73□□□□□ -1.01
SSR1-209ENST00000488834 CLK2P49760 499 aaKnown RBP8.72□□□□□ -1.01
SSR1-209ENST00000488834 C6orf229H3BNL8 230 aa8.71□□□□□ -1.02
SSR1-209ENST00000488834 FMNL1O95466 1100 aaPredicted RBP8.71□□□□□ -1.02
SSR1-209ENST00000488834 SH3D19Q5HYK7 790 aa8.71□□□□□ -1.02
SSR1-209ENST00000488834 RSBN1LQ6PCB5 846 aaPredicted RBP8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms