RNA–Protein interactions for RNA: ENST00000488443.1

UBAP2-211, Transcript of ubiquitin associated protein 2, humanhuman

TSL 5

Gene UBAP2, Length 492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP2-211ENST00000488443 TET3O43151 1660 aa20.56■□□□□ 0.88
UBAP2-211ENST00000488443 ROBO1Q9Y6N7 1651 aa20.56■□□□□ 0.88
UBAP2-211ENST00000488443 ITGAEP38570 1179 aa20.54■□□□□ 0.88
UBAP2-211ENST00000488443 NUTM2DQ5VT03 806 aaPredicted RBP20.54■□□□□ 0.88
UBAP2-211ENST00000488443 SLC52A1Q9NWF4 448 aa20.53■□□□□ 0.88
UBAP2-211ENST00000488443 PPARGC1BQ86YN6 1023 aaKnown RBP20.52■□□□□ 0.88
UBAP2-211ENST00000488443 RIMS2Q9UQ26 1411 aa20.51■□□□□ 0.87
UBAP2-211ENST00000488443 NWD1Q149M9 1564 aa20.51■□□□□ 0.87
UBAP2-211ENST00000488443 RPRD2Q5VT52 1461 aaKnown RBP20.5■□□□□ 0.87
UBAP2-211ENST00000488443 FAM135BQ49AJ0 1406 aa20.49■□□□□ 0.87
UBAP2-211ENST00000488443 UNC13BO14795 1591 aa20.49■□□□□ 0.87
UBAP2-211ENST00000488443 NKTRP30414 1462 aaKnown RBP20.49■□□□□ 0.87
UBAP2-211ENST00000488443 TMEM131LA2VDJ0 1609 aa20.49■□□□□ 0.87
UBAP2-211ENST00000488443 E9PCH4 1651 aa20.48■□□□□ 0.87
UBAP2-211ENST00000488443 MSH6P52701 1360 aa20.48■□□□□ 0.87
UBAP2-211ENST00000488443 RGS17Q9UGC6 210 aaPredicted RBP20.48■□□□□ 0.87
UBAP2-211ENST00000488443 ZFYVE9O95405 1425 aa20.47■□□□□ 0.87
UBAP2-211ENST00000488443 C14orf37Q86TY3 774 aa20.47■□□□□ 0.87
UBAP2-211ENST00000488443 PHLPP1O60346 1717 aa20.47■□□□□ 0.87
UBAP2-211ENST00000488443 CHD2O14647 1828 aaKnown RBP20.46■□□□□ 0.87
UBAP2-211ENST00000488443 PLEKHG1Q9ULL1 1385 aa20.46■□□□□ 0.87
UBAP2-211ENST00000488443 HDGFP51858 240 aaKnown RBP20.42■□□□□ 0.86
UBAP2-211ENST00000488443 POTEAQ6S8J7 498 aa20.41■□□□□ 0.86
UBAP2-211ENST00000488443 SLAIN2Q9P270 581 aa20.41■□□□□ 0.86
UBAP2-211ENST00000488443 IQGAP3Q86VI3 1631 aa20.41■□□□□ 0.86
UBAP2-211ENST00000488443 NUP155O75694 1391 aa20.4■□□□□ 0.86
UBAP2-211ENST00000488443 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.38■□□□□ 0.85
UBAP2-211ENST00000488443 TBX22Q9Y458 520 aa20.36■□□□□ 0.85
UBAP2-211ENST00000488443 SETD1AO15047 1707 aaKnown RBP20.36■□□□□ 0.85
UBAP2-211ENST00000488443 ADAMTS13Q76LX8 1427 aa20.36■□□□□ 0.85
UBAP2-211ENST00000488443 ROCK1Q13464 1354 aa20.35■□□□□ 0.85
UBAP2-211ENST00000488443 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.35■□□□□ 0.85
UBAP2-211ENST00000488443 DIP2AQ14689 1571 aa20.33■□□□□ 0.84
UBAP2-211ENST00000488443 JCADQ9P266 1359 aa20.33■□□□□ 0.84
UBAP2-211ENST00000488443 COL16A1Q07092 1604 aaPredicted RBP20.32■□□□□ 0.84
UBAP2-211ENST00000488443 ATF3P18847 181 aa20.32■□□□□ 0.84
UBAP2-211ENST00000488443 ZNF326Q5BKZ1 582 aaKnown RBP20.32■□□□□ 0.84
UBAP2-211ENST00000488443 SPHKAPQ2M3C7 1700 aa20.32■□□□□ 0.84
UBAP2-211ENST00000488443 TRPM2O94759 1503 aa20.32■□□□□ 0.84
UBAP2-211ENST00000488443 MEX3CQ5U5Q3 659 aaKnown RBP20.31■□□□□ 0.84
UBAP2-211ENST00000488443 AMOTL2Q9Y2J4 779 aa20.3■□□□□ 0.84
UBAP2-211ENST00000488443 PTPRUQ92729 1446 aa20.29■□□□□ 0.84
UBAP2-211ENST00000488443 CADPS2Q86UW7 1296 aa20.27■□□□□ 0.84
UBAP2-211ENST00000488443 C19orf44Q9H6X5 657 aa20.27■□□□□ 0.84
UBAP2-211ENST00000488443 LRP6O75581 1613 aa20.27■□□□□ 0.83
UBAP2-211ENST00000488443 NRXN3Q9Y4C0 1643 aa20.26■□□□□ 0.83
UBAP2-211ENST00000488443 NUTM2BA6NNL0 878 aaPredicted RBP20.25■□□□□ 0.83
UBAP2-211ENST00000488443 NUTM2EB1AL46 878 aaPredicted RBP20.25■□□□□ 0.83
UBAP2-211ENST00000488443 NUTM2AQ8IVF1 878 aaPredicted RBP20.25■□□□□ 0.83
UBAP2-211ENST00000488443 PIK3R4Q99570 1358 aa20.24■□□□□ 0.83
UBAP2-211ENST00000488443 NCOA3Q9Y6Q9 1424 aa20.24■□□□□ 0.83
UBAP2-211ENST00000488443 CLTCL1P53675 1640 aa20.23■□□□□ 0.83
UBAP2-211ENST00000488443 AHDC1Q5TGY3 1603 aaPredicted RBP20.23■□□□□ 0.83
UBAP2-211ENST00000488443 TRIM52Q96A61 297 aa20.22■□□□□ 0.83
UBAP2-211ENST00000488443 XRN1Q8IZH2 1706 aaKnown RBP20.22■□□□□ 0.83
UBAP2-211ENST00000488443 BRINP3Q76B58 766 aa20.21■□□□□ 0.83
UBAP2-211ENST00000488443 SHPRHQ149N8 1683 aa20.2■□□□□ 0.82
UBAP2-211ENST00000488443 SETBP1Q9Y6X0 1596 aa20.2■□□□□ 0.82
UBAP2-211ENST00000488443 METP08581 1390 aa20.2■□□□□ 0.82
UBAP2-211ENST00000488443 SPATA31A6Q5VVP1 1343 aa20.19■□□□□ 0.82
UBAP2-211ENST00000488443 KIF1BO60333 1816 aa20.18■□□□□ 0.82
UBAP2-211ENST00000488443 ASXL1Q8IXJ9 1541 aa20.17■□□□□ 0.82
UBAP2-211ENST00000488443 DDX17Q92841 729 aaKnown RBP20.17■□□□□ 0.82
UBAP2-211ENST00000488443 NEXMIFQ5QGS0 1516 aa20.17■□□□□ 0.82
UBAP2-211ENST00000488443 NALCNQ8IZF0 1738 aa20.16■□□□□ 0.82
UBAP2-211ENST00000488443 MST1RQ04912 1400 aa20.15■□□□□ 0.82
UBAP2-211ENST00000488443 ZNF772Q68DY9 489 aaPredicted RBP20.14■□□□□ 0.81
UBAP2-211ENST00000488443 NHSL1Q5SYE7 1610 aa20.13■□□□□ 0.81
UBAP2-211ENST00000488443 DCCP43146 1447 aa20.12■□□□□ 0.81
UBAP2-211ENST00000488443 NAIPQ13075 1403 aa20.11■□□□□ 0.81
UBAP2-211ENST00000488443 ADGRL3Q9HAR2 1447 aa20.1■□□□□ 0.81
UBAP2-211ENST00000488443 AFF2P51816 1311 aa20.09■□□□□ 0.81
UBAP2-211ENST00000488443 RRBP1Q9P2E9 1410 aaKnown RBP20.09■□□□□ 0.81
UBAP2-211ENST00000488443 C8orf37Q96NL8 207 aa20.08■□□□□ 0.81
UBAP2-211ENST00000488443 RXRBP28702 533 aa20.07■□□□□ 0.8
UBAP2-211ENST00000488443 SETD5Q9C0A6 1442 aa20.05■□□□□ 0.8
UBAP2-211ENST00000488443 LRRC59Q96AG4 307 aaKnown RBP20.05■□□□□ 0.8
UBAP2-211ENST00000488443 SLC4A1APQ9BWU0 796 aaKnown RBP20.05■□□□□ 0.8
UBAP2-211ENST00000488443 ADAMTS2O95450 1211 aa20.04■□□□□ 0.8
UBAP2-211ENST00000488443 FOXD1Q16676 465 aa20.04■□□□□ 0.8
UBAP2-211ENST00000488443 UPF1Q92900 1129 aaKnown RBP eCLIP20.03■□□□□ 0.8
UBAP2-211ENST00000488443 PNPLA6Q8IY17 1366 aa20.03■□□□□ 0.8
UBAP2-211ENST00000488443 ROBO2Q9HCK4 1378 aa20.03■□□□□ 0.8
UBAP2-211ENST00000488443 VGFO15240 615 aaPredicted RBP20.02■□□□□ 0.8
UBAP2-211ENST00000488443 C1orf167Q5SNV9 1468 aa20.02■□□□□ 0.8
UBAP2-211ENST00000488443 PPLO60437 1756 aa20.01■□□□□ 0.79
UBAP2-211ENST00000488443 ORAI2Q96SN7 254 aa20.01■□□□□ 0.79
UBAP2-211ENST00000488443 HFM1A2PYH4 1435 aa19.99■□□□□ 0.79
UBAP2-211ENST00000488443 NGLY1Q96IV0 654 aa19.98■□□□□ 0.79
UBAP2-211ENST00000488443 QTRT2Q9H974 415 aaKnown RBP19.98■□□□□ 0.79
UBAP2-211ENST00000488443 PTCH1Q13635 1447 aa19.98■□□□□ 0.79
UBAP2-211ENST00000488443 RGL3Q3MIN7 710 aa19.97■□□□□ 0.79
UBAP2-211ENST00000488443 NUTM2FA1L443 756 aa19.96■□□□□ 0.79
UBAP2-211ENST00000488443 STK26Q9P289 416 aa19.96■□□□□ 0.79
UBAP2-211ENST00000488443 RGS12O14924 1447 aa19.95■□□□□ 0.78
UBAP2-211ENST00000488443 XPCQ01831 940 aaPredicted RBP19.94■□□□□ 0.78
UBAP2-211ENST00000488443 RPGRIP1LQ68CZ1 1315 aa19.93■□□□□ 0.78
UBAP2-211ENST00000488443 CDK12Q9NYV4 1490 aaPredicted RBP19.92■□□□□ 0.78
UBAP2-211ENST00000488443 ESCO1Q5FWF5 840 aa19.92■□□□□ 0.78
UBAP2-211ENST00000488443 ADGRF5Q8IZF2 1346 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms