RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 STAC3Q96MF2 364 aa8.34□□□□□ -1.07
ECHDC1-217ENST00000488087 REPIN1Q9BWE0 567 aaKnown RBP8.33□□□□□ -1.08
ECHDC1-217ENST00000488087 IRX2Q9BZI1 471 aaPredicted RBP8.33□□□□□ -1.08
ECHDC1-217ENST00000488087 HDGFP51858 240 aaKnown RBP8.32□□□□□ -1.08
ECHDC1-217ENST00000488087 FAM98CQ17RN3 349 aaKnown RBP8.32□□□□□ -1.08
ECHDC1-217ENST00000488087 MRPL50Q8N5N7 158 aaKnown RBP8.32□□□□□ -1.08
ECHDC1-217ENST00000488087 KCTD12Q96CX2 325 aaKnown RBP8.31□□□□□ -1.08
ECHDC1-217ENST00000488087 TMEM134Q9H6X4 195 aa8.31□□□□□ -1.08
ECHDC1-217ENST00000488087 DAXXQ9UER7 740 aaPredicted RBP8.31□□□□□ -1.08
ECHDC1-217ENST00000488087 BHMG1C9JSJ3 638 aaPredicted RBP8.3□□□□□ -1.08
ECHDC1-217ENST00000488087 SSTR3P32745 418 aaPredicted RBP8.3□□□□□ -1.08
ECHDC1-217ENST00000488087 LAPTM4BQ86VI4 370 aa8.3□□□□□ -1.08
ECHDC1-217ENST00000488087 IL27Q8NEV9 243 aa8.3□□□□□ -1.08
ECHDC1-217ENST00000488087 TMUB1Q9BVT8 246 aa8.3□□□□□ -1.08
ECHDC1-217ENST00000488087 MS4A1P11836 297 aa8.29□□□□□ -1.08
ECHDC1-217ENST00000488087 FAM117AQ9C073 453 aa8.29□□□□□ -1.08
ECHDC1-217ENST00000488087 FAM217BQ9NTX9 383 aaPredicted RBP8.29□□□□□ -1.08
ECHDC1-217ENST00000488087 GOLGA8CPA6NN73 597 aa8.28□□□□□ -1.08
ECHDC1-217ENST00000488087 DDX11L8A8MPP1 907 aa8.28□□□□□ -1.08
ECHDC1-217ENST00000488087 HRO43593 1189 aa8.28□□□□□ -1.08
ECHDC1-217ENST00000488087 SLC4A3P48751 1232 aa8.28□□□□□ -1.08
ECHDC1-217ENST00000488087 TMEM132AQ24JP5 1023 aa8.28□□□□□ -1.08
ECHDC1-217ENST00000488087 SULF1Q8IWU6 871 aa8.28□□□□□ -1.08
ECHDC1-217ENST00000488087 DDRGK1Q96HY6 314 aa8.28□□□□□ -1.08
ECHDC1-217ENST00000488087 RNF40O75150 1001 aa8.27□□□□□ -1.09
ECHDC1-217ENST00000488087 SWT1Q5T5J6 900 aaKnown RBP8.27□□□□□ -1.09
ECHDC1-217ENST00000488087 ZFRQ96KR1 1074 aaKnown RBP8.27□□□□□ -1.09
ECHDC1-217ENST00000488087 SAMD7Q7Z3H4 446 aa8.26□□□□□ -1.09
ECHDC1-217ENST00000488087 RDH13Q8NBN7 331 aa8.26□□□□□ -1.09
ECHDC1-217ENST00000488087 BEGAINQ9BUH8 593 aa8.25□□□□□ -1.09
ECHDC1-217ENST00000488087 RSPH4AQ5TD94 716 aa8.24□□□□□ -1.09
ECHDC1-217ENST00000488087 SLF2Q8IX21 1173 aa8.24□□□□□ -1.09
ECHDC1-217ENST00000488087 IFFO2Q5TF58 517 aa8.23□□□□□ -1.09
ECHDC1-217ENST00000488087 ANKK1Q8NFD2 765 aa8.23□□□□□ -1.09
ECHDC1-217ENST00000488087 LRCH3Q96II8 777 aa8.23□□□□□ -1.09
ECHDC1-217ENST00000488087 PTPN5P54829 565 aa8.22□□□□□ -1.09
ECHDC1-217ENST00000488087 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.22□□□□□ -1.09
ECHDC1-217ENST00000488087 PLEKHG3A1L390 1219 aa8.21□□□□□ -1.1
ECHDC1-217ENST00000488087 CD46P15529 392 aa8.21□□□□□ -1.1
ECHDC1-217ENST00000488087 WNT2BQ93097 391 aa8.21□□□□□ -1.1
ECHDC1-217ENST00000488087 NUTM1Q86Y26 1132 aa8.19□□□□□ -1.1
ECHDC1-217ENST00000488087 RSPH6AQ9H0K4 717 aa8.19□□□□□ -1.1
ECHDC1-217ENST00000488087 ATP1B4Q9UN42 357 aaPredicted RBP8.19□□□□□ -1.1
ECHDC1-217ENST00000488087 A0A0G2JS52 829 aa8.18□□□□□ -1.1
ECHDC1-217ENST00000488087 SLC10A3P09131 477 aa8.18□□□□□ -1.1
ECHDC1-217ENST00000488087 BCAMP50895 628 aa8.18□□□□□ -1.1
ECHDC1-217ENST00000488087 NECTIN2Q92692 538 aa8.18□□□□□ -1.1
ECHDC1-217ENST00000488087 SOWAHBA6NEL2 793 aa8.17□□□□□ -1.1
ECHDC1-217ENST00000488087 DIXDC1Q155Q3 683 aa8.17□□□□□ -1.1
ECHDC1-217ENST00000488087 TBC1D2Q9BYX2 928 aa8.17□□□□□ -1.1
ECHDC1-217ENST00000488087 HPS5Q9UPZ3 1129 aa8.17□□□□□ -1.1
ECHDC1-217ENST00000488087 CFHP08603 1231 aa8.16□□□□□ -1.1
ECHDC1-217ENST00000488087 GCGRP47871 477 aa8.16□□□□□ -1.1
ECHDC1-217ENST00000488087 PPP4CP60510 307 aa8.16□□□□□ -1.1
ECHDC1-217ENST00000488087 KDM4AO75164 1064 aa8.15□□□□□ -1.1
ECHDC1-217ENST00000488087 KMT5BQ4FZB7 885 aa8.15□□□□□ -1.1
ECHDC1-217ENST00000488087 SPIRE2Q8WWL2 714 aa8.15□□□□□ -1.1
ECHDC1-217ENST00000488087 PCMTD1Q96MG8 357 aaPredicted RBP8.15□□□□□ -1.1
ECHDC1-217ENST00000488087 SH3D19Q5HYK7 790 aa8.14□□□□□ -1.11
ECHDC1-217ENST00000488087 MYSM1Q5VVJ2 828 aa8.14□□□□□ -1.11
ECHDC1-217ENST00000488087 POLR3EQ9NVU0 708 aa8.14□□□□□ -1.11
ECHDC1-217ENST00000488087 TSR3Q9UJK0 312 aaKnown RBP8.14□□□□□ -1.11
ECHDC1-217ENST00000488087 SKIV2LQ15477 1246 aaKnown RBP8.13□□□□□ -1.11
ECHDC1-217ENST00000488087 GOPCQ9HD26 462 aa8.13□□□□□ -1.11
ECHDC1-217ENST00000488087 USP46P62068 366 aa8.12□□□□□ -1.11
ECHDC1-217ENST00000488087 THSD4Q6ZMP0 1018 aa8.12□□□□□ -1.11
ECHDC1-217ENST00000488087 Q6ZNB5 142 aa8.12□□□□□ -1.11
ECHDC1-217ENST00000488087 PRR14Q9BWN1 585 aa8.12□□□□□ -1.11
ECHDC1-217ENST00000488087 MOXD2PA6NHM9 499 aa8.11□□□□□ -1.11
ECHDC1-217ENST00000488087 CLK2P49760 499 aaKnown RBP8.11□□□□□ -1.11
ECHDC1-217ENST00000488087 FUT2Q10981 343 aa8.11□□□□□ -1.11
ECHDC1-217ENST00000488087 GRIPAP1Q4V328 841 aa8.11□□□□□ -1.11
ECHDC1-217ENST00000488087 RIC3Q7Z5B4 369 aa8.11□□□□□ -1.11
ECHDC1-217ENST00000488087 GTF3C3Q9Y5Q9 886 aa8.11□□□□□ -1.11
ECHDC1-217ENST00000488087 WBP1LQ9NX94 342 aa8.1□□□□□ -1.11
ECHDC1-217ENST00000488087 HOXA2O43364 376 aa8.09□□□□□ -1.11
ECHDC1-217ENST00000488087 NDUFV2P19404 249 aa8.09□□□□□ -1.11
ECHDC1-217ENST00000488087 ATP6V1AP38606 617 aa8.09□□□□□ -1.11
ECHDC1-217ENST00000488087 CSPP1Q1MSJ5 1256 aa8.09□□□□□ -1.11
ECHDC1-217ENST00000488087 ACTN4O43707 911 aaKnown RBP8.08□□□□□ -1.12
ECHDC1-217ENST00000488087 APLP1P51693 650 aa8.08□□□□□ -1.12
ECHDC1-217ENST00000488087 RSBN1LQ6PCB5 846 aaPredicted RBP8.08□□□□□ -1.12
ECHDC1-217ENST00000488087 PROCA1Q8NCQ7 364 aaPredicted RBP8.08□□□□□ -1.12
ECHDC1-217ENST00000488087 LIMD1Q9UGP4 676 aa8.08□□□□□ -1.12
ECHDC1-217ENST00000488087 SPTLC1O15269 473 aa8.07□□□□□ -1.12
ECHDC1-217ENST00000488087 FDX1P10109 184 aa8.07□□□□□ -1.12
ECHDC1-217ENST00000488087 GUCA2AQ02747 115 aa8.07□□□□□ -1.12
ECHDC1-217ENST00000488087 PUS10Q3MIT2 529 aaKnown RBP8.07□□□□□ -1.12
ECHDC1-217ENST00000488087 HLA-CQ95604 372 aa8.07□□□□□ -1.12
ECHDC1-217ENST00000488087 PCDHB3Q9Y5E6 796 aa8.06□□□□□ -1.12
ECHDC1-217ENST00000488087 GJA5P36382 358 aa8.05□□□□□ -1.12
ECHDC1-217ENST00000488087 NUTM2BA6NNL0 878 aaPredicted RBP8.04□□□□□ -1.12
ECHDC1-217ENST00000488087 NUTM2EB1AL46 878 aaPredicted RBP8.04□□□□□ -1.12
ECHDC1-217ENST00000488087 NUTM2DQ5VT03 806 aaPredicted RBP8.04□□□□□ -1.12
ECHDC1-217ENST00000488087 NYAP1Q6ZVC0 841 aa8.04□□□□□ -1.12
ECHDC1-217ENST00000488087 NUTM2AQ8IVF1 878 aaPredicted RBP8.04□□□□□ -1.12
ECHDC1-217ENST00000488087 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.04□□□□□ -1.12
ECHDC1-217ENST00000488087 PCDHB15Q9Y5E8 787 aa8.04□□□□□ -1.12
ECHDC1-217ENST00000488087 TUSC1Q2TAM9 212 aa8.03□□□□□ -1.12
ECHDC1-217ENST00000488087 MORN1Q5T089 497 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms