RNA–Protein interactions for RNA: ENST00000488035.5

R3HDM1-219, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-219ENST00000488035 ARIH1Q9Y4X5 557 aaPredicted RBP7.77□□□□□ -1.17
R3HDM1-219ENST00000488035 GRXCR2A6NFK2 248 aa7.75□□□□□ -1.17
R3HDM1-219ENST00000488035 E2F4Q16254 413 aa7.75□□□□□ -1.17
R3HDM1-219ENST00000488035 SWT1Q5T5J6 900 aaKnown RBP7.75□□□□□ -1.17
R3HDM1-219ENST00000488035 CRIPAKQ8N1N5 446 aa7.75□□□□□ -1.17
R3HDM1-219ENST00000488035 BBXQ8WY36 941 aaPredicted RBP7.75□□□□□ -1.17
R3HDM1-219ENST00000488035 LIAT1Q6ZQX7 453 aa7.74□□□□□ -1.17
R3HDM1-219ENST00000488035 AAASQ9NRG9 546 aa7.74□□□□□ -1.17
R3HDM1-219ENST00000488035 WIPF1O43516 503 aa7.73□□□□□ -1.17
R3HDM1-219ENST00000488035 STK17AQ9UEE5 414 aa7.73□□□□□ -1.17
R3HDM1-219ENST00000488035 ZNF697Q5TEC3 545 aa7.72□□□□□ -1.17
R3HDM1-219ENST00000488035 LMOD2Q6P5Q4 547 aa7.72□□□□□ -1.17
R3HDM1-219ENST00000488035 WDR70Q9NW82 654 aa7.72□□□□□ -1.17
R3HDM1-219ENST00000488035 PCDHB3Q9Y5E6 796 aa7.72□□□□□ -1.17
R3HDM1-219ENST00000488035 FAM187AA6NFU0 413 aa7.71□□□□□ -1.18
R3HDM1-219ENST00000488035 OSBPP22059 807 aa7.71□□□□□ -1.18
R3HDM1-219ENST00000488035 EYA1Q99502 592 aa7.71□□□□□ -1.18
R3HDM1-219ENST00000488035 ST8SIA5O15466 376 aa7.7□□□□□ -1.18
R3HDM1-219ENST00000488035 BLOC1S3Q6QNY0 202 aa7.7□□□□□ -1.18
R3HDM1-219ENST00000488035 CDHR5Q9HBB8 845 aa7.7□□□□□ -1.18
R3HDM1-219ENST00000488035 DACH1Q9UI36 760 aa7.7□□□□□ -1.18
R3HDM1-219ENST00000488035 SPRYD3Q8NCJ5 442 aa7.69□□□□□ -1.18
R3HDM1-219ENST00000488035 NPDC1Q9NQX5 325 aaPredicted RBP7.69□□□□□ -1.18
R3HDM1-219ENST00000488035 PPEF1O14829 653 aaPredicted RBP7.68□□□□□ -1.18
R3HDM1-219ENST00000488035 AVPP01185 164 aa7.68□□□□□ -1.18
R3HDM1-219ENST00000488035 WFS1O76024 890 aa7.67□□□□□ -1.18
R3HDM1-219ENST00000488035 NFX1Q12986 1120 aaKnown RBP7.67□□□□□ -1.18
R3HDM1-219ENST00000488035 TNFRSF10AO00220 468 aa7.66□□□□□ -1.18
R3HDM1-219ENST00000488035 LCE2CQ5TA81 110 aa7.66□□□□□ -1.18
R3HDM1-219ENST00000488035 PADI6Q6TGC4 694 aa7.66□□□□□ -1.18
R3HDM1-219ENST00000488035 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.66□□□□□ -1.18
R3HDM1-219ENST00000488035 LOC100996750A0A140TA64 210 aa7.65□□□□□ -1.18
R3HDM1-219ENST00000488035 ACTN4O43707 911 aaKnown RBP7.65□□□□□ -1.18
R3HDM1-219ENST00000488035 TLL1O43897 1013 aa7.65□□□□□ -1.18
R3HDM1-219ENST00000488035 S1PR4O95977 384 aa7.65□□□□□ -1.18
R3HDM1-219ENST00000488035 KRTAP4-6Q9BYQ5 205 aa7.65□□□□□ -1.18
R3HDM1-219ENST00000488035 PKD2L1Q9P0L9 805 aa7.65□□□□□ -1.18
R3HDM1-219ENST00000488035 ADH1BP00325 375 aa7.64□□□□□ -1.19
R3HDM1-219ENST00000488035 SMCPP49901 116 aaPredicted RBP7.64□□□□□ -1.19
R3HDM1-219ENST00000488035 INSM1Q01101 510 aaPredicted RBP7.64□□□□□ -1.19
R3HDM1-219ENST00000488035 CTC1Q2NKJ3 1217 aa7.62□□□□□ -1.19
R3HDM1-219ENST00000488035 PLA2G2CQ5R387 149 aa7.62□□□□□ -1.19
R3HDM1-219ENST00000488035 TOR4AQ9NXH8 423 aa7.62□□□□□ -1.19
R3HDM1-219ENST00000488035 TMEM134Q9H6X4 195 aa7.6□□□□□ -1.19
R3HDM1-219ENST00000488035 DNAJB2P25686 324 aa7.59□□□□□ -1.19
R3HDM1-219ENST00000488035 KMT5BQ4FZB7 885 aa7.59□□□□□ -1.19
R3HDM1-219ENST00000488035 GMPR2Q9P2T1 348 aaKnown RBP7.59□□□□□ -1.19
R3HDM1-219ENST00000488035 RPIAP49247 311 aa7.58□□□□□ -1.2
R3HDM1-219ENST00000488035 RBM46Q8TBY0 533 aaKnown RBP7.58□□□□□ -1.2
R3HDM1-219ENST00000488035 SLC6A16Q9GZN6 736 aa7.58□□□□□ -1.2
R3HDM1-219ENST00000488035 C11orf95C9JLR9 678 aaPredicted RBP7.57□□□□□ -1.2
R3HDM1-219ENST00000488035 NR1I2O75469 434 aa7.57□□□□□ -1.2
R3HDM1-219ENST00000488035 AXIN1O15169 862 aa7.56□□□□□ -1.2
R3HDM1-219ENST00000488035 CFHP08603 1231 aa7.53□□□□□ -1.2
R3HDM1-219ENST00000488035 CFAP44Q96MT7 982 aa7.53□□□□□ -1.2
R3HDM1-219ENST00000488035 SLC10A3P09131 477 aa7.52□□□□□ -1.21
R3HDM1-219ENST00000488035 FOXC1Q12948 553 aa7.52□□□□□ -1.21
R3HDM1-219ENST00000488035 PTGDRQ13258 359 aa7.52□□□□□ -1.21
R3HDM1-219ENST00000488035 PAXIP1Q6ZW49 1069 aaPredicted RBP7.52□□□□□ -1.21
R3HDM1-219ENST00000488035 SCUBE3Q8IX30 993 aa7.52□□□□□ -1.21
R3HDM1-219ENST00000488035 ADGRG1Q9Y653 693 aa7.52□□□□□ -1.21
R3HDM1-219ENST00000488035 TERTO14746 1132 aaKnown RBP7.51□□□□□ -1.21
R3HDM1-219ENST00000488035 RSPH4AQ5TD94 716 aa7.51□□□□□ -1.21
R3HDM1-219ENST00000488035 ARHGEF1Q92888 912 aaKnown RBP7.51□□□□□ -1.21
R3HDM1-219ENST00000488035 RCCD1A6NED2 376 aa7.5□□□□□ -1.21
R3HDM1-219ENST00000488035 CYP4X1Q8N118 509 aa7.5□□□□□ -1.21
R3HDM1-219ENST00000488035 CD2BP2O95400 341 aaKnown RBP7.49□□□□□ -1.21
R3HDM1-219ENST00000488035 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.48□□□□□ -1.21
R3HDM1-219ENST00000488035 MLLT3P42568 568 aaPredicted RBP7.48□□□□□ -1.21
R3HDM1-219ENST00000488035 TRIM47Q96LD4 638 aa7.48□□□□□ -1.21
R3HDM1-219ENST00000488035 SPSB2Q99619 263 aa7.48□□□□□ -1.21
R3HDM1-219ENST00000488035 LORP23490 312 aaPredicted RBP7.47□□□□□ -1.21
R3HDM1-219ENST00000488035 ATP13A2Q9NQ11 1180 aa7.47□□□□□ -1.21
R3HDM1-219ENST00000488035 NUTM2FA1L443 756 aa7.46□□□□□ -1.22
R3HDM1-219ENST00000488035 SNRPBP14678 240 aaKnown RBP7.46□□□□□ -1.22
R3HDM1-219ENST00000488035 THAP11Q96EK4 314 aa7.46□□□□□ -1.22
R3HDM1-219ENST00000488035 SENP2Q9HC62 589 aa7.46□□□□□ -1.22
R3HDM1-219ENST00000488035 FAM181BA6NEQ2 426 aa7.45□□□□□ -1.22
R3HDM1-219ENST00000488035 OATP04181 439 aa7.45□□□□□ -1.22
R3HDM1-219ENST00000488035 FCHSD2O94868 740 aa7.44□□□□□ -1.22
R3HDM1-219ENST00000488035 SMPD1P17405 629 aa7.44□□□□□ -1.22
R3HDM1-219ENST00000488035 FCF1Q9Y324 198 aaKnown RBP7.44□□□□□ -1.22
R3HDM1-219ENST00000488035 WNT7AO00755 349 aa7.43□□□□□ -1.22
R3HDM1-219ENST00000488035 SLC24A1O60721 1099 aa7.43□□□□□ -1.22
R3HDM1-219ENST00000488035 KIFC2Q96AC6 838 aa7.43□□□□□ -1.22
R3HDM1-219ENST00000488035 SALL2Q9Y467 1007 aaPredicted RBP7.43□□□□□ -1.22
R3HDM1-219ENST00000488035 SNIP1Q8TAD8 396 aaKnown RBP7.42□□□□□ -1.22
R3HDM1-219ENST00000488035 FAM161AQ3B820 660 aa7.41□□□□□ -1.22
R3HDM1-219ENST00000488035 MORN1Q5T089 497 aa7.41□□□□□ -1.22
R3HDM1-219ENST00000488035 FAM160A2Q8N612 972 aaPredicted RBP7.41□□□□□ -1.22
R3HDM1-219ENST00000488035 TTC24A2A3L6 582 aaPredicted RBP7.4□□□□□ -1.22
R3HDM1-219ENST00000488035 PUS10Q3MIT2 529 aaKnown RBP7.4□□□□□ -1.22
R3HDM1-219ENST00000488035 NPAS3Q8IXF0 933 aa7.4□□□□□ -1.22
R3HDM1-219ENST00000488035 PXYLP1Q8TE99 480 aa7.4□□□□□ -1.22
R3HDM1-219ENST00000488035 KCNV2Q8TDN2 545 aa7.39□□□□□ -1.23
R3HDM1-219ENST00000488035 FMNL1O95466 1100 aaPredicted RBP7.37□□□□□ -1.23
R3HDM1-219ENST00000488035 MSS51Q4VC12 460 aa7.37□□□□□ -1.23
R3HDM1-219ENST00000488035 ZSCAN1Q8NBB4 408 aa7.37□□□□□ -1.23
R3HDM1-219ENST00000488035 ZBTB24O43167 697 aaPredicted RBP7.36□□□□□ -1.23
R3HDM1-219ENST00000488035 METTL3Q86U44 580 aaKnown RBP7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms