RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 RNF223E7ERA6 249 aa9.9□□□□□ -0.82
HMGB1P36-201ENST00000487709 PTGDRQ13258 359 aa9.9□□□□□ -0.82
HMGB1P36-201ENST00000487709 FAM161AQ3B820 660 aa9.9□□□□□ -0.82
HMGB1P36-201ENST00000487709 ARHGEF1Q92888 912 aaKnown RBP9.9□□□□□ -0.82
HMGB1P36-201ENST00000487709 ZNF787Q6DD87 383 aa9.89□□□□□ -0.83
HMGB1P36-201ENST00000487709 RBM46Q8TBY0 533 aaKnown RBP9.89□□□□□ -0.83
HMGB1P36-201ENST00000487709 ADGRG1Q9Y653 693 aa9.89□□□□□ -0.83
HMGB1P36-201ENST00000487709 NUTM2FA1L443 756 aa9.88□□□□□ -0.83
HMGB1P36-201ENST00000487709 SLC19A1P41440 591 aa9.88□□□□□ -0.83
HMGB1P36-201ENST00000487709 TMEM134Q9H6X4 195 aa9.88□□□□□ -0.83
HMGB1P36-201ENST00000487709 TSHZ2Q9NRE2 1034 aa9.88□□□□□ -0.83
HMGB1P36-201ENST00000487709 CFHP08603 1231 aa9.87□□□□□ -0.83
HMGB1P36-201ENST00000487709 RCCD1A6NED2 376 aa9.86□□□□□ -0.83
HMGB1P36-201ENST00000487709 PPEF1O14829 653 aaPredicted RBP9.86□□□□□ -0.83
HMGB1P36-201ENST00000487709 KMT5BQ4FZB7 885 aa9.86□□□□□ -0.83
HMGB1P36-201ENST00000487709 EMID1Q96A84 441 aaPredicted RBP9.86□□□□□ -0.83
HMGB1P36-201ENST00000487709 S1PR4O95977 384 aa9.85□□□□□ -0.83
HMGB1P36-201ENST00000487709 TRIM67Q6ZTA4 783 aa9.85□□□□□ -0.83
HMGB1P36-201ENST00000487709 ACTN4O43707 911 aaKnown RBP9.84□□□□□ -0.83
HMGB1P36-201ENST00000487709 PKDCCQ504Y2 493 aa9.82□□□□□ -0.84
HMGB1P36-201ENST00000487709 SPRYD7Q5W111 196 aa9.82□□□□□ -0.84
HMGB1P36-201ENST00000487709 ANKLE1Q8NAG6 615 aa9.82□□□□□ -0.84
HMGB1P36-201ENST00000487709 SLC10A3P09131 477 aa9.8□□□□□ -0.84
HMGB1P36-201ENST00000487709 FCHSD2O94868 740 aa9.79□□□□□ -0.84
HMGB1P36-201ENST00000487709 ADH1BP00325 375 aa9.79□□□□□ -0.84
HMGB1P36-201ENST00000487709 ZNF697Q5TEC3 545 aa9.79□□□□□ -0.84
HMGB1P36-201ENST00000487709 LIAT1Q6ZQX7 453 aa9.79□□□□□ -0.84
HMGB1P36-201ENST00000487709 ZNF598Q86UK7 904 aaKnown RBP9.79□□□□□ -0.84
HMGB1P36-201ENST00000487709 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.78□□□□□ -0.84
HMGB1P36-201ENST00000487709 TNFRSF10AO00220 468 aa9.78□□□□□ -0.84
HMGB1P36-201ENST00000487709 NR1I2O75469 434 aa9.78□□□□□ -0.84
HMGB1P36-201ENST00000487709 ZNF775Q96BV0 537 aaPredicted RBP9.78□□□□□ -0.84
HMGB1P36-201ENST00000487709 FAM187AA6NFU0 413 aa9.76□□□□□ -0.85
HMGB1P36-201ENST00000487709 SEMA3EO15041 775 aa9.76□□□□□ -0.85
HMGB1P36-201ENST00000487709 MYT1Q01538 1121 aa9.76□□□□□ -0.85
HMGB1P36-201ENST00000487709 DGAT1O75907 488 aa9.75□□□□□ -0.85
HMGB1P36-201ENST00000487709 PRR20EP86478 221 aa9.75□□□□□ -0.85
HMGB1P36-201ENST00000487709 PRR20CP86479 221 aa9.75□□□□□ -0.85
HMGB1P36-201ENST00000487709 PRR20DP86480 221 aa9.75□□□□□ -0.85
HMGB1P36-201ENST00000487709 PRR20BP86481 221 aa9.75□□□□□ -0.85
HMGB1P36-201ENST00000487709 PRR20AP86496 221 aa9.75□□□□□ -0.85
HMGB1P36-201ENST00000487709 PUS10Q3MIT2 529 aaKnown RBP9.75□□□□□ -0.85
HMGB1P36-201ENST00000487709 PLA2G2CQ5R387 149 aa9.75□□□□□ -0.85
HMGB1P36-201ENST00000487709 SLC6A16Q9GZN6 736 aa9.75□□□□□ -0.85
HMGB1P36-201ENST00000487709 PXYLP1Q8TE99 480 aa9.74□□□□□ -0.85
HMGB1P36-201ENST00000487709 P3H3Q8IVL6 736 aa9.73□□□□□ -0.85
HMGB1P36-201ENST00000487709 POTECB2RU33 542 aa9.72□□□□□ -0.85
HMGB1P36-201ENST00000487709 GDF9O60383 454 aa9.72□□□□□ -0.85
HMGB1P36-201ENST00000487709 OATP04181 439 aa9.72□□□□□ -0.85
HMGB1P36-201ENST00000487709 SCUBE3Q8IX30 993 aa9.72□□□□□ -0.85
HMGB1P36-201ENST00000487709 METTL3Q86U44 580 aaKnown RBP9.7□□□□□ -0.86
HMGB1P36-201ENST00000487709 SPSB2Q99619 263 aa9.7□□□□□ -0.86
HMGB1P36-201ENST00000487709 FOXC1Q12948 553 aa9.69□□□□□ -0.86
HMGB1P36-201ENST00000487709 RSPH4AQ5TD94 716 aa9.69□□□□□ -0.86
HMGB1P36-201ENST00000487709 ST8SIA5O15466 376 aa9.68□□□□□ -0.86
HMGB1P36-201ENST00000487709 HIC1Q14526 733 aa9.68□□□□□ -0.86
HMGB1P36-201ENST00000487709 RBM26Q5T8P6 1007 aaKnown RBP9.68□□□□□ -0.86
HMGB1P36-201ENST00000487709 RDH13Q8NBN7 331 aa9.68□□□□□ -0.86
HMGB1P36-201ENST00000487709 NLRP7Q8WX94 980 aa9.66□□□□□ -0.86
HMGB1P36-201ENST00000487709 FECHP22830 423 aa9.65□□□□□ -0.86
HMGB1P36-201ENST00000487709 DDX11L8A8MPP1 907 aa9.64□□□□□ -0.87
HMGB1P36-201ENST00000487709 AAASQ9NRG9 546 aa9.64□□□□□ -0.87
HMGB1P36-201ENST00000487709 PKD2L1Q9P0L9 805 aa9.64□□□□□ -0.87
HMGB1P36-201ENST00000487709 FCF1Q9Y324 198 aaKnown RBP9.64□□□□□ -0.87
HMGB1P36-201ENST00000487709 FUT2Q10981 343 aa9.63□□□□□ -0.87
HMGB1P36-201ENST00000487709 MORN1Q5T089 497 aa9.63□□□□□ -0.87
HMGB1P36-201ENST00000487709 GNPATO15228 680 aa9.62□□□□□ -0.87
HMGB1P36-201ENST00000487709 DAXXQ9UER7 740 aaPredicted RBP9.62□□□□□ -0.87
HMGB1P36-201ENST00000487709 TESPA1A2RU30 521 aaPredicted RBP9.6□□□□□ -0.87
HMGB1P36-201ENST00000487709 PRDM9Q9NQV7 894 aa9.6□□□□□ -0.87
HMGB1P36-201ENST00000487709 ATP6V1AP38606 617 aa9.59□□□□□ -0.87
HMGB1P36-201ENST00000487709 RPIAP49247 311 aa9.59□□□□□ -0.87
HMGB1P36-201ENST00000487709 LMOD2Q6P5Q4 547 aa9.59□□□□□ -0.87
HMGB1P36-201ENST00000487709 THAP11Q96EK4 314 aa9.59□□□□□ -0.87
HMGB1P36-201ENST00000487709 SLC27A5Q9Y2P5 690 aa9.59□□□□□ -0.87
HMGB1P36-201ENST00000487709 GPR37O15354 613 aa9.58□□□□□ -0.88
HMGB1P36-201ENST00000487709 FMNL1O95466 1100 aaPredicted RBP9.58□□□□□ -0.88
HMGB1P36-201ENST00000487709 SMYD5Q6GMV2 418 aa9.58□□□□□ -0.88
HMGB1P36-201ENST00000487709 FAM160A2Q8N612 972 aaPredicted RBP9.58□□□□□ -0.88
HMGB1P36-201ENST00000487709 CD2BP2O95400 341 aaKnown RBP9.57□□□□□ -0.88
HMGB1P36-201ENST00000487709 CYP4X1Q8N118 509 aa9.57□□□□□ -0.88
HMGB1P36-201ENST00000487709 DACH1Q9UI36 760 aa9.57□□□□□ -0.88
HMGB1P36-201ENST00000487709 PHOX2BQ99453 314 aa9.56□□□□□ -0.88
HMGB1P36-201ENST00000487709 GCGRP47871 477 aa9.55□□□□□ -0.88
HMGB1P36-201ENST00000487709 SULF1Q8IWU6 871 aa9.55□□□□□ -0.88
HMGB1P36-201ENST00000487709 TOR4AQ9NXH8 423 aa9.55□□□□□ -0.88
HMGB1P36-201ENST00000487709 RNF19BQ6ZMZ0 732 aa9.54□□□□□ -0.88
HMGB1P36-201ENST00000487709 TTC24A2A3L6 582 aaPredicted RBP9.52□□□□□ -0.89
HMGB1P36-201ENST00000487709 AXIN1O15169 862 aa9.52□□□□□ -0.89
HMGB1P36-201ENST00000487709 ZBTB24O43167 697 aaPredicted RBP9.52□□□□□ -0.89
HMGB1P36-201ENST00000487709 BRICD5Q6PL45 260 aa9.52□□□□□ -0.89
HMGB1P36-201ENST00000487709 TREML4Q6UXN2 200 aa9.52□□□□□ -0.89
HMGB1P36-201ENST00000487709 CRIPAKQ8N1N5 446 aa9.52□□□□□ -0.89
HMGB1P36-201ENST00000487709 GMPR2Q9P2T1 348 aaKnown RBP9.52□□□□□ -0.89
HMGB1P36-201ENST00000487709 AVPP01185 164 aa9.51□□□□□ -0.89
HMGB1P36-201ENST00000487709 SALL2Q9Y467 1007 aaPredicted RBP9.5□□□□□ -0.89
HMGB1P36-201ENST00000487709 C11orf95C9JLR9 678 aaPredicted RBP9.49□□□□□ -0.89
HMGB1P36-201ENST00000487709 MSS51Q4VC12 460 aa9.49□□□□□ -0.89
HMGB1P36-201ENST00000487709 GPIHBP1Q8IV16 184 aa9.49□□□□□ -0.89
HMGB1P36-201ENST00000487709 GRIPAP1Q4V328 841 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms