RNA–Protein interactions for RNA: ENST00000487401.1

SREBF1-215, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-215ENST00000487401 TET3O43151 1660 aa18.83■□□□□ 0.61
SREBF1-215ENST00000487401 NUTM2DQ5VT03 806 aaPredicted RBP18.83■□□□□ 0.6
SREBF1-215ENST00000487401 RBM33Q96EV2 1170 aaKnown RBP18.83■□□□□ 0.6
SREBF1-215ENST00000487401 UNC13BO14795 1591 aa18.83■□□□□ 0.6
SREBF1-215ENST00000487401 KDM5AP29375 1690 aaKnown RBP18.82■□□□□ 0.6
SREBF1-215ENST00000487401 TBX22Q9Y458 520 aa18.82■□□□□ 0.6
SREBF1-215ENST00000487401 ZFYVE9O95405 1425 aa18.82■□□□□ 0.6
SREBF1-215ENST00000487401 RRBP1Q9P2E9 1410 aaKnown RBP18.82■□□□□ 0.6
SREBF1-215ENST00000487401 SOCS7O14512 581 aa18.8■□□□□ 0.6
SREBF1-215ENST00000487401 STRCP1A6NGW2 1772 aa18.78■□□□□ 0.6
SREBF1-215ENST00000487401 TRIM52Q96A61 297 aa18.78■□□□□ 0.6
SREBF1-215ENST00000487401 ALKQ9UM73 1620 aa18.78■□□□□ 0.6
SREBF1-215ENST00000487401 ZNF326Q5BKZ1 582 aaKnown RBP18.77■□□□□ 0.6
SREBF1-215ENST00000487401 IQGAP3Q86VI3 1631 aa18.76■□□□□ 0.59
SREBF1-215ENST00000487401 PHF23Q9BUL5 403 aaPredicted RBP18.76■□□□□ 0.59
SREBF1-215ENST00000487401 MSH6P52701 1360 aa18.75■□□□□ 0.59
SREBF1-215ENST00000487401 NAIPQ13075 1403 aa18.74■□□□□ 0.59
SREBF1-215ENST00000487401 FAM135BQ49AJ0 1406 aa18.74■□□□□ 0.59
SREBF1-215ENST00000487401 GCC2Q8IWJ2 1684 aa18.74■□□□□ 0.59
SREBF1-215ENST00000487401 C14orf37Q86TY3 774 aa18.74■□□□□ 0.59
SREBF1-215ENST00000487401 TMEM131LA2VDJ0 1609 aa18.74■□□□□ 0.59
SREBF1-215ENST00000487401 NKTRP30414 1462 aaKnown RBP18.73■□□□□ 0.59
SREBF1-215ENST00000487401 SLAIN2Q9P270 581 aa18.72■□□□□ 0.59
SREBF1-215ENST00000487401 E9PCH4 1651 aa18.72■□□□□ 0.59
SREBF1-215ENST00000487401 PIK3R4Q99570 1358 aa18.7■□□□□ 0.58
SREBF1-215ENST00000487401 ADAMTS13Q76LX8 1427 aa18.7■□□□□ 0.58
SREBF1-215ENST00000487401 SLC4A1APQ9BWU0 796 aaKnown RBP18.69■□□□□ 0.58
SREBF1-215ENST00000487401 AMOTL2Q9Y2J4 779 aa18.69■□□□□ 0.58
SREBF1-215ENST00000487401 MED1Q15648 1581 aaPredicted RBP18.68■□□□□ 0.58
SREBF1-215ENST00000487401 HFM1A2PYH4 1435 aa18.67■□□□□ 0.58
SREBF1-215ENST00000487401 NWD1Q149M9 1564 aa18.67■□□□□ 0.58
SREBF1-215ENST00000487401 NCOA3Q9Y6Q9 1424 aa18.66■□□□□ 0.58
SREBF1-215ENST00000487401 ATF3P18847 181 aa18.66■□□□□ 0.58
SREBF1-215ENST00000487401 C19orf44Q9H6X5 657 aa18.66■□□□□ 0.58
SREBF1-215ENST00000487401 CADPS2Q86UW7 1296 aa18.65■□□□□ 0.58
SREBF1-215ENST00000487401 DIP2AQ14689 1571 aa18.61■□□□□ 0.57
SREBF1-215ENST00000487401 VGFO15240 615 aaPredicted RBP18.61■□□□□ 0.57
SREBF1-215ENST00000487401 PTPRUQ92729 1446 aa18.6■□□□□ 0.57
SREBF1-215ENST00000487401 TRPM2O94759 1503 aa18.59■□□□□ 0.57
SREBF1-215ENST00000487401 XIRP1Q702N8 1843 aaKnown RBP18.58■□□□□ 0.57
SREBF1-215ENST00000487401 METP08581 1390 aa18.58■□□□□ 0.57
SREBF1-215ENST00000487401 RPGRIP1LQ68CZ1 1315 aa18.58■□□□□ 0.57
SREBF1-215ENST00000487401 FOXD1Q16676 465 aa18.57■□□□□ 0.56
SREBF1-215ENST00000487401 MYO5BQ9ULV0 1848 aa18.57■□□□□ 0.56
SREBF1-215ENST00000487401 MPHOSPH9Q99550 1183 aa18.55■□□□□ 0.56
SREBF1-215ENST00000487401 SPHKAPQ2M3C7 1700 aa18.54■□□□□ 0.56
SREBF1-215ENST00000487401 SETBP1Q9Y6X0 1596 aa18.54■□□□□ 0.56
SREBF1-215ENST00000487401 JCADQ9P266 1359 aa18.54■□□□□ 0.56
SREBF1-215ENST00000487401 ROBO1Q9Y6N7 1651 aa18.54■□□□□ 0.56
SREBF1-215ENST00000487401 CHD2O14647 1828 aaKnown RBP18.53■□□□□ 0.56
SREBF1-215ENST00000487401 RGS17Q9UGC6 210 aaPredicted RBP18.53■□□□□ 0.56
SREBF1-215ENST00000487401 CLTCL1P53675 1640 aa18.52■□□□□ 0.56
SREBF1-215ENST00000487401 ACIN1Q9UKV3 1341 aaKnown RBP18.52■□□□□ 0.56
SREBF1-215ENST00000487401 BRINP3Q76B58 766 aa18.52■□□□□ 0.56
SREBF1-215ENST00000487401 NEXMIFQ5QGS0 1516 aa18.51■□□□□ 0.55
SREBF1-215ENST00000487401 RGL3Q3MIN7 710 aa18.5■□□□□ 0.55
SREBF1-215ENST00000487401 CCDC144AA2RUR9 1427 aa18.49■□□□□ 0.55
SREBF1-215ENST00000487401 DCCP43146 1447 aa18.49■□□□□ 0.55
SREBF1-215ENST00000487401 MEX3CQ5U5Q3 659 aaKnown RBP18.47■□□□□ 0.55
SREBF1-215ENST00000487401 NRXN3Q9Y4C0 1643 aa18.46■□□□□ 0.55
SREBF1-215ENST00000487401 POTEAQ6S8J7 498 aa18.46■□□□□ 0.55
SREBF1-215ENST00000487401 SPATA31A6Q5VVP1 1343 aa18.46■□□□□ 0.55
SREBF1-215ENST00000487401 SETD5Q9C0A6 1442 aa18.45■□□□□ 0.54
SREBF1-215ENST00000487401 ADGRL3Q9HAR2 1447 aa18.44■□□□□ 0.54
SREBF1-215ENST00000487401 ADGRF5Q8IZF2 1346 aa18.44■□□□□ 0.54
SREBF1-215ENST00000487401 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.43■□□□□ 0.54
SREBF1-215ENST00000487401 ROBO2Q9HCK4 1378 aa18.42■□□□□ 0.54
SREBF1-215ENST00000487401 MST1RQ04912 1400 aa18.42■□□□□ 0.54
SREBF1-215ENST00000487401 ANKRD30BQ9BXX2 1392 aa18.42■□□□□ 0.54
SREBF1-215ENST00000487401 PTCH1Q13635 1447 aa18.41■□□□□ 0.54
SREBF1-215ENST00000487401 XRN1Q8IZH2 1706 aaKnown RBP18.41■□□□□ 0.54
SREBF1-215ENST00000487401 NUTM2BA6NNL0 878 aaPredicted RBP18.41■□□□□ 0.54
SREBF1-215ENST00000487401 NUTM2EB1AL46 878 aaPredicted RBP18.41■□□□□ 0.54
SREBF1-215ENST00000487401 NUTM2AQ8IVF1 878 aaPredicted RBP18.41■□□□□ 0.54
SREBF1-215ENST00000487401 LRRC59Q96AG4 307 aaKnown RBP18.41■□□□□ 0.54
SREBF1-215ENST00000487401 STK26Q9P289 416 aa18.41■□□□□ 0.54
SREBF1-215ENST00000487401 PHLPP1O60346 1717 aa18.4■□□□□ 0.54
SREBF1-215ENST00000487401 DDX17Q92841 729 aaKnown RBP18.39■□□□□ 0.53
SREBF1-215ENST00000487401 SPATA31E1Q6ZUB1 1445 aa18.39■□□□□ 0.53
SREBF1-215ENST00000487401 AHDC1Q5TGY3 1603 aaPredicted RBP18.38■□□□□ 0.53
SREBF1-215ENST00000487401 KIF1BO60333 1816 aa18.38■□□□□ 0.53
SREBF1-215ENST00000487401 ASXL1Q8IXJ9 1541 aa18.38■□□□□ 0.53
SREBF1-215ENST00000487401 COL16A1Q07092 1604 aaPredicted RBP18.38■□□□□ 0.53
SREBF1-215ENST00000487401 ZNF772Q68DY9 489 aaPredicted RBP18.37■□□□□ 0.53
SREBF1-215ENST00000487401 C1orf167Q5SNV9 1468 aa18.36■□□□□ 0.53
SREBF1-215ENST00000487401 TMEM132EQ6IEE7 984 aa18.36■□□□□ 0.53
SREBF1-215ENST00000487401 ORAI2Q96SN7 254 aa18.36■□□□□ 0.53
SREBF1-215ENST00000487401 RAB3GAP2Q9H2M9 1393 aa18.36■□□□□ 0.53
SREBF1-215ENST00000487401 PRAG1Q86YV5 1406 aa18.34■□□□□ 0.53
SREBF1-215ENST00000487401 WAPLQ7Z5K2 1190 aa18.34■□□□□ 0.53
SREBF1-215ENST00000487401 LRPPRCP42704 1394 aaKnown RBP18.33■□□□□ 0.53
SREBF1-215ENST00000487401 LRP6O75581 1613 aa18.33■□□□□ 0.52
SREBF1-215ENST00000487401 ESCO1Q5FWF5 840 aa18.32■□□□□ 0.52
SREBF1-215ENST00000487401 ABCC11Q96J66 1382 aa18.31■□□□□ 0.52
SREBF1-215ENST00000487401 C14orf93Q9H972 538 aaKnown RBP18.31■□□□□ 0.52
SREBF1-215ENST00000487401 CFAP70Q5T0N1 1121 aa18.29■□□□□ 0.52
SREBF1-215ENST00000487401 PIK3C2GO75747 1445 aa18.29■□□□□ 0.52
SREBF1-215ENST00000487401 PNPLA6Q8IY17 1366 aa18.29■□□□□ 0.52
SREBF1-215ENST00000487401 SOS2Q07890 1332 aaPredicted RBP18.28■□□□□ 0.52
SREBF1-215ENST00000487401 NUTM2FA1L443 756 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms