RNA–Protein interactions for RNA: ENST00000487079.1

POLR2D-204, Transcript of RNA polymerase II subunit D, humanhuman

TSL 2

Gene POLR2D, Length 1,037 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2D-204ENST00000487079 SENP3Q9H4L4 574 aaPredicted RBP37.69■■■■□ 3.62
POLR2D-204ENST00000487079 TMEM131LA2VDJ0 1609 aa37.69■■■■□ 3.62
POLR2D-204ENST00000487079 RRBP1Q9P2E9 1410 aaKnown RBP37.68■■■■□ 3.62
POLR2D-204ENST00000487079 KCNA6P17658 529 aa37.67■■■■□ 3.62
POLR2D-204ENST00000487079 ZFYVE9O95405 1425 aa37.67■■■■□ 3.62
POLR2D-204ENST00000487079 RIMS2Q9UQ26 1411 aa37.66■■■■□ 3.62
POLR2D-204ENST00000487079 HDGFP51858 240 aaKnown RBP37.65■■■■□ 3.62
POLR2D-204ENST00000487079 XIRP1Q702N8 1843 aaKnown RBP37.64■■■■□ 3.62
POLR2D-204ENST00000487079 PPP1R15AO75807 674 aaPredicted RBP37.64■■■■□ 3.62
POLR2D-204ENST00000487079 PLEKHG1Q9ULL1 1385 aa37.6■■■■□ 3.61
POLR2D-204ENST00000487079 TMEM94Q12767 1356 aa37.59■■■■□ 3.61
POLR2D-204ENST00000487079 PROSER2Q86WR7 435 aaPredicted RBP37.58■■■■□ 3.61
POLR2D-204ENST00000487079 ABCF1Q8NE71 845 aaKnown RBP eCLIP37.56■■■■□ 3.6
POLR2D-204ENST00000487079 NUTM2DQ5VT03 806 aaPredicted RBP37.55■■■■□ 3.6
POLR2D-204ENST00000487079 RBM33Q96EV2 1170 aaKnown RBP37.55■■■■□ 3.6
POLR2D-204ENST00000487079 NWD1Q149M9 1564 aa37.51■■■■□ 3.59
POLR2D-204ENST00000487079 NAIPQ13075 1403 aa37.5■■■■□ 3.59
POLR2D-204ENST00000487079 NKTRP30414 1462 aaKnown RBP37.49■■■■□ 3.59
POLR2D-204ENST00000487079 TBX22Q9Y458 520 aa37.47■■■■□ 3.59
POLR2D-204ENST00000487079 MED1Q15648 1581 aaPredicted RBP37.45■■■■□ 3.59
POLR2D-204ENST00000487079 SPHKAPQ2M3C7 1700 aa37.44■■■■□ 3.58
POLR2D-204ENST00000487079 CHD2O14647 1828 aaKnown RBP37.43■■■■□ 3.58
POLR2D-204ENST00000487079 ADAMTS13Q76LX8 1427 aa37.41■■■■□ 3.58
POLR2D-204ENST00000487079 SOCS7O14512 581 aa37.39■■■■□ 3.58
POLR2D-204ENST00000487079 FAM135BQ49AJ0 1406 aa37.38■■■■□ 3.57
POLR2D-204ENST00000487079 TRIM52Q96A61 297 aa37.36■■■■□ 3.57
POLR2D-204ENST00000487079 MSH6P52701 1360 aa37.36■■■■□ 3.57
POLR2D-204ENST00000487079 HFM1A2PYH4 1435 aa37.36■■■■□ 3.57
POLR2D-204ENST00000487079 ZNF326Q5BKZ1 582 aaKnown RBP37.35■■■■□ 3.57
POLR2D-204ENST00000487079 DIP2AQ14689 1571 aa37.34■■■■□ 3.57
POLR2D-204ENST00000487079 PIK3R4Q99570 1358 aa37.3■■■■□ 3.56
POLR2D-204ENST00000487079 CLTCL1P53675 1640 aa37.28■■■■□ 3.56
POLR2D-204ENST00000487079 TRPM2O94759 1503 aa37.28■■■■□ 3.56
POLR2D-204ENST00000487079 ROBO1Q9Y6N7 1651 aa37.28■■■■□ 3.56
POLR2D-204ENST00000487079 PHF23Q9BUL5 403 aaPredicted RBP37.26■■■■□ 3.56
POLR2D-204ENST00000487079 C14orf37Q86TY3 774 aa37.25■■■■□ 3.55
POLR2D-204ENST00000487079 SLAIN2Q9P270 581 aa37.25■■■■□ 3.55
POLR2D-204ENST00000487079 AMOTL2Q9Y2J4 779 aa37.24■■■■□ 3.55
POLR2D-204ENST00000487079 SLC4A1APQ9BWU0 796 aaKnown RBP37.23■■■■□ 3.55
POLR2D-204ENST00000487079 NCOA3Q9Y6Q9 1424 aa37.23■■■■□ 3.55
POLR2D-204ENST00000487079 PTPRUQ92729 1446 aa37.22■■■■□ 3.55
POLR2D-204ENST00000487079 NRXN3Q9Y4C0 1643 aa37.2■■■■□ 3.55
POLR2D-204ENST00000487079 SETBP1Q9Y6X0 1596 aa37.19■■■■□ 3.54
POLR2D-204ENST00000487079 KIF1BO60333 1816 aa37.18■■■■□ 3.54
POLR2D-204ENST00000487079 NEXMIFQ5QGS0 1516 aa37.16■■■■□ 3.54
POLR2D-204ENST00000487079 C19orf44Q9H6X5 657 aa37.14■■■■□ 3.54
POLR2D-204ENST00000487079 ATF3P18847 181 aa37.11■■■■□ 3.53
POLR2D-204ENST00000487079 METP08581 1390 aa37.11■■■■□ 3.53
POLR2D-204ENST00000487079 SIPA1L2Q9P2F8 1722 aaPredicted RBP37.1■■■■□ 3.53
POLR2D-204ENST00000487079 CADPS2Q86UW7 1296 aa37.1■■■■□ 3.53
POLR2D-204ENST00000487079 FOXD1Q16676 465 aa37.07■■■■□ 3.52
POLR2D-204ENST00000487079 XRN1Q8IZH2 1706 aaKnown RBP37.07■■■■□ 3.52
POLR2D-204ENST00000487079 PHLPP1O60346 1717 aa37.05■■■■□ 3.52
POLR2D-204ENST00000487079 VGFO15240 615 aaPredicted RBP37.03■■■■□ 3.52
POLR2D-204ENST00000487079 RPGRIP1LQ68CZ1 1315 aa37■■■■□ 3.51
POLR2D-204ENST00000487079 RGS17Q9UGC6 210 aaPredicted RBP36.98■■■■□ 3.51
POLR2D-204ENST00000487079 MPHOSPH9Q99550 1183 aa36.97■■■■□ 3.51
POLR2D-204ENST00000487079 DCCP43146 1447 aa36.94■■■■□ 3.5
POLR2D-204ENST00000487079 JCADQ9P266 1359 aa36.94■■■■□ 3.5
POLR2D-204ENST00000487079 COL16A1Q07092 1604 aaPredicted RBP36.93■■■■□ 3.5
POLR2D-204ENST00000487079 CCDC144AA2RUR9 1427 aa36.91■■■■□ 3.5
POLR2D-204ENST00000487079 BRINP3Q76B58 766 aa36.9■■■■□ 3.5
POLR2D-204ENST00000487079 PPLO60437 1756 aa36.9■■■■□ 3.5
POLR2D-204ENST00000487079 AHDC1Q5TGY3 1603 aaPredicted RBP36.88■■■■□ 3.49
POLR2D-204ENST00000487079 SETD1AO15047 1707 aaKnown RBP36.87■■■■□ 3.49
POLR2D-204ENST00000487079 ADGRL3Q9HAR2 1447 aa36.86■■■■□ 3.49
POLR2D-204ENST00000487079 MST1RQ04912 1400 aa36.85■■■■□ 3.49
POLR2D-204ENST00000487079 RGL3Q3MIN7 710 aa36.85■■■■□ 3.49
POLR2D-204ENST00000487079 SETD5Q9C0A6 1442 aa36.84■■■■□ 3.49
POLR2D-204ENST00000487079 ROBO2Q9HCK4 1378 aa36.81■■■■□ 3.48
POLR2D-204ENST00000487079 PTCH1Q13635 1447 aa36.81■■■■□ 3.48
POLR2D-204ENST00000487079 NALCNQ8IZF0 1738 aa36.81■■■■□ 3.48
POLR2D-204ENST00000487079 ASXL1Q8IXJ9 1541 aa36.8■■■■□ 3.48
POLR2D-204ENST00000487079 SPATA31E1Q6ZUB1 1445 aa36.79■■■■□ 3.48
POLR2D-204ENST00000487079 POTEAQ6S8J7 498 aa36.79■■■■□ 3.48
POLR2D-204ENST00000487079 ADGRF5Q8IZF2 1346 aa36.79■■■■□ 3.48
POLR2D-204ENST00000487079 ACIN1Q9UKV3 1341 aaKnown RBP36.79■■■■□ 3.48
POLR2D-204ENST00000487079 SPATA31A6Q5VVP1 1343 aa36.76■■■■□ 3.47
POLR2D-204ENST00000487079 PRAG1Q86YV5 1406 aa36.72■■■■□ 3.47
POLR2D-204ENST00000487079 ANKRD30BQ9BXX2 1392 aa36.72■■■■□ 3.47
POLR2D-204ENST00000487079 SHPRHQ149N8 1683 aa36.71■■■■□ 3.47
POLR2D-204ENST00000487079 LRP6O75581 1613 aa36.71■■■■□ 3.47
POLR2D-204ENST00000487079 RAB3GAP2Q9H2M9 1393 aa36.7■■■■□ 3.47
POLR2D-204ENST00000487079 MEX3CQ5U5Q3 659 aaKnown RBP36.69■■■■□ 3.46
POLR2D-204ENST00000487079 IFT172Q9UG01 1749 aa36.68■■■■□ 3.46
POLR2D-204ENST00000487079 NHSL1Q5SYE7 1610 aa36.68■■■■□ 3.46
POLR2D-204ENST00000487079 DDX17Q92841 729 aaKnown RBP36.68■■■■□ 3.46
POLR2D-204ENST00000487079 C1orf167Q5SNV9 1468 aa36.68■■■■□ 3.46
POLR2D-204ENST00000487079 STK26Q9P289 416 aa36.64■■■■□ 3.46
POLR2D-204ENST00000487079 NUTM2BA6NNL0 878 aaPredicted RBP36.63■■■■□ 3.45
POLR2D-204ENST00000487079 NUTM2EB1AL46 878 aaPredicted RBP36.63■■■■□ 3.45
POLR2D-204ENST00000487079 NUTM2AQ8IVF1 878 aaPredicted RBP36.63■■■■□ 3.45
POLR2D-204ENST00000487079 LRRC59Q96AG4 307 aaKnown RBP36.63■■■■□ 3.45
POLR2D-204ENST00000487079 TMEM132EQ6IEE7 984 aa36.6■■■■□ 3.45
POLR2D-204ENST00000487079 ORAI2Q96SN7 254 aa36.6■■■■□ 3.45
POLR2D-204ENST00000487079 PIK3C2GO75747 1445 aa36.59■■■■□ 3.45
POLR2D-204ENST00000487079 LRPPRCP42704 1394 aaKnown RBP36.57■■■■□ 3.45
POLR2D-204ENST00000487079 WAPLQ7Z5K2 1190 aa36.56■■■■□ 3.44
POLR2D-204ENST00000487079 TECPR2O15040 1411 aa36.54■■■■□ 3.44
POLR2D-204ENST00000487079 ZNF772Q68DY9 489 aaPredicted RBP36.53■■■■□ 3.44
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms