RNA–Protein interactions for RNA: ENST00000486793.5

GMDS-205, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 3

Gene GMDS, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-205ENST00000486793 PPP1R15AO75807 674 aaPredicted RBP28.89■■■□□ 2.22
GMDS-205ENST00000486793 CHGAP10645 457 aaKnown RBP28.88■■■□□ 2.21
GMDS-205ENST00000486793 RGS17Q9UGC6 210 aaPredicted RBP28.86■■■□□ 2.21
GMDS-205ENST00000486793 ZFYVE9O95405 1425 aa28.86■■■□□ 2.21
GMDS-205ENST00000486793 RIMS2Q9UQ26 1411 aa28.86■■■□□ 2.21
GMDS-205ENST00000486793 XIRP1Q702N8 1843 aaKnown RBP28.85■■■□□ 2.21
GMDS-205ENST00000486793 PLEKHG1Q9ULL1 1385 aa28.85■■■□□ 2.21
GMDS-205ENST00000486793 TBX22Q9Y458 520 aa28.83■■■□□ 2.21
GMDS-205ENST00000486793 ITGAEP38570 1179 aa28.82■■■□□ 2.2
GMDS-205ENST00000486793 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.82■■■□□ 2.2
GMDS-205ENST00000486793 SLAIN2Q9P270 581 aa28.82■■■□□ 2.2
GMDS-205ENST00000486793 ROCK1Q13464 1354 aa28.82■■■□□ 2.2
GMDS-205ENST00000486793 NUTM2DQ5VT03 806 aaPredicted RBP28.81■■■□□ 2.2
GMDS-205ENST00000486793 NKTRP30414 1462 aaKnown RBP28.8■■■□□ 2.2
GMDS-205ENST00000486793 MSH6P52701 1360 aa28.8■■■□□ 2.2
GMDS-205ENST00000486793 PPARGC1BQ86YN6 1023 aaKnown RBP28.78■■■□□ 2.2
GMDS-205ENST00000486793 NUP155O75694 1391 aa28.77■■■□□ 2.2
GMDS-205ENST00000486793 NWD1Q149M9 1564 aa28.75■■■□□ 2.19
GMDS-205ENST00000486793 TMEM131LA2VDJ0 1609 aa28.73■■■□□ 2.19
GMDS-205ENST00000486793 UNC13BO14795 1591 aa28.72■■■□□ 2.19
GMDS-205ENST00000486793 C14orf37Q86TY3 774 aa28.7■■■□□ 2.18
GMDS-205ENST00000486793 ADAMTS13Q76LX8 1427 aa28.69■■■□□ 2.18
GMDS-205ENST00000486793 POTEAQ6S8J7 498 aa28.69■■■□□ 2.18
GMDS-205ENST00000486793 ROBO1Q9Y6N7 1651 aa28.69■■■□□ 2.18
GMDS-205ENST00000486793 NCOA3Q9Y6Q9 1424 aa28.66■■■□□ 2.18
GMDS-205ENST00000486793 GCC2Q8IWJ2 1684 aa28.65■■■□□ 2.18
GMDS-205ENST00000486793 C19orf44Q9H6X5 657 aa28.65■■■□□ 2.18
GMDS-205ENST00000486793 E9PCH4 1651 aa28.64■■■□□ 2.18
GMDS-205ENST00000486793 AMOTL2Q9Y2J4 779 aa28.64■■■□□ 2.18
GMDS-205ENST00000486793 PIK3R4Q99570 1358 aa28.63■■■□□ 2.17
GMDS-205ENST00000486793 CADPS2Q86UW7 1296 aa28.62■■■□□ 2.17
GMDS-205ENST00000486793 IQGAP3Q86VI3 1631 aa28.61■■■□□ 2.17
GMDS-205ENST00000486793 ATF3P18847 181 aa28.61■■■□□ 2.17
GMDS-205ENST00000486793 MYO5BQ9ULV0 1848 aa28.61■■■□□ 2.17
GMDS-205ENST00000486793 JCADQ9P266 1359 aa28.61■■■□□ 2.17
GMDS-205ENST00000486793 CHD2O14647 1828 aaKnown RBP28.6■■■□□ 2.17
GMDS-205ENST00000486793 ZNF326Q5BKZ1 582 aaKnown RBP28.57■■■□□ 2.16
GMDS-205ENST00000486793 PTPRUQ92729 1446 aa28.56■■■□□ 2.16
GMDS-205ENST00000486793 DIP2AQ14689 1571 aa28.53■■■□□ 2.16
GMDS-205ENST00000486793 BRINP3Q76B58 766 aa28.49■■■□□ 2.15
GMDS-205ENST00000486793 PHLPP1O60346 1717 aa28.49■■■□□ 2.15
GMDS-205ENST00000486793 TRPM2O94759 1503 aa28.48■■■□□ 2.15
GMDS-205ENST00000486793 SPATA31A6Q5VVP1 1343 aa28.47■■■□□ 2.15
GMDS-205ENST00000486793 METP08581 1390 aa28.47■■■□□ 2.15
GMDS-205ENST00000486793 MEX3CQ5U5Q3 659 aaKnown RBP28.44■■■□□ 2.14
GMDS-205ENST00000486793 COL16A1Q07092 1604 aaPredicted RBP28.43■■■□□ 2.14
GMDS-205ENST00000486793 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.43■■■□□ 2.14
GMDS-205ENST00000486793 NAIPQ13075 1403 aa28.4■■■□□ 2.14
GMDS-205ENST00000486793 RRBP1Q9P2E9 1410 aaKnown RBP28.4■■■□□ 2.14
GMDS-205ENST00000486793 SETBP1Q9Y6X0 1596 aa28.4■■■□□ 2.14
GMDS-205ENST00000486793 LRP6O75581 1613 aa28.4■■■□□ 2.14
GMDS-205ENST00000486793 DCCP43146 1447 aa28.38■■■□□ 2.13
GMDS-205ENST00000486793 ZNF772Q68DY9 489 aaPredicted RBP28.38■■■□□ 2.13
GMDS-205ENST00000486793 TRIM52Q96A61 297 aa28.38■■■□□ 2.13
GMDS-205ENST00000486793 AHDC1Q5TGY3 1603 aaPredicted RBP28.37■■■□□ 2.13
GMDS-205ENST00000486793 NRXN3Q9Y4C0 1643 aa28.36■■■□□ 2.13
GMDS-205ENST00000486793 NUTM2BA6NNL0 878 aaPredicted RBP28.36■■■□□ 2.13
GMDS-205ENST00000486793 NUTM2EB1AL46 878 aaPredicted RBP28.36■■■□□ 2.13
GMDS-205ENST00000486793 NUTM2AQ8IVF1 878 aaPredicted RBP28.36■■■□□ 2.13
GMDS-205ENST00000486793 SPHKAPQ2M3C7 1700 aa28.34■■■□□ 2.13
GMDS-205ENST00000486793 MST1RQ04912 1400 aa28.34■■■□□ 2.13
GMDS-205ENST00000486793 VGFO15240 615 aaPredicted RBP28.32■■■□□ 2.12
GMDS-205ENST00000486793 DDX17Q92841 729 aaKnown RBP28.31■■■□□ 2.12
GMDS-205ENST00000486793 LRRC59Q96AG4 307 aaKnown RBP28.31■■■□□ 2.12
GMDS-205ENST00000486793 XRN1Q8IZH2 1706 aaKnown RBP28.31■■■□□ 2.12
GMDS-205ENST00000486793 CLTCL1P53675 1640 aa28.3■■■□□ 2.12
GMDS-205ENST00000486793 NEXMIFQ5QGS0 1516 aa28.3■■■□□ 2.12
GMDS-205ENST00000486793 SLC4A1APQ9BWU0 796 aaKnown RBP28.3■■■□□ 2.12
GMDS-205ENST00000486793 ASXL1Q8IXJ9 1541 aa28.28■■■□□ 2.12
GMDS-205ENST00000486793 SETD5Q9C0A6 1442 aa28.28■■■□□ 2.12
GMDS-205ENST00000486793 ADGRL3Q9HAR2 1447 aa28.28■■■□□ 2.12
GMDS-205ENST00000486793 RXRBP28702 533 aa28.26■■■□□ 2.11
GMDS-205ENST00000486793 RPGRIP1LQ68CZ1 1315 aa28.25■■■□□ 2.11
GMDS-205ENST00000486793 HFM1A2PYH4 1435 aa28.24■■■□□ 2.11
GMDS-205ENST00000486793 ROBO2Q9HCK4 1378 aa28.23■■■□□ 2.11
GMDS-205ENST00000486793 SHPRHQ149N8 1683 aa28.23■■■□□ 2.11
GMDS-205ENST00000486793 AFF2P51816 1311 aa28.21■■■□□ 2.11
GMDS-205ENST00000486793 FOXD1Q16676 465 aa28.2■■■□□ 2.1
GMDS-205ENST00000486793 UPF1Q92900 1129 aaKnown RBP eCLIP28.19■■■□□ 2.13e-10■■■■■ 36
GMDS-205ENST00000486793 ORAI2Q96SN7 254 aa28.19■■■□□ 2.1
GMDS-205ENST00000486793 C1orf167Q5SNV9 1468 aa28.19■■■□□ 2.1
GMDS-205ENST00000486793 PNPLA6Q8IY17 1366 aa28.17■■■□□ 2.1
GMDS-205ENST00000486793 C8orf37Q96NL8 207 aa28.17■■■□□ 2.1
GMDS-205ENST00000486793 PTCH1Q13635 1447 aa28.17■■■□□ 2.1
GMDS-205ENST00000486793 SETD1AO15047 1707 aaKnown RBP28.16■■■□□ 2.1
GMDS-205ENST00000486793 QTRT2Q9H974 415 aaKnown RBP28.14■■■□□ 2.1
GMDS-205ENST00000486793 ADAMTS2O95450 1211 aa28.12■■■□□ 2.09
GMDS-205ENST00000486793 KIF1BO60333 1816 aa28.11■■■□□ 2.09
GMDS-205ENST00000486793 NHSL1Q5SYE7 1610 aa28.11■■■□□ 2.09
GMDS-205ENST00000486793 RGL3Q3MIN7 710 aa28.11■■■□□ 2.09
GMDS-205ENST00000486793 SOS2Q07890 1332 aaPredicted RBP28.11■■■□□ 2.09
GMDS-205ENST00000486793 NGLY1Q96IV0 654 aa28.1■■■□□ 2.09
GMDS-205ENST00000486793 ADGRF5Q8IZF2 1346 aa28.1■■■□□ 2.09
GMDS-205ENST00000486793 NALCNQ8IZF0 1738 aa28.09■■■□□ 2.09
GMDS-205ENST00000486793 PRAG1Q86YV5 1406 aa28.08■■■□□ 2.09
GMDS-205ENST00000486793 RBM6P78332 1123 aaKnown RBP28.07■■■□□ 2.08
GMDS-205ENST00000486793 MPHOSPH9Q99550 1183 aa28.07■■■□□ 2.08
GMDS-205ENST00000486793 STK26Q9P289 416 aa28.06■■■□□ 2.08
GMDS-205ENST00000486793 CDK12Q9NYV4 1490 aaPredicted RBP28.06■■■□□ 2.08
GMDS-205ENST00000486793 ESCO1Q5FWF5 840 aa28.05■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms