RNA–Protein interactions for RNA: ENST00000486066.5

CHRD-216, Transcript of chordin, humanhuman

TSL 4

Gene CHRD, Length 546 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-216ENST00000486066 PROSER2Q86WR7 435 aaPredicted RBP30.36■■■□□ 2.45
CHRD-216ENST00000486066 RBM33Q96EV2 1170 aaKnown RBP30.36■■■□□ 2.45
CHRD-216ENST00000486066 SLC52A1Q9NWF4 448 aa30.35■■■□□ 2.45
CHRD-216ENST00000486066 PHLPP1O60346 1717 aa30.33■■■□□ 2.45
CHRD-216ENST00000486066 TMEM131LA2VDJ0 1609 aa30.32■■■□□ 2.44
CHRD-216ENST00000486066 PLEKHG1Q9ULL1 1385 aa30.31■■■□□ 2.44
CHRD-216ENST00000486066 GCC2Q8IWJ2 1684 aa30.31■■■□□ 2.44
CHRD-216ENST00000486066 CHIC2Q9UKJ5 165 aa30.31■■■□□ 2.44
CHRD-216ENST00000486066 COL16A1Q07092 1604 aaPredicted RBP30.31■■■□□ 2.44
CHRD-216ENST00000486066 MSH6P52701 1360 aa30.29■■■□□ 2.44
CHRD-216ENST00000486066 SETD1AO15047 1707 aaKnown RBP30.28■■■□□ 2.44
CHRD-216ENST00000486066 SLAIN2Q9P270 581 aa30.27■■■□□ 2.44
CHRD-216ENST00000486066 NCOA3Q9Y6Q9 1424 aa30.25■■■□□ 2.43
CHRD-216ENST00000486066 JCADQ9P266 1359 aa30.25■■■□□ 2.43
CHRD-216ENST00000486066 ANKRD50Q9ULJ7 1429 aa30.23■■■□□ 2.43
CHRD-216ENST00000486066 RIMS2Q9UQ26 1411 aa30.23■■■□□ 2.43
CHRD-216ENST00000486066 UNC13BO14795 1591 aa30.21■■■□□ 2.43
CHRD-216ENST00000486066 ADAMTS13Q76LX8 1427 aa30.2■■■□□ 2.42
CHRD-216ENST00000486066 LRP6O75581 1613 aa30.19■■■□□ 2.42
CHRD-216ENST00000486066 AHDC1Q5TGY3 1603 aaPredicted RBP30.18■■■□□ 2.42
CHRD-216ENST00000486066 TBX22Q9Y458 520 aa30.18■■■□□ 2.42
CHRD-216ENST00000486066 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.17■■■□□ 2.42
CHRD-216ENST00000486066 DIP2AQ14689 1571 aa30.17■■■□□ 2.42
CHRD-216ENST00000486066 E9PCH4 1651 aa30.16■■■□□ 2.42
CHRD-216ENST00000486066 SHPRHQ149N8 1683 aa30.15■■■□□ 2.42
CHRD-216ENST00000486066 APLP2Q06481 763 aa30.15■■■□□ 2.42
CHRD-216ENST00000486066 PIK3R4Q99570 1358 aa30.12■■■□□ 2.41
CHRD-216ENST00000486066 HDGFP51858 240 aaKnown RBP30.09■■■□□ 2.41
CHRD-216ENST00000486066 SPATA31A6Q5VVP1 1343 aa30.09■■■□□ 2.41
CHRD-216ENST00000486066 BCANQ96GW7 911 aa30.09■■■□□ 2.41
CHRD-216ENST00000486066 IQGAP3Q86VI3 1631 aa30.08■■■□□ 2.41
CHRD-216ENST00000486066 PPP1R15AO75807 674 aaPredicted RBP30.06■■■□□ 2.4
CHRD-216ENST00000486066 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.05■■■□□ 2.4
CHRD-216ENST00000486066 PTPRUQ92729 1446 aa30.05■■■□□ 2.4
CHRD-216ENST00000486066 C19orf44Q9H6X5 657 aa30.03■■■□□ 2.4
CHRD-216ENST00000486066 NRXN3Q9Y4C0 1643 aa30.03■■■□□ 2.4
CHRD-216ENST00000486066 TRPM2O94759 1503 aa30.02■■■□□ 2.4
CHRD-216ENST00000486066 CADPS2Q86UW7 1296 aa30.02■■■□□ 2.4
CHRD-216ENST00000486066 XRN1Q8IZH2 1706 aaKnown RBP30.02■■■□□ 2.4
CHRD-216ENST00000486066 FAM50AQ14320 339 aaKnown RBP29.99■■■□□ 2.39
CHRD-216ENST00000486066 DCCP43146 1447 aa29.98■■■□□ 2.39
CHRD-216ENST00000486066 ROCK1Q13464 1354 aa29.98■■■□□ 2.39
CHRD-216ENST00000486066 SETBP1Q9Y6X0 1596 aa29.96■■■□□ 2.39
CHRD-216ENST00000486066 ZNF772Q68DY9 489 aaPredicted RBP29.96■■■□□ 2.39
CHRD-216ENST00000486066 UPF1Q92900 1129 aaKnown RBP eCLIP29.96■■■□□ 2.39
CHRD-216ENST00000486066 NHSL1Q5SYE7 1610 aa29.96■■■□□ 2.39
CHRD-216ENST00000486066 NUTM2DQ5VT03 806 aaPredicted RBP29.95■■■□□ 2.39
CHRD-216ENST00000486066 BRINP3Q76B58 766 aa29.95■■■□□ 2.39
CHRD-216ENST00000486066 CDK12Q9NYV4 1490 aaPredicted RBP29.93■■■□□ 2.38
CHRD-216ENST00000486066 ASXL1Q8IXJ9 1541 aa29.93■■■□□ 2.38
CHRD-216ENST00000486066 ATF3P18847 181 aa29.93■■■□□ 2.38
CHRD-216ENST00000486066 SETD5Q9C0A6 1442 aa29.92■■■□□ 2.38
CHRD-216ENST00000486066 C14orf37Q86TY3 774 aa29.91■■■□□ 2.38
CHRD-216ENST00000486066 AMOTL2Q9Y2J4 779 aa29.91■■■□□ 2.38
CHRD-216ENST00000486066 MST1RQ04912 1400 aa29.9■■■□□ 2.38
CHRD-216ENST00000486066 CHGAP10645 457 aaKnown RBP29.9■■■□□ 2.38
CHRD-216ENST00000486066 MEX3CQ5U5Q3 659 aaKnown RBP29.87■■■□□ 2.37
CHRD-216ENST00000486066 SRCAPQ6ZRS2 3230 aa29.87■■■□□ 2.37
CHRD-216ENST00000486066 SPHKAPQ2M3C7 1700 aa29.86■■■□□ 2.37
CHRD-216ENST00000486066 TRIM52Q96A61 297 aa29.84■■■□□ 2.37
CHRD-216ENST00000486066 NUP155O75694 1391 aa29.83■■■□□ 2.37
CHRD-216ENST00000486066 RXRBP28702 533 aa29.81■■■□□ 2.36
CHRD-216ENST00000486066 METP08581 1390 aa29.8■■■□□ 2.36
CHRD-216ENST00000486066 NALCNQ8IZF0 1738 aa29.8■■■□□ 2.36
CHRD-216ENST00000486066 LAMC1P11047 1609 aa29.8■■■□□ 2.36
CHRD-216ENST00000486066 ADGRL3Q9HAR2 1447 aa29.79■■■□□ 2.36
CHRD-216ENST00000486066 NEXMIFQ5QGS0 1516 aa29.77■■■□□ 2.36
CHRD-216ENST00000486066 AFF2P51816 1311 aa29.76■■■□□ 2.36
CHRD-216ENST00000486066 PNPLA6Q8IY17 1366 aa29.75■■■□□ 2.35
CHRD-216ENST00000486066 RGS12O14924 1447 aa29.73■■■□□ 2.35
CHRD-216ENST00000486066 NUTM2BA6NNL0 878 aaPredicted RBP29.73■■■□□ 2.35
CHRD-216ENST00000486066 NUTM2EB1AL46 878 aaPredicted RBP29.73■■■□□ 2.35
CHRD-216ENST00000486066 NUTM2AQ8IVF1 878 aaPredicted RBP29.73■■■□□ 2.35
CHRD-216ENST00000486066 CLTCL1P53675 1640 aa29.72■■■□□ 2.35
CHRD-216ENST00000486066 LRRC59Q96AG4 307 aaKnown RBP29.71■■■□□ 2.35
CHRD-216ENST00000486066 DDX17Q92841 729 aaKnown RBP29.67■■■□□ 2.34
CHRD-216ENST00000486066 PRAG1Q86YV5 1406 aa29.67■■■□□ 2.34
CHRD-216ENST00000486066 EP400Q96L91 3159 aa29.66■■■□□ 2.34
CHRD-216ENST00000486066 C1orf167Q5SNV9 1468 aa29.66■■■□□ 2.34
CHRD-216ENST00000486066 PTCH1Q13635 1447 aa29.64■■■□□ 2.34
CHRD-216ENST00000486066 RBM6P78332 1123 aaKnown RBP29.63■■■□□ 2.33
CHRD-216ENST00000486066 KIF1BO60333 1816 aa29.61■■■□□ 2.33
CHRD-216ENST00000486066 C8orf37Q96NL8 207 aa29.6■■■□□ 2.33
CHRD-216ENST00000486066 QTRT2Q9H974 415 aaKnown RBP29.6■■■□□ 2.33
CHRD-216ENST00000486066 ZNF326Q5BKZ1 582 aaKnown RBP29.59■■■□□ 2.33
CHRD-216ENST00000486066 SOS2Q07890 1332 aaPredicted RBP29.59■■■□□ 2.33
CHRD-216ENST00000486066 COL22A1Q8NFW1 1626 aaPredicted RBP29.58■■■□□ 2.33
CHRD-216ENST00000486066 ROBO2Q9HCK4 1378 aa29.56■■■□□ 2.32
CHRD-216ENST00000486066 ITGAEP38570 1179 aa29.52■■■□□ 2.32
CHRD-216ENST00000486066 FNBP4Q8N3X1 1017 aaPredicted RBP29.49■■■□□ 2.31
CHRD-216ENST00000486066 ORAI2Q96SN7 254 aa29.49■■■□□ 2.31
CHRD-216ENST00000486066 NAIPQ13075 1403 aa29.48■■■□□ 2.31
CHRD-216ENST00000486066 PPLO60437 1756 aa29.48■■■□□ 2.31
CHRD-216ENST00000486066 MYOM2P54296 1465 aa29.48■■■□□ 2.31
CHRD-216ENST00000486066 ATRNO75882 1429 aa29.47■■■□□ 2.31
CHRD-216ENST00000486066 ADAMTS2O95450 1211 aa29.47■■■□□ 2.31
CHRD-216ENST00000486066 NGLY1Q96IV0 654 aa29.47■■■□□ 2.31
CHRD-216ENST00000486066 CDC42BPGQ6DT37 1551 aa29.45■■■□□ 2.31
CHRD-216ENST00000486066 MARF1Q9Y4F3 1742 aaKnown RBP29.45■■■□□ 2.3
CHRD-216ENST00000486066 HFM1A2PYH4 1435 aa29.45■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms