RNA–Protein interactions for RNA: ENST00000485158.1

NUP188-206, Transcript of nucleoporin 188, humanhuman

TSL 2

Gene NUP188, Length 392 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-206ENST00000485158 ZFYVE9O95405 1425 aa21.45■■□□□ 1.02
NUP188-206ENST00000485158 PLEKHG1Q9ULL1 1385 aa21.42■■□□□ 1.02
NUP188-206ENST00000485158 ANKRD50Q9ULJ7 1429 aa21.41■■□□□ 1.02
NUP188-206ENST00000485158 MSH6P52701 1360 aa21.39■■□□□ 1.02
NUP188-206ENST00000485158 POTEAQ6S8J7 498 aa21.39■■□□□ 1.01
NUP188-206ENST00000485158 NCOA3Q9Y6Q9 1424 aa21.38■■□□□ 1.01
NUP188-206ENST00000485158 RBM33Q96EV2 1170 aaKnown RBP21.38■■□□□ 1.01
NUP188-206ENST00000485158 SLAIN2Q9P270 581 aa21.38■■□□□ 1.01
NUP188-206ENST00000485158 CHD2O14647 1828 aaKnown RBP21.38■■□□□ 1.01
NUP188-206ENST00000485158 TMEM131LA2VDJ0 1609 aa21.37■■□□□ 1.01
NUP188-206ENST00000485158 HDGFP51858 240 aaKnown RBP21.37■■□□□ 1.01
NUP188-206ENST00000485158 RIMS2Q9UQ26 1411 aa21.36■■□□□ 1.01
NUP188-206ENST00000485158 TBX22Q9Y458 520 aa21.35■■□□□ 1.01
NUP188-206ENST00000485158 MYO5BQ9ULV0 1848 aa21.33■■□□□ 1.01
NUP188-206ENST00000485158 GCC2Q8IWJ2 1684 aa21.33■■□□□ 1
NUP188-206ENST00000485158 JCADQ9P266 1359 aa21.33■■□□□ 1
NUP188-206ENST00000485158 UNC13BO14795 1591 aa21.32■■□□□ 1
NUP188-206ENST00000485158 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.31■■□□□ 1
NUP188-206ENST00000485158 BCANQ96GW7 911 aa21.31■■□□□ 1
NUP188-206ENST00000485158 PHLPP1O60346 1717 aa21.31■■□□□ 1
NUP188-206ENST00000485158 ADAMTS13Q76LX8 1427 aa21.3■■□□□ 1
NUP188-206ENST00000485158 PIK3R4Q99570 1358 aa21.3■■□□□ 1
NUP188-206ENST00000485158 COL16A1Q07092 1604 aaPredicted RBP21.29■■□□□ 1
NUP188-206ENST00000485158 PPP1R15AO75807 674 aaPredicted RBP21.29■■□□□ 1
NUP188-206ENST00000485158 FAM50AQ14320 339 aaKnown RBP21.29■■□□□ 1
NUP188-206ENST00000485158 DIP2AQ14689 1571 aa21.28■■□□□ 1
NUP188-206ENST00000485158 ROCK1Q13464 1354 aa21.27■■□□□ 1
NUP188-206ENST00000485158 E9PCH4 1651 aa21.26■□□□□ 0.99
NUP188-206ENST00000485158 SPATA31A6Q5VVP1 1343 aa21.25■□□□□ 0.99
NUP188-206ENST00000485158 C19orf44Q9H6X5 657 aa21.24■□□□□ 0.99
NUP188-206ENST00000485158 AHDC1Q5TGY3 1603 aaPredicted RBP21.24■□□□□ 0.99
NUP188-206ENST00000485158 IQGAP3Q86VI3 1631 aa21.24■□□□□ 0.99
NUP188-206ENST00000485158 CADPS2Q86UW7 1296 aa21.23■□□□□ 0.99
NUP188-206ENST00000485158 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.22■□□□□ 0.99
NUP188-206ENST00000485158 LRP6O75581 1613 aa21.21■□□□□ 0.99
NUP188-206ENST00000485158 TRPM2O94759 1503 aa21.19■□□□□ 0.98
NUP188-206ENST00000485158 DCCP43146 1447 aa21.18■□□□□ 0.98
NUP188-206ENST00000485158 SHPRHQ149N8 1683 aa21.18■□□□□ 0.98
NUP188-206ENST00000485158 CHGAP10645 457 aaKnown RBP21.17■□□□□ 0.98
NUP188-206ENST00000485158 ATF3P18847 181 aa21.17■□□□□ 0.98
NUP188-206ENST00000485158 PTPRUQ92729 1446 aa21.17■□□□□ 0.98
NUP188-206ENST00000485158 NUTM2DQ5VT03 806 aaPredicted RBP21.16■□□□□ 0.98
NUP188-206ENST00000485158 C14orf37Q86TY3 774 aa21.16■□□□□ 0.98
NUP188-206ENST00000485158 AMOTL2Q9Y2J4 779 aa21.16■□□□□ 0.98
NUP188-206ENST00000485158 ZNF772Q68DY9 489 aaPredicted RBP21.15■□□□□ 0.98
NUP188-206ENST00000485158 SETD1AO15047 1707 aaKnown RBP21.15■□□□□ 0.98
NUP188-206ENST00000485158 NUP155O75694 1391 aa21.14■□□□□ 0.98
NUP188-206ENST00000485158 BRINP3Q76B58 766 aa21.14■□□□□ 0.97
NUP188-206ENST00000485158 SETBP1Q9Y6X0 1596 aa21.14■□□□□ 0.97
NUP188-206ENST00000485158 NRXN3Q9Y4C0 1643 aa21.13■□□□□ 0.97
NUP188-206ENST00000485158 XRN1Q8IZH2 1706 aaKnown RBP21.12■□□□□ 0.97
NUP188-206ENST00000485158 SETD5Q9C0A6 1442 aa21.1■□□□□ 0.97
NUP188-206ENST00000485158 ASXL1Q8IXJ9 1541 aa21.09■□□□□ 0.97
NUP188-206ENST00000485158 MST1RQ04912 1400 aa21.08■□□□□ 0.97
NUP188-206ENST00000485158 MEX3CQ5U5Q3 659 aaKnown RBP21.08■□□□□ 0.97
NUP188-206ENST00000485158 CDK12Q9NYV4 1490 aaPredicted RBP21.07■□□□□ 0.96
NUP188-206ENST00000485158 UPF1Q92900 1129 aaKnown RBP eCLIP21.07■□□□□ 0.96
NUP188-206ENST00000485158 SPHKAPQ2M3C7 1700 aa21.06■□□□□ 0.96
NUP188-206ENST00000485158 NHSL1Q5SYE7 1610 aa21.05■□□□□ 0.96
NUP188-206ENST00000485158 METP08581 1390 aa21.05■□□□□ 0.96
NUP188-206ENST00000485158 RXRBP28702 533 aa21.02■□□□□ 0.96
NUP188-206ENST00000485158 ADGRL3Q9HAR2 1447 aa21.02■□□□□ 0.96
NUP188-206ENST00000485158 LRRC59Q96AG4 307 aaKnown RBP21.01■□□□□ 0.95
NUP188-206ENST00000485158 NEXMIFQ5QGS0 1516 aa21■□□□□ 0.95
NUP188-206ENST00000485158 TRIM52Q96A61 297 aa21■□□□□ 0.95
NUP188-206ENST00000485158 AFF2P51816 1311 aa20.98■□□□□ 0.95
NUP188-206ENST00000485158 ZNF326Q5BKZ1 582 aaKnown RBP20.97■□□□□ 0.95
NUP188-206ENST00000485158 PNPLA6Q8IY17 1366 aa20.97■□□□□ 0.95
NUP188-206ENST00000485158 LAMC1P11047 1609 aa20.96■□□□□ 0.95
NUP188-206ENST00000485158 CLTCL1P53675 1640 aa20.96■□□□□ 0.95
NUP188-206ENST00000485158 NUTM2BA6NNL0 878 aaPredicted RBP20.96■□□□□ 0.95
NUP188-206ENST00000485158 NUTM2EB1AL46 878 aaPredicted RBP20.96■□□□□ 0.95
NUP188-206ENST00000485158 NUTM2AQ8IVF1 878 aaPredicted RBP20.96■□□□□ 0.95
NUP188-206ENST00000485158 PRAG1Q86YV5 1406 aa20.95■□□□□ 0.95
NUP188-206ENST00000485158 NALCNQ8IZF0 1738 aa20.95■□□□□ 0.94
NUP188-206ENST00000485158 ITGAEP38570 1179 aa20.95■□□□□ 0.94
NUP188-206ENST00000485158 PTCH1Q13635 1447 aa20.95■□□□□ 0.94
NUP188-206ENST00000485158 C1orf167Q5SNV9 1468 aa20.93■□□□□ 0.94
NUP188-206ENST00000485158 RBM6P78332 1123 aaKnown RBP20.9■□□□□ 0.94
NUP188-206ENST00000485158 DDX17Q92841 729 aaKnown RBP20.9■□□□□ 0.94
NUP188-206ENST00000485158 RGS12O14924 1447 aa20.89■□□□□ 0.94
NUP188-206ENST00000485158 SOS2Q07890 1332 aaPredicted RBP20.89■□□□□ 0.93
NUP188-206ENST00000485158 KIF1BO60333 1816 aa20.89■□□□□ 0.93
NUP188-206ENST00000485158 NAIPQ13075 1403 aa20.88■□□□□ 0.93
NUP188-206ENST00000485158 VGFO15240 615 aaPredicted RBP20.88■□□□□ 0.93
NUP188-206ENST00000485158 C8orf37Q96NL8 207 aa20.88■□□□□ 0.93
NUP188-206ENST00000485158 QTRT2Q9H974 415 aaKnown RBP20.88■□□□□ 0.93
NUP188-206ENST00000485158 RRBP1Q9P2E9 1410 aaKnown RBP20.87■□□□□ 0.93
NUP188-206ENST00000485158 ROBO2Q9HCK4 1378 aa20.87■□□□□ 0.93
NUP188-206ENST00000485158 RPGRIP1LQ68CZ1 1315 aa20.86■□□□□ 0.93
NUP188-206ENST00000485158 SRCAPQ6ZRS2 3230 aa20.83■□□□□ 0.93
NUP188-206ENST00000485158 HFM1A2PYH4 1435 aa20.83■□□□□ 0.93
NUP188-206ENST00000485158 ORAI2Q96SN7 254 aa20.82■□□□□ 0.92
NUP188-206ENST00000485158 COL22A1Q8NFW1 1626 aaPredicted RBP20.82■□□□□ 0.92
NUP188-206ENST00000485158 FNBP4Q8N3X1 1017 aaPredicted RBP20.81■□□□□ 0.92
NUP188-206ENST00000485158 NGLY1Q96IV0 654 aa20.81■□□□□ 0.92
NUP188-206ENST00000485158 ADAMTS2O95450 1211 aa20.79■□□□□ 0.92
NUP188-206ENST00000485158 PPARGC1BQ86YN6 1023 aaKnown RBP20.79■□□□□ 0.92
NUP188-206ENST00000485158 PPLO60437 1756 aa20.78■□□□□ 0.92
NUP188-206ENST00000485158 CDC42BPGQ6DT37 1551 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms