RNA–Protein interactions for RNA: ENST00000485136.5

CNOT10-217, Transcript of CCR4-NOT transcription complex subunit 10, humanhuman

TSL 2

Gene CNOT10, Length 608 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT10-217ENST00000485136 POLR3EQ9NVU0 708 aa12.71□□□□□ -0.37
CNOT10-217ENST00000485136 ATP1B4Q9UN42 357 aaPredicted RBP12.71□□□□□ -0.37
CNOT10-217ENST00000485136 POTEEQ6S8J3 1075 aa12.7□□□□□ -0.38
CNOT10-217ENST00000485136 PROCA1Q8NCQ7 364 aaPredicted RBP12.69□□□□□ -0.38
CNOT10-217ENST00000485136 MARVELD3Q96A59 401 aa12.69□□□□□ -0.38
CNOT10-217ENST00000485136 AXIN2Q9Y2T1 843 aa12.69□□□□□ -0.38
CNOT10-217ENST00000485136 PBX2P40425 430 aa12.68□□□□□ -0.38
CNOT10-217ENST00000485136 CLK2P49760 499 aaKnown RBP12.68□□□□□ -0.38
CNOT10-217ENST00000485136 FLIIQ13045 1269 aa12.68□□□□□ -0.38
CNOT10-217ENST00000485136 DMRTA1Q5VZB9 504 aa12.68□□□□□ -0.38
CNOT10-217ENST00000485136 SLC4A5Q9BY07 1137 aa12.68□□□□□ -0.38
CNOT10-217ENST00000485136 RABGEF1Q9UJ41 708 aa12.68□□□□□ -0.38
CNOT10-217ENST00000485136 SPIRE2Q8WWL2 714 aa12.66□□□□□ -0.38
CNOT10-217ENST00000485136 ZMYND15Q9H091 742 aa12.66□□□□□ -0.38
CNOT10-217ENST00000485136 SEPT9Q9UHD8 586 aaPredicted RBP12.65□□□□□ -0.38
CNOT10-217ENST00000485136 FAM205CA6NFA0 338 aa12.64□□□□□ -0.39
CNOT10-217ENST00000485136 NUTM1Q86Y26 1132 aa12.64□□□□□ -0.39
CNOT10-217ENST00000485136 ZNF687Q8N1G0 1237 aa12.64□□□□□ -0.39
CNOT10-217ENST00000485136 RDH13Q8NBN7 331 aa12.64□□□□□ -0.39
CNOT10-217ENST00000485136 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.64□□□□□ -0.39
CNOT10-217ENST00000485136 SUPT5HO00267 1087 aaKnown RBP12.63□□□□□ -0.39
CNOT10-217ENST00000485136 SWT1Q5T5J6 900 aaKnown RBP12.61□□□□□ -0.39
CNOT10-217ENST00000485136 RIC3Q7Z5B4 369 aa12.61□□□□□ -0.39
CNOT10-217ENST00000485136 LIMD1Q9UGP4 676 aa12.61□□□□□ -0.39
CNOT10-217ENST00000485136 VPS9D1Q9Y2B5 631 aa12.61□□□□□ -0.39
CNOT10-217ENST00000485136 RSPH4AQ5TD94 716 aa12.6□□□□□ -0.39
CNOT10-217ENST00000485136 FAM98CQ17RN3 349 aaKnown RBP12.59□□□□□ -0.39
CNOT10-217ENST00000485136 MOXD2PA6NHM9 499 aa12.58□□□□□ -0.4
CNOT10-217ENST00000485136 SPTLC1O15269 473 aa12.58□□□□□ -0.4
CNOT10-217ENST00000485136 RSBN1LQ6PCB5 846 aaPredicted RBP12.58□□□□□ -0.4
CNOT10-217ENST00000485136 HDGFP51858 240 aaKnown RBP12.57□□□□□ -0.4
CNOT10-217ENST00000485136 MCM6Q14566 821 aa12.57□□□□□ -0.4
CNOT10-217ENST00000485136 HS3ST6Q96QI5 342 aa12.57□□□□□ -0.4
CNOT10-217ENST00000485136 KDM4AO75164 1064 aa12.56□□□□□ -0.4
CNOT10-217ENST00000485136 TUSC1Q2TAM9 212 aa12.56□□□□□ -0.4
CNOT10-217ENST00000485136 NBPF3Q9H094 633 aa12.56□□□□□ -0.4
CNOT10-217ENST00000485136 SLC10A3P09131 477 aa12.55□□□□□ -0.4
CNOT10-217ENST00000485136 GCGRP47871 477 aa12.55□□□□□ -0.4
CNOT10-217ENST00000485136 SLC4A3P48751 1232 aa12.55□□□□□ -0.4
CNOT10-217ENST00000485136 POTEB3A0JP26 581 aa12.54□□□□□ -0.4
CNOT10-217ENST00000485136 NDUFV2P19404 249 aa12.54□□□□□ -0.4
CNOT10-217ENST00000485136 GJA5P36382 358 aa12.54□□□□□ -0.4
CNOT10-217ENST00000485136 RFC5P40937 340 aa12.54□□□□□ -0.4
CNOT10-217ENST00000485136 POTEBQ6S5H4 581 aa12.54□□□□□ -0.4
CNOT10-217ENST00000485136 LAPTM4BQ86VI4 370 aa12.54□□□□□ -0.4
CNOT10-217ENST00000485136 TK2O00142 265 aa12.53□□□□□ -0.4
CNOT10-217ENST00000485136 USP46P62068 366 aa12.53□□□□□ -0.4
CNOT10-217ENST00000485136 CSPP1Q1MSJ5 1256 aa12.53□□□□□ -0.4
CNOT10-217ENST00000485136 PPP2R2DQ66LE6 453 aa12.53□□□□□ -0.4
CNOT10-217ENST00000485136 UBTFP17480 764 aaKnown RBP12.52□□□□□ -0.41
CNOT10-217ENST00000485136 FBXO31Q5XUX0 539 aaPredicted RBP12.52□□□□□ -0.41
CNOT10-217ENST00000485136 SAMD7Q7Z3H4 446 aa12.52□□□□□ -0.41
CNOT10-217ENST00000485136 SLF2Q8IX21 1173 aa12.52□□□□□ -0.41
CNOT10-217ENST00000485136 BHMG1C9JSJ3 638 aaPredicted RBP12.51□□□□□ -0.41
CNOT10-217ENST00000485136 HOXA2O43364 376 aa12.5□□□□□ -0.41
CNOT10-217ENST00000485136 QPCTQ16769 361 aa12.49□□□□□ -0.41
CNOT10-217ENST00000485136 BANK1Q8NDB2 785 aa12.49□□□□□ -0.41
CNOT10-217ENST00000485136 RNF40O75150 1001 aa12.48□□□□□ -0.41
CNOT10-217ENST00000485136 LSM11P83369 360 aaKnown RBP eCLIP12.48□□□□□ -0.41
CNOT10-217ENST00000485136 TMEM259Q4ZIN3 620 aa12.48□□□□□ -0.41
CNOT10-217ENST00000485136 MRPL50Q8N5N7 158 aaKnown RBP12.48□□□□□ -0.41
CNOT10-217ENST00000485136 CLUAP1Q96AJ1 413 aa12.48□□□□□ -0.41
CNOT10-217ENST00000485136 ZFRQ96KR1 1074 aaKnown RBP12.48□□□□□ -0.41
CNOT10-217ENST00000485136 PCDHB15Q9Y5E8 787 aa12.48□□□□□ -0.41
CNOT10-217ENST00000485136 SPDYE5A6NIY4 337 aa12.47□□□□□ -0.41
CNOT10-217ENST00000485136 LILRB3O75022 631 aa12.47□□□□□ -0.41
CNOT10-217ENST00000485136 ADGRD1Q6QNK2 874 aa12.47□□□□□ -0.41
CNOT10-217ENST00000485136 A6NJR5 290 aa12.46□□□□□ -0.41
CNOT10-217ENST00000485136 CFHP08603 1231 aa12.46□□□□□ -0.41
CNOT10-217ENST00000485136 FDX1P10109 184 aa12.46□□□□□ -0.41
CNOT10-217ENST00000485136 SPNS2Q8IVW8 549 aa12.46□□□□□ -0.41
CNOT10-217ENST00000485136 PRPF38BQ5VTL8 546 aaKnown RBP12.45□□□□□ -0.42
CNOT10-217ENST00000485136 NUTM2BA6NNL0 878 aaPredicted RBP12.44□□□□□ -0.42
CNOT10-217ENST00000485136 NUTM2EB1AL46 878 aaPredicted RBP12.44□□□□□ -0.42
CNOT10-217ENST00000485136 NUTM2DQ5VT03 806 aaPredicted RBP12.44□□□□□ -0.42
CNOT10-217ENST00000485136 NUTM2AQ8IVF1 878 aaPredicted RBP12.44□□□□□ -0.42
CNOT10-217ENST00000485136 CABLES1Q8TDN4 633 aa12.44□□□□□ -0.42
CNOT10-217ENST00000485136 HLA-CQ95604 372 aa12.44□□□□□ -0.42
CNOT10-217ENST00000485136 SNRKQ9NRH2 765 aa12.44□□□□□ -0.42
CNOT10-217ENST00000485136 GUCA2AQ02747 115 aa12.43□□□□□ -0.42
CNOT10-217ENST00000485136 RTL5Q5HYW3 569 aaPredicted RBP12.43□□□□□ -0.42
CNOT10-217ENST00000485136 ZBTB3Q9H5J0 574 aa12.43□□□□□ -0.42
CNOT10-217ENST00000485136 FUT2Q10981 343 aa12.42□□□□□ -0.42
CNOT10-217ENST00000485136 GRIPAP1Q4V328 841 aa12.42□□□□□ -0.42
CNOT10-217ENST00000485136 LRCH3Q96II8 777 aa12.42□□□□□ -0.42
CNOT10-217ENST00000485136 ARXQ96QS3 562 aa12.42□□□□□ -0.42
CNOT10-217ENST00000485136 PCDHGC3Q9UN70 934 aa12.42□□□□□ -0.42
CNOT10-217ENST00000485136 RAD21O60216 631 aa12.41□□□□□ -0.42
CNOT10-217ENST00000485136 HRCP23327 699 aa12.41□□□□□ -0.42
CNOT10-217ENST00000485136 MMRN1Q13201 1228 aa12.41□□□□□ -0.42
CNOT10-217ENST00000485136 HRO43593 1189 aa12.4□□□□□ -0.42
CNOT10-217ENST00000485136 AP1G2O75843 785 aa12.4□□□□□ -0.42
CNOT10-217ENST00000485136 KMT5BQ4FZB7 885 aa12.4□□□□□ -0.42
CNOT10-217ENST00000485136 POM121Q96HA1 1249 aa12.4□□□□□ -0.42
CNOT10-217ENST00000485136 KRTAP3-3Q9BYR6 98 aa12.4□□□□□ -0.42
CNOT10-217ENST00000485136 KRTAP3-2Q9BYR7 98 aa12.4□□□□□ -0.42
CNOT10-217ENST00000485136 NECTIN2Q92692 538 aa12.39□□□□□ -0.43
CNOT10-217ENST00000485136 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.39□□□□□ -0.43
CNOT10-217ENST00000485136 TRAK2O60296 914 aa12.38□□□□□ -0.43
CNOT10-217ENST00000485136 STAC3Q96MF2 364 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms