RNA–Protein interactions for RNA: ENST00000485093.1

TM9SF3-205, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 5

Gene TM9SF3, Length 407 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-205ENST00000485093 PARP9Q8IXQ6 854 aa8.39□□□□□ -1.07
TM9SF3-205ENST00000485093 DNAJB2P25686 324 aa8.38□□□□□ -1.07
TM9SF3-205ENST00000485093 DAXXQ9UER7 740 aaPredicted RBP8.38□□□□□ -1.07
TM9SF3-205ENST00000485093 ZFRQ96KR1 1074 aaKnown RBP8.37□□□□□ -1.07
TM9SF3-205ENST00000485093 NBPF3Q9H094 633 aa8.37□□□□□ -1.07
TM9SF3-205ENST00000485093 SEPT9Q9UHD8 586 aaPredicted RBP8.37□□□□□ -1.07
TM9SF3-205ENST00000485093 NLRP7Q8WX94 980 aa8.35□□□□□ -1.07
TM9SF3-205ENST00000485093 GPCPD1Q9NPB8 672 aa8.35□□□□□ -1.07
TM9SF3-205ENST00000485093 FAM217BQ9NTX9 383 aaPredicted RBP8.35□□□□□ -1.07
TM9SF3-205ENST00000485093 LCE2BO14633 110 aa8.34□□□□□ -1.07
TM9SF3-205ENST00000485093 CLCN1P35523 988 aa8.34□□□□□ -1.07
TM9SF3-205ENST00000485093 MRPL50Q8N5N7 158 aaKnown RBP8.34□□□□□ -1.07
TM9SF3-205ENST00000485093 SLC10A3P09131 477 aa8.33□□□□□ -1.08
TM9SF3-205ENST00000485093 MS4A1P11836 297 aa8.33□□□□□ -1.08
TM9SF3-205ENST00000485093 MDM2Q00987 491 aaPredicted RBP8.33□□□□□ -1.08
TM9SF3-205ENST00000485093 KDM4CQ9H3R0 1056 aa8.33□□□□□ -1.08
TM9SF3-205ENST00000485093 GPBP1L1Q9HC44 474 aaPredicted RBP8.33□□□□□ -1.08
TM9SF3-205ENST00000485093 SWT1Q5T5J6 900 aaKnown RBP8.32□□□□□ -1.08
TM9SF3-205ENST00000485093 GIGYF2Q6Y7W6 1299 aaKnown RBP8.32□□□□□ -1.08
TM9SF3-205ENST00000485093 SOWAHBA6NEL2 793 aa8.31□□□□□ -1.08
TM9SF3-205ENST00000485093 CD46P15529 392 aa8.31□□□□□ -1.08
TM9SF3-205ENST00000485093 SSTR3P32745 418 aaPredicted RBP8.31□□□□□ -1.08
TM9SF3-205ENST00000485093 SAMD7Q7Z3H4 446 aa8.31□□□□□ -1.08
TM9SF3-205ENST00000485093 PLEKHG3A1L390 1219 aa8.3□□□□□ -1.08
TM9SF3-205ENST00000485093 FAM117AQ9C073 453 aa8.28□□□□□ -1.08
TM9SF3-205ENST00000485093 PTPN5P54829 565 aa8.27□□□□□ -1.09
TM9SF3-205ENST00000485093 THSD4Q6ZMP0 1018 aa8.27□□□□□ -1.09
TM9SF3-205ENST00000485093 GCGRP47871 477 aa8.26□□□□□ -1.09
TM9SF3-205ENST00000485093 NEUROD2Q15784 382 aa8.26□□□□□ -1.09
TM9SF3-205ENST00000485093 TTLL12Q14166 644 aaPredicted RBP8.25□□□□□ -1.09
TM9SF3-205ENST00000485093 SULF1Q8IWU6 871 aa8.25□□□□□ -1.09
TM9SF3-205ENST00000485093 SLF2Q8IX21 1173 aa8.25□□□□□ -1.09
TM9SF3-205ENST00000485093 WNT2BQ93097 391 aa8.25□□□□□ -1.09
TM9SF3-205ENST00000485093 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.25□□□□□ -1.09
TM9SF3-205ENST00000485093 HDGFP51858 240 aaKnown RBP8.23□□□□□ -1.09
TM9SF3-205ENST00000485093 ANKK1Q8NFD2 765 aa8.23□□□□□ -1.09
TM9SF3-205ENST00000485093 LRCH3Q96II8 777 aa8.23□□□□□ -1.09
TM9SF3-205ENST00000485093 GOPCQ9HD26 462 aa8.23□□□□□ -1.09
TM9SF3-205ENST00000485093 TSR3Q9UJK0 312 aaKnown RBP8.23□□□□□ -1.09
TM9SF3-205ENST00000485093 BCAMP50895 628 aa8.22□□□□□ -1.09
TM9SF3-205ENST00000485093 BEGAINQ9BUH8 593 aa8.22□□□□□ -1.09
TM9SF3-205ENST00000485093 DDX11L8A8MPP1 907 aa8.21□□□□□ -1.1
TM9SF3-205ENST00000485093 DDRGK1Q96HY6 314 aa8.21□□□□□ -1.1
TM9SF3-205ENST00000485093 ACTN4O43707 911 aaKnown RBP8.2□□□□□ -1.1
TM9SF3-205ENST00000485093 GJA5P36382 358 aa8.2□□□□□ -1.1
TM9SF3-205ENST00000485093 LAPTM4AQ15012 233 aa8.2□□□□□ -1.1
TM9SF3-205ENST00000485093 TRAF7Q6Q0C0 670 aa8.2□□□□□ -1.1
TM9SF3-205ENST00000485093 SPIRE2Q8WWL2 714 aa8.2□□□□□ -1.1
TM9SF3-205ENST00000485093 STAC3Q96MF2 364 aa8.2□□□□□ -1.1
TM9SF3-205ENST00000485093 WBP1LQ9NX94 342 aa8.2□□□□□ -1.1
TM9SF3-205ENST00000485093 APLP1P51693 650 aa8.19□□□□□ -1.1
TM9SF3-205ENST00000485093 TMEM132AQ24JP5 1023 aa8.19□□□□□ -1.1
TM9SF3-205ENST00000485093 GOLGA8CPA6NN73 597 aa8.18□□□□□ -1.1
TM9SF3-205ENST00000485093 TUSC1Q2TAM9 212 aa8.18□□□□□ -1.1
TM9SF3-205ENST00000485093 NYAP1Q6ZVC0 841 aa8.18□□□□□ -1.1
TM9SF3-205ENST00000485093 NECTIN2Q92692 538 aa8.18□□□□□ -1.1
TM9SF3-205ENST00000485093 HPS5Q9UPZ3 1129 aa8.18□□□□□ -1.1
TM9SF3-205ENST00000485093 PPP4CP60510 307 aa8.17□□□□□ -1.1
TM9SF3-205ENST00000485093 RSPH4AQ5TD94 716 aa8.17□□□□□ -1.1
TM9SF3-205ENST00000485093 IL27Q8NEV9 243 aa8.17□□□□□ -1.1
TM9SF3-205ENST00000485093 KDM4AO75164 1064 aa8.16□□□□□ -1.1
TM9SF3-205ENST00000485093 SH3D19Q5HYK7 790 aa8.16□□□□□ -1.1
TM9SF3-205ENST00000485093 MYSM1Q5VVJ2 828 aa8.16□□□□□ -1.1
TM9SF3-205ENST00000485093 TBC1D2Q9BYX2 928 aa8.16□□□□□ -1.1
TM9SF3-205ENST00000485093 SPTLC1O15269 473 aa8.15□□□□□ -1.1
TM9SF3-205ENST00000485093 ITGBL1O95965 494 aaPredicted RBP8.15□□□□□ -1.1
TM9SF3-205ENST00000485093 CFHP08603 1231 aa8.15□□□□□ -1.1
TM9SF3-205ENST00000485093 USP46P62068 366 aa8.15□□□□□ -1.1
TM9SF3-205ENST00000485093 SKIV2LQ15477 1246 aaKnown RBP8.15□□□□□ -1.1
TM9SF3-205ENST00000485093 DIXDC1Q155Q3 683 aa8.15□□□□□ -1.1
TM9SF3-205ENST00000485093 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.15□□□□□ -1.1
TM9SF3-205ENST00000485093 HOXA2O43364 376 aa8.14□□□□□ -1.11
TM9SF3-205ENST00000485093 MORN1Q5T089 497 aa8.14□□□□□ -1.11
TM9SF3-205ENST00000485093 RDH13Q8NBN7 331 aa8.14□□□□□ -1.11
TM9SF3-205ENST00000485093 ATP6V1AP38606 617 aa8.13□□□□□ -1.11
TM9SF3-205ENST00000485093 SLC4A3P48751 1232 aa8.13□□□□□ -1.11
TM9SF3-205ENST00000485093 FUT2Q10981 343 aa8.13□□□□□ -1.11
TM9SF3-205ENST00000485093 RSPH6AQ9H0K4 717 aa8.13□□□□□ -1.11
TM9SF3-205ENST00000485093 PCDHGC3Q9UN70 934 aa8.13□□□□□ -1.11
TM9SF3-205ENST00000485093 SALL2Q9Y467 1007 aaPredicted RBP8.13□□□□□ -1.11
TM9SF3-205ENST00000485093 MOXD2PA6NHM9 499 aa8.12□□□□□ -1.11
TM9SF3-205ENST00000485093 TJAP1Q5JTD0 557 aa8.12□□□□□ -1.11
TM9SF3-205ENST00000485093 FBXO31Q5XUX0 539 aaPredicted RBP8.12□□□□□ -1.11
TM9SF3-205ENST00000485093 RSBN1LQ6PCB5 846 aaPredicted RBP8.12□□□□□ -1.11
TM9SF3-205ENST00000485093 THAP11Q96EK4 314 aa8.12□□□□□ -1.11
TM9SF3-205ENST00000485093 PRR14Q9BWN1 585 aa8.12□□□□□ -1.11
TM9SF3-205ENST00000485093 LIMD1Q9UGP4 676 aa8.11□□□□□ -1.11
TM9SF3-205ENST00000485093 NDUFV2P19404 249 aa8.1□□□□□ -1.11
TM9SF3-205ENST00000485093 KMT5BQ4FZB7 885 aa8.1□□□□□ -1.11
TM9SF3-205ENST00000485093 PPP2R2DQ66LE6 453 aa8.1□□□□□ -1.11
TM9SF3-205ENST00000485093 RIC3Q7Z5B4 369 aa8.09□□□□□ -1.11
TM9SF3-205ENST00000485093 NUTM1Q86Y26 1132 aa8.09□□□□□ -1.11
TM9SF3-205ENST00000485093 SCUBE3Q8IX30 993 aa8.09□□□□□ -1.11
TM9SF3-205ENST00000485093 PROCA1Q8NCQ7 364 aaPredicted RBP8.09□□□□□ -1.11
TM9SF3-205ENST00000485093 HLA-CQ95604 372 aa8.09□□□□□ -1.11
TM9SF3-205ENST00000485093 ZNF775Q96BV0 537 aaPredicted RBP8.09□□□□□ -1.11
TM9SF3-205ENST00000485093 SLC27A5Q9Y2P5 690 aa8.09□□□□□ -1.11
TM9SF3-205ENST00000485093 PCDHB15Q9Y5E8 787 aa8.09□□□□□ -1.11
TM9SF3-205ENST00000485093 LILRB3O75022 631 aa8.08□□□□□ -1.12
TM9SF3-205ENST00000485093 BRICD5Q6PL45 260 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms