RNA–Protein interactions for RNA: ENST00000484958.5

FXR1-219, Transcript of FMR1 autosomal homolog 1, humanhuman

TSL 3

Gene FXR1, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-219ENST00000484958 GPBP1L1Q9HC44 474 aaPredicted RBP12.77□□□□□ -0.37
FXR1-219ENST00000484958 SEPT9Q9UHD8 586 aaPredicted RBP12.76□□□□□ -0.37
FXR1-219ENST00000484958 SSTR3P32745 418 aaPredicted RBP12.75□□□□□ -0.37
FXR1-219ENST00000484958 CDAN1Q8IWY9 1227 aa12.74□□□□□ -0.37
FXR1-219ENST00000484958 FAM217BQ9NTX9 383 aaPredicted RBP12.74□□□□□ -0.37
FXR1-219ENST00000484958 PCDH10Q9P2E7 1040 aa12.74□□□□□ -0.37
FXR1-219ENST00000484958 HRO43593 1189 aa12.73□□□□□ -0.37
FXR1-219ENST00000484958 SLF2Q8IX21 1173 aa12.73□□□□□ -0.37
FXR1-219ENST00000484958 DIXDC1Q155Q3 683 aa12.72□□□□□ -0.37
FXR1-219ENST00000484958 C3orf80F5H4A9 247 aa12.71□□□□□ -0.37
FXR1-219ENST00000484958 ZFRQ96KR1 1074 aaKnown RBP12.71□□□□□ -0.37
FXR1-219ENST00000484958 ANKK1Q8NFD2 765 aa12.7□□□□□ -0.38
FXR1-219ENST00000484958 NLRP7Q8WX94 980 aa12.69□□□□□ -0.38
FXR1-219ENST00000484958 LRCH3Q96II8 777 aa12.69□□□□□ -0.38
FXR1-219ENST00000484958 REPIN1Q9BWE0 567 aaKnown RBP12.69□□□□□ -0.38
FXR1-219ENST00000484958 KRTAP3-3Q9BYR6 98 aa12.69□□□□□ -0.38
FXR1-219ENST00000484958 KRTAP3-2Q9BYR7 98 aa12.69□□□□□ -0.38
FXR1-219ENST00000484958 RSPH6AQ9H0K4 717 aa12.69□□□□□ -0.38
FXR1-219ENST00000484958 DDX11L8A8MPP1 907 aa12.68□□□□□ -0.38
FXR1-219ENST00000484958 SWT1Q5T5J6 900 aaKnown RBP12.68□□□□□ -0.38
FXR1-219ENST00000484958 SAMD7Q7Z3H4 446 aa12.66□□□□□ -0.38
FXR1-219ENST00000484958 RDH13Q8NBN7 331 aa12.66□□□□□ -0.38
FXR1-219ENST00000484958 IL27Q8NEV9 243 aa12.66□□□□□ -0.38
FXR1-219ENST00000484958 BEGAINQ9BUH8 593 aa12.66□□□□□ -0.38
FXR1-219ENST00000484958 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.66□□□□□ -0.38
FXR1-219ENST00000484958 MS4A1P11836 297 aa12.65□□□□□ -0.38
FXR1-219ENST00000484958 FAM117AQ9C073 453 aa12.65□□□□□ -0.38
FXR1-219ENST00000484958 PRR14Q9BWN1 585 aa12.64□□□□□ -0.39
FXR1-219ENST00000484958 CD46P15529 392 aa12.63□□□□□ -0.39
FXR1-219ENST00000484958 WNT2BQ93097 391 aa12.63□□□□□ -0.39
FXR1-219ENST00000484958 GOPCQ9HD26 462 aa12.63□□□□□ -0.39
FXR1-219ENST00000484958 RNF40O75150 1001 aa12.62□□□□□ -0.39
FXR1-219ENST00000484958 NUTM1Q86Y26 1132 aa12.62□□□□□ -0.39
FXR1-219ENST00000484958 KMT5BQ4FZB7 885 aa12.6□□□□□ -0.39
FXR1-219ENST00000484958 SOWAHBA6NEL2 793 aa12.59□□□□□ -0.39
FXR1-219ENST00000484958 USP46P62068 366 aa12.59□□□□□ -0.39
FXR1-219ENST00000484958 GRIPAP1Q4V328 841 aa12.59□□□□□ -0.39
FXR1-219ENST00000484958 PPP4CP60510 307 aa12.58□□□□□ -0.4
FXR1-219ENST00000484958 GCGRP47871 477 aa12.56□□□□□ -0.4
FXR1-219ENST00000484958 TSR3Q9UJK0 312 aaKnown RBP12.56□□□□□ -0.4
FXR1-219ENST00000484958 PLEKHG3A1L390 1219 aa12.55□□□□□ -0.4
FXR1-219ENST00000484958 KDM4AO75164 1064 aa12.55□□□□□ -0.4
FXR1-219ENST00000484958 SH3D19Q5HYK7 790 aa12.55□□□□□ -0.4
FXR1-219ENST00000484958 NYAP1Q6ZVC0 841 aa12.54□□□□□ -0.4
FXR1-219ENST00000484958 PCMTD1Q96MG8 357 aaPredicted RBP12.54□□□□□ -0.4
FXR1-219ENST00000484958 SLC10A3P09131 477 aa12.53□□□□□ -0.4
FXR1-219ENST00000484958 SKIV2LQ15477 1246 aaKnown RBP12.53□□□□□ -0.4
FXR1-219ENST00000484958 TBC1D2Q9BYX2 928 aa12.53□□□□□ -0.4
FXR1-219ENST00000484958 HPS5Q9UPZ3 1129 aa12.53□□□□□ -0.4
FXR1-219ENST00000484958 CFHP08603 1231 aa12.52□□□□□ -0.41
FXR1-219ENST00000484958 GJA5P36382 358 aa12.52□□□□□ -0.41
FXR1-219ENST00000484958 SPIRE2Q8WWL2 714 aa12.51□□□□□ -0.41
FXR1-219ENST00000484958 MYT1LQ9UL68 1186 aa12.51□□□□□ -0.41
FXR1-219ENST00000484958 ATP1B4Q9UN42 357 aaPredicted RBP12.51□□□□□ -0.41
FXR1-219ENST00000484958 THSD4Q6ZMP0 1018 aa12.5□□□□□ -0.41
FXR1-219ENST00000484958 KCTD12Q96CX2 325 aaKnown RBP12.5□□□□□ -0.41
FXR1-219ENST00000484958 BCAMP50895 628 aa12.49□□□□□ -0.41
FXR1-219ENST00000484958 ATP6V1AP38606 617 aa12.47□□□□□ -0.41
FXR1-219ENST00000484958 MYSM1Q5VVJ2 828 aa12.47□□□□□ -0.41
FXR1-219ENST00000484958 ACTN4O43707 911 aaKnown RBP12.46□□□□□ -0.41
FXR1-219ENST00000484958 CLK2P49760 499 aaKnown RBP12.46□□□□□ -0.41
FXR1-219ENST00000484958 TUSC1Q2TAM9 212 aa12.46□□□□□ -0.41
FXR1-219ENST00000484958 RIC3Q7Z5B4 369 aa12.45□□□□□ -0.42
FXR1-219ENST00000484958 SPTLC1O15269 473 aa12.43□□□□□ -0.42
FXR1-219ENST00000484958 HOXA2O43364 376 aa12.43□□□□□ -0.42
FXR1-219ENST00000484958 POLR3EQ9NVU0 708 aa12.43□□□□□ -0.42
FXR1-219ENST00000484958 FUT2Q10981 343 aa12.42□□□□□ -0.42
FXR1-219ENST00000484958 WBP1LQ9NX94 342 aa12.42□□□□□ -0.42
FXR1-219ENST00000484958 RSBN1LQ6PCB5 846 aaPredicted RBP12.41□□□□□ -0.42
FXR1-219ENST00000484958 MOXD2PA6NHM9 499 aa12.4□□□□□ -0.42
FXR1-219ENST00000484958 FDX1P10109 184 aa12.4□□□□□ -0.42
FXR1-219ENST00000484958 Q3C1V9 767 aa12.4□□□□□ -0.42
FXR1-219ENST00000484958 PCDHB3Q9Y5E6 796 aa12.4□□□□□ -0.42
FXR1-219ENST00000484958 GTF3C3Q9Y5Q9 886 aa12.4□□□□□ -0.42
FXR1-219ENST00000484958 NR1I2O75469 434 aa12.39□□□□□ -0.43
FXR1-219ENST00000484958 PRPF38BQ5VTL8 546 aaKnown RBP12.39□□□□□ -0.43
FXR1-219ENST00000484958 ERICH6Q7L0X2 663 aa12.39□□□□□ -0.43
FXR1-219ENST00000484958 SPDYE5A6NIY4 337 aa12.38□□□□□ -0.43
FXR1-219ENST00000484958 PTPN5P54829 565 aa12.38□□□□□ -0.43
FXR1-219ENST00000484958 SPNS2Q8IVW8 549 aa12.38□□□□□ -0.43
FXR1-219ENST00000484958 RNF166Q96A37 237 aaPredicted RBP12.38□□□□□ -0.43
FXR1-219ENST00000484958 HCSTQ9UBK5 93 aa12.38□□□□□ -0.43
FXR1-219ENST00000484958 APLP1P51693 650 aa12.37□□□□□ -0.43
FXR1-219ENST00000484958 ZBTB3Q9H5J0 574 aa12.36□□□□□ -0.43
FXR1-219ENST00000484958 NDUFV2P19404 249 aa12.35□□□□□ -0.43
FXR1-219ENST00000484958 MORN1Q5T089 497 aa12.35□□□□□ -0.43
FXR1-219ENST00000484958 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.35□□□□□ -0.43
FXR1-219ENST00000484958 NUTM2BA6NNL0 878 aaPredicted RBP12.34□□□□□ -0.43
FXR1-219ENST00000484958 NUTM2EB1AL46 878 aaPredicted RBP12.34□□□□□ -0.43
FXR1-219ENST00000484958 NUTM2DQ5VT03 806 aaPredicted RBP12.34□□□□□ -0.43
FXR1-219ENST00000484958 NUTM2AQ8IVF1 878 aaPredicted RBP12.34□□□□□ -0.43
FXR1-219ENST00000484958 LIMD1Q9UGP4 676 aa12.34□□□□□ -0.43
FXR1-219ENST00000484958 SALL2Q9Y467 1007 aaPredicted RBP12.34□□□□□ -0.43
FXR1-219ENST00000484958 MTMR2Q13614 643 aa12.32□□□□□ -0.44
FXR1-219ENST00000484958 PROCA1Q8NCQ7 364 aaPredicted RBP12.32□□□□□ -0.44
FXR1-219ENST00000484958 TMEM259Q4ZIN3 620 aa12.31□□□□□ -0.44
FXR1-219ENST00000484958 PPP2R2DQ66LE6 453 aa12.31□□□□□ -0.44
FXR1-219ENST00000484958 C6orf229H3BNL8 230 aa12.3□□□□□ -0.44
FXR1-219ENST00000484958 CSPP1Q1MSJ5 1256 aa12.3□□□□□ -0.44
FXR1-219ENST00000484958 PUS10Q3MIT2 529 aaKnown RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms