RNA–Protein interactions for RNA: ENST00000484330.5

ERCC8-206, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 3

Gene ERCC8, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-206ENST00000484330 LRCH3Q96II8 777 aa7.16□□□□□ -1.26
ERCC8-206ENST00000484330 AK7Q96M32 723 aa7.16□□□□□ -1.26
ERCC8-206ENST00000484330 IRF6O14896 467 aa7.15□□□□□ -1.26
ERCC8-206ENST00000484330 PPP1R18Q6NYC8 613 aa7.15□□□□□ -1.26
ERCC8-206ENST00000484330 TTC13Q8NBP0 860 aa7.15□□□□□ -1.26
ERCC8-206ENST00000484330 RBM46Q8TBY0 533 aaKnown RBP7.15□□□□□ -1.26
ERCC8-206ENST00000484330 PDZRN3Q9UPQ7 1066 aa7.14□□□□□ -1.27
ERCC8-206ENST00000484330 PRKCSHP14314 528 aaPredicted RBP7.13□□□□□ -1.27
ERCC8-206ENST00000484330 PPP4CP60510 307 aa7.13□□□□□ -1.27
ERCC8-206ENST00000484330 FECHP22830 423 aa7.12□□□□□ -1.27
ERCC8-206ENST00000484330 SLC24A3Q9HC58 644 aa7.12□□□□□ -1.27
ERCC8-206ENST00000484330 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.12□□□□□ -1.27
ERCC8-206ENST00000484330 STK17AQ9UEE5 414 aa7.12□□□□□ -1.27
ERCC8-206ENST00000484330 TSKSQ9UJT2 592 aa7.12□□□□□ -1.27
ERCC8-206ENST00000484330 PNMA3Q9UL41 463 aa7.12□□□□□ -1.27
ERCC8-206ENST00000484330 ADGRG1Q9Y653 693 aa7.12□□□□□ -1.27
ERCC8-206ENST00000484330 HDGFP51858 240 aaKnown RBP7.11□□□□□ -1.27
ERCC8-206ENST00000484330 TATDN2Q93075 761 aa7.11□□□□□ -1.27
ERCC8-206ENST00000484330 CCDC102AQ96A19 550 aa7.11□□□□□ -1.27
ERCC8-206ENST00000484330 NUDT18Q6ZVK8 323 aa7.1□□□□□ -1.27
ERCC8-206ENST00000484330 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.09□□□□□ -1.27
ERCC8-206ENST00000484330 SLC4A3P48751 1232 aa7.09□□□□□ -1.27
ERCC8-206ENST00000484330 METTL3Q86U44 580 aaKnown RBP7.09□□□□□ -1.27
ERCC8-206ENST00000484330 IL21Q9HBE4 155 aa7.09□□□□□ -1.27
ERCC8-206ENST00000484330 DNAJB2P25686 324 aa7.08□□□□□ -1.28
ERCC8-206ENST00000484330 PXYLP1Q8TE99 480 aa7.08□□□□□ -1.28
ERCC8-206ENST00000484330 MTRQ99707 1265 aa7.08□□□□□ -1.28
ERCC8-206ENST00000484330 FAM198AQ9UFP1 575 aa7.08□□□□□ -1.28
ERCC8-206ENST00000484330 TRIM66O15016 1216 aa7.07□□□□□ -1.28
ERCC8-206ENST00000484330 EYA1Q99502 592 aa7.07□□□□□ -1.28
ERCC8-206ENST00000484330 CLCN1P35523 988 aa7.06□□□□□ -1.28
ERCC8-206ENST00000484330 AMHR2Q16671 573 aa7.06□□□□□ -1.28
ERCC8-206ENST00000484330 ZNF516Q92618 1163 aa7.06□□□□□ -1.28
ERCC8-206ENST00000484330 RCCD1A6NED2 376 aa7.05□□□□□ -1.28
ERCC8-206ENST00000484330 FAM161AQ3B820 660 aa7.05□□□□□ -1.28
ERCC8-206ENST00000484330 RSPH4AQ5TD94 716 aa7.05□□□□□ -1.28
ERCC8-206ENST00000484330 NECTIN2Q92692 538 aa7.05□□□□□ -1.28
ERCC8-206ENST00000484330 POTECB2RU33 542 aa7.04□□□□□ -1.28
ERCC8-206ENST00000484330 SMAPO00193 183 aa7.04□□□□□ -1.28
ERCC8-206ENST00000484330 PDE4DQ08499 809 aa7.04□□□□□ -1.28
ERCC8-206ENST00000484330 TTLL12Q14166 644 aaPredicted RBP7.04□□□□□ -1.28
ERCC8-206ENST00000484330 GPCPD1Q9NPB8 672 aa7.04□□□□□ -1.28
ERCC8-206ENST00000484330 DAXXQ9UER7 740 aaPredicted RBP7.04□□□□□ -1.28
ERCC8-206ENST00000484330 SAMD7Q7Z3H4 446 aa7.03□□□□□ -1.28
ERCC8-206ENST00000484330 SULF1Q8IWU6 871 aa7.03□□□□□ -1.28
ERCC8-206ENST00000484330 NKX2-3Q8TAU0 364 aa7.03□□□□□ -1.28
ERCC8-206ENST00000484330 MYT1Q01538 1121 aa7.02□□□□□ -1.29
ERCC8-206ENST00000484330 LCE2AQ5TA79 106 aaPredicted RBP7.02□□□□□ -1.29
ERCC8-206ENST00000484330 TREML4Q6UXN2 200 aa7.02□□□□□ -1.29
ERCC8-206ENST00000484330 SLF2Q8IX21 1173 aa7.02□□□□□ -1.29
ERCC8-206ENST00000484330 TMUB1Q9BVT8 246 aa7.02□□□□□ -1.29
ERCC8-206ENST00000484330 TMEM134Q9H6X4 195 aa7.02□□□□□ -1.29
ERCC8-206ENST00000484330 DGAT1O75907 488 aa7.01□□□□□ -1.29
ERCC8-206ENST00000484330 MDM2Q00987 491 aaPredicted RBP7.01□□□□□ -1.29
ERCC8-206ENST00000484330 NEUROD2Q15784 382 aa7.01□□□□□ -1.29
ERCC8-206ENST00000484330 TRIM67Q6ZTA4 783 aa7.01□□□□□ -1.29
ERCC8-206ENST00000484330 C3orf80F5H4A9 247 aa7□□□□□ -1.29
ERCC8-206ENST00000484330 GGCXP38435 758 aa7□□□□□ -1.29
ERCC8-206ENST00000484330 INSM1Q01101 510 aaPredicted RBP7□□□□□ -1.29
ERCC8-206ENST00000484330 PHOX2BQ99453 314 aa7□□□□□ -1.29
ERCC8-206ENST00000484330 SWT1Q5T5J6 900 aaKnown RBP6.99□□□□□ -1.29
ERCC8-206ENST00000484330 PKDCCQ504Y2 493 aa6.98□□□□□ -1.29
ERCC8-206ENST00000484330 PARP9Q8IXQ6 854 aa6.98□□□□□ -1.29
ERCC8-206ENST00000484330 APLP1P51693 650 aa6.97□□□□□ -1.29
ERCC8-206ENST00000484330 GIGYF2Q6Y7W6 1299 aaKnown RBP6.97□□□□□ -1.29
ERCC8-206ENST00000484330 DDX11L8A8MPP1 907 aa6.96□□□□□ -1.3
ERCC8-206ENST00000484330 RNF40O75150 1001 aa6.96□□□□□ -1.3
ERCC8-206ENST00000484330 SSTR3P32745 418 aaPredicted RBP6.96□□□□□ -1.3
ERCC8-206ENST00000484330 BRPF1P55201 1214 aaPredicted RBP6.96□□□□□ -1.3
ERCC8-206ENST00000484330 PRR14Q9BWN1 585 aa6.96□□□□□ -1.3
ERCC8-206ENST00000484330 KDM4CQ9H3R0 1056 aa6.96□□□□□ -1.3
ERCC8-206ENST00000484330 FAM217BQ9NTX9 383 aaPredicted RBP6.96□□□□□ -1.3
ERCC8-206ENST00000484330 SLC19A1P41440 591 aa6.95□□□□□ -1.3
ERCC8-206ENST00000484330 DIXDC1Q155Q3 683 aa6.95□□□□□ -1.3
ERCC8-206ENST00000484330 RDH13Q8NBN7 331 aa6.95□□□□□ -1.3
ERCC8-206ENST00000484330 NLRP7Q8WX94 980 aa6.95□□□□□ -1.3
ERCC8-206ENST00000484330 DDRGK1Q96HY6 314 aa6.95□□□□□ -1.3
ERCC8-206ENST00000484330 PRR20EP86478 221 aa6.94□□□□□ -1.3
ERCC8-206ENST00000484330 PRR20CP86479 221 aa6.94□□□□□ -1.3
ERCC8-206ENST00000484330 PRR20DP86480 221 aa6.94□□□□□ -1.3
ERCC8-206ENST00000484330 PRR20BP86481 221 aa6.94□□□□□ -1.3
ERCC8-206ENST00000484330 PRR20AP86496 221 aa6.94□□□□□ -1.3
ERCC8-206ENST00000484330 KMT5BQ4FZB7 885 aa6.94□□□□□ -1.3
ERCC8-206ENST00000484330 EMID1Q96A84 441 aaPredicted RBP6.94□□□□□ -1.3
ERCC8-206ENST00000484330 GPBP1L1Q9HC44 474 aaPredicted RBP6.93□□□□□ -1.3
ERCC8-206ENST00000484330 CD46P15529 392 aa6.92□□□□□ -1.3
ERCC8-206ENST00000484330 SPRYD7Q5W111 196 aa6.92□□□□□ -1.3
ERCC8-206ENST00000484330 ZNF598Q86UK7 904 aaKnown RBP6.92□□□□□ -1.3
ERCC8-206ENST00000484330 REPIN1Q9BWE0 567 aaKnown RBP6.92□□□□□ -1.3
ERCC8-206ENST00000484330 ZPR1O75312 459 aa6.91□□□□□ -1.3
ERCC8-206ENST00000484330 COPS2P61201 443 aa6.91□□□□□ -1.3
ERCC8-206ENST00000484330 GRIPAP1Q4V328 841 aa6.91□□□□□ -1.3
ERCC8-206ENST00000484330 NUTM1Q86Y26 1132 aa6.91□□□□□ -1.3
ERCC8-206ENST00000484330 BEGAINQ9BUH8 593 aa6.91□□□□□ -1.3
ERCC8-206ENST00000484330 RSPH6AQ9H0K4 717 aa6.91□□□□□ -1.3
ERCC8-206ENST00000484330 FAM181BA6NEQ2 426 aa6.9□□□□□ -1.3
ERCC8-206ENST00000484330 RNF223E7ERA6 249 aa6.9□□□□□ -1.3
ERCC8-206ENST00000484330 MS4A1P11836 297 aa6.9□□□□□ -1.3
ERCC8-206ENST00000484330 GCGRP47871 477 aa6.9□□□□□ -1.3
ERCC8-206ENST00000484330 USP46P62068 366 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms