RNA–Protein interactions for RNA: ENST00000484103.1

NDUFA3-213, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 1 (best)

Gene NDUFA3, Length 541 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-213ENST00000484103 PPP1R15AO75807 674 aaPredicted RBP29.26■■■□□ 2.27
NDUFA3-213ENST00000484103 RBM33Q96EV2 1170 aaKnown RBP29.26■■■□□ 2.27
NDUFA3-213ENST00000484103 IQGAP3Q86VI3 1631 aa29.25■■■□□ 2.27
NDUFA3-213ENST00000484103 NUTM2DQ5VT03 806 aaPredicted RBP29.25■■■□□ 2.27
NDUFA3-213ENST00000484103 RIMS2Q9UQ26 1411 aa29.2■■■□□ 2.27
NDUFA3-213ENST00000484103 TMEM131LA2VDJ0 1609 aa29.2■■■□□ 2.26
NDUFA3-213ENST00000484103 XIRP1Q702N8 1843 aaKnown RBP29.18■■■□□ 2.26
NDUFA3-213ENST00000484103 ZFYVE9O95405 1425 aa29.16■■■□□ 2.26
NDUFA3-213ENST00000484103 TMEM94Q12767 1356 aa29.15■■■□□ 2.26
NDUFA3-213ENST00000484103 RRBP1Q9P2E9 1410 aaKnown RBP29.15■■■□□ 2.26
NDUFA3-213ENST00000484103 KCNA6P17658 529 aa29.15■■■□□ 2.26
NDUFA3-213ENST00000484103 PROSER2Q86WR7 435 aaPredicted RBP29.15■■■□□ 2.26
NDUFA3-213ENST00000484103 PLEKHG1Q9ULL1 1385 aa29.11■■■□□ 2.25
NDUFA3-213ENST00000484103 HDGFP51858 240 aaKnown RBP29.1■■■□□ 2.25
NDUFA3-213ENST00000484103 MED1Q15648 1581 aaPredicted RBP29.08■■■□□ 2.25
NDUFA3-213ENST00000484103 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.06■■■□□ 2.24
NDUFA3-213ENST00000484103 NAIPQ13075 1403 aa29.05■■■□□ 2.24
NDUFA3-213ENST00000484103 SPHKAPQ2M3C7 1700 aa29.05■■■□□ 2.24
NDUFA3-213ENST00000484103 NWD1Q149M9 1564 aa29.05■■■□□ 2.24
NDUFA3-213ENST00000484103 ZNF326Q5BKZ1 582 aaKnown RBP29.04■■■□□ 2.24
NDUFA3-213ENST00000484103 TRIM52Q96A61 297 aa29.04■■■□□ 2.24
NDUFA3-213ENST00000484103 NKTRP30414 1462 aaKnown RBP29.02■■■□□ 2.24
NDUFA3-213ENST00000484103 C14orf37Q86TY3 774 aa28.99■■■□□ 2.23
NDUFA3-213ENST00000484103 PHF23Q9BUL5 403 aaPredicted RBP28.98■■■□□ 2.23
NDUFA3-213ENST00000484103 MSH6P52701 1360 aa28.98■■■□□ 2.23
NDUFA3-213ENST00000484103 CHD2O14647 1828 aaKnown RBP28.97■■■□□ 2.23
NDUFA3-213ENST00000484103 ADAMTS13Q76LX8 1427 aa28.97■■■□□ 2.23
NDUFA3-213ENST00000484103 TBX22Q9Y458 520 aa28.97■■■□□ 2.23
NDUFA3-213ENST00000484103 SOCS7O14512 581 aa28.96■■■□□ 2.23
NDUFA3-213ENST00000484103 CLTCL1P53675 1640 aa28.94■■■□□ 2.22
NDUFA3-213ENST00000484103 ROBO1Q9Y6N7 1651 aa28.93■■■□□ 2.22
NDUFA3-213ENST00000484103 HFM1A2PYH4 1435 aa28.92■■■□□ 2.22
NDUFA3-213ENST00000484103 DIP2AQ14689 1571 aa28.9■■■□□ 2.22
NDUFA3-213ENST00000484103 FAM135BQ49AJ0 1406 aa28.9■■■□□ 2.22
NDUFA3-213ENST00000484103 TRPM2O94759 1503 aa28.89■■■□□ 2.21
NDUFA3-213ENST00000484103 SLC4A1APQ9BWU0 796 aaKnown RBP28.88■■■□□ 2.21
NDUFA3-213ENST00000484103 AMOTL2Q9Y2J4 779 aa28.87■■■□□ 2.21
NDUFA3-213ENST00000484103 SLAIN2Q9P270 581 aa28.86■■■□□ 2.21
NDUFA3-213ENST00000484103 PTPRUQ92729 1446 aa28.86■■■□□ 2.21
NDUFA3-213ENST00000484103 FOXD1Q16676 465 aa28.85■■■□□ 2.21
NDUFA3-213ENST00000484103 NRXN3Q9Y4C0 1643 aa28.84■■■□□ 2.21
NDUFA3-213ENST00000484103 KIF1BO60333 1816 aa28.82■■■□□ 2.2
NDUFA3-213ENST00000484103 NEXMIFQ5QGS0 1516 aa28.81■■■□□ 2.2
NDUFA3-213ENST00000484103 PIK3R4Q99570 1358 aa28.8■■■□□ 2.2
NDUFA3-213ENST00000484103 SETBP1Q9Y6X0 1596 aa28.79■■■□□ 2.2
NDUFA3-213ENST00000484103 METP08581 1390 aa28.79■■■□□ 2.2
NDUFA3-213ENST00000484103 ATF3P18847 181 aa28.78■■■□□ 2.2
NDUFA3-213ENST00000484103 PHLPP1O60346 1717 aa28.77■■■□□ 2.2
NDUFA3-213ENST00000484103 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.77■■■□□ 2.2
NDUFA3-213ENST00000484103 C19orf44Q9H6X5 657 aa28.75■■■□□ 2.19
NDUFA3-213ENST00000484103 CADPS2Q86UW7 1296 aa28.73■■■□□ 2.19
NDUFA3-213ENST00000484103 XRN1Q8IZH2 1706 aaKnown RBP28.73■■■□□ 2.19
NDUFA3-213ENST00000484103 NCOA3Q9Y6Q9 1424 aa28.72■■■□□ 2.19
NDUFA3-213ENST00000484103 RGS17Q9UGC6 210 aaPredicted RBP28.67■■■□□ 2.18
NDUFA3-213ENST00000484103 VGFO15240 615 aaPredicted RBP28.65■■■□□ 2.18
NDUFA3-213ENST00000484103 RGL3Q3MIN7 710 aa28.65■■■□□ 2.18
NDUFA3-213ENST00000484103 MPHOSPH9Q99550 1183 aa28.65■■■□□ 2.18
NDUFA3-213ENST00000484103 COL16A1Q07092 1604 aaPredicted RBP28.63■■■□□ 2.17
NDUFA3-213ENST00000484103 JCADQ9P266 1359 aa28.62■■■□□ 2.17
NDUFA3-213ENST00000484103 CCDC144AA2RUR9 1427 aa28.61■■■□□ 2.17
NDUFA3-213ENST00000484103 BRINP3Q76B58 766 aa28.61■■■□□ 2.17
NDUFA3-213ENST00000484103 PPLO60437 1756 aa28.6■■■□□ 2.17
NDUFA3-213ENST00000484103 NALCNQ8IZF0 1738 aa28.59■■■□□ 2.17
NDUFA3-213ENST00000484103 RPGRIP1LQ68CZ1 1315 aa28.58■■■□□ 2.17
NDUFA3-213ENST00000484103 SETD1AO15047 1707 aaKnown RBP28.57■■■□□ 2.16
NDUFA3-213ENST00000484103 DCCP43146 1447 aa28.56■■■□□ 2.16
NDUFA3-213ENST00000484103 MST1RQ04912 1400 aa28.56■■■□□ 2.16
NDUFA3-213ENST00000484103 ADGRL3Q9HAR2 1447 aa28.56■■■□□ 2.16
NDUFA3-213ENST00000484103 AHDC1Q5TGY3 1603 aaPredicted RBP28.55■■■□□ 2.16
NDUFA3-213ENST00000484103 ASXL1Q8IXJ9 1541 aa28.55■■■□□ 2.16
NDUFA3-213ENST00000484103 ROBO2Q9HCK4 1378 aa28.55■■■□□ 2.16
NDUFA3-213ENST00000484103 POTEAQ6S8J7 498 aa28.55■■■□□ 2.16
NDUFA3-213ENST00000484103 DDX17Q92841 729 aaKnown RBP28.55■■■□□ 2.16
NDUFA3-213ENST00000484103 SETD5Q9C0A6 1442 aa28.54■■■□□ 2.16
NDUFA3-213ENST00000484103 ADGRF5Q8IZF2 1346 aa28.54■■■□□ 2.16
NDUFA3-213ENST00000484103 MEX3CQ5U5Q3 659 aaKnown RBP28.54■■■□□ 2.16
NDUFA3-213ENST00000484103 NUTM2BA6NNL0 878 aaPredicted RBP28.51■■■□□ 2.15
NDUFA3-213ENST00000484103 NUTM2EB1AL46 878 aaPredicted RBP28.51■■■□□ 2.15
NDUFA3-213ENST00000484103 NUTM2AQ8IVF1 878 aaPredicted RBP28.51■■■□□ 2.15
NDUFA3-213ENST00000484103 LRP6O75581 1613 aa28.51■■■□□ 2.15
NDUFA3-213ENST00000484103 STK26Q9P289 416 aa28.5■■■□□ 2.15
NDUFA3-213ENST00000484103 RAB3GAP2Q9H2M9 1393 aa28.49■■■□□ 2.15
NDUFA3-213ENST00000484103 PTCH1Q13635 1447 aa28.48■■■□□ 2.15
NDUFA3-213ENST00000484103 SPATA31E1Q6ZUB1 1445 aa28.48■■■□□ 2.15
NDUFA3-213ENST00000484103 SPATA31A6Q5VVP1 1343 aa28.45■■■□□ 2.15
NDUFA3-213ENST00000484103 SHPRHQ149N8 1683 aa28.45■■■□□ 2.14
NDUFA3-213ENST00000484103 TMEM132EQ6IEE7 984 aa28.44■■■□□ 2.14
NDUFA3-213ENST00000484103 C1orf167Q5SNV9 1468 aa28.43■■■□□ 2.14
NDUFA3-213ENST00000484103 IFT172Q9UG01 1749 aa28.43■■■□□ 2.14
NDUFA3-213ENST00000484103 NHSL1Q5SYE7 1610 aa28.43■■■□□ 2.14
NDUFA3-213ENST00000484103 ORAI2Q96SN7 254 aa28.42■■■□□ 2.14
NDUFA3-213ENST00000484103 ANKRD30BQ9BXX2 1392 aa28.4■■■□□ 2.14
NDUFA3-213ENST00000484103 WAPLQ7Z5K2 1190 aa28.39■■■□□ 2.14
NDUFA3-213ENST00000484103 NUTM2FA1L443 756 aa28.38■■■□□ 2.13
NDUFA3-213ENST00000484103 LRRC59Q96AG4 307 aaKnown RBP28.36■■■□□ 2.13
NDUFA3-213ENST00000484103 PIK3C2GO75747 1445 aa28.35■■■□□ 2.13
NDUFA3-213ENST00000484103 PLEKHH1Q9ULM0 1364 aa28.34■■■□□ 2.13
NDUFA3-213ENST00000484103 PRAG1Q86YV5 1406 aa28.33■■■□□ 2.13
NDUFA3-213ENST00000484103 ESCO1Q5FWF5 840 aa28.31■■■□□ 2.12
NDUFA3-213ENST00000484103 LRPPRCP42704 1394 aaKnown RBP28.31■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms