RNA–Protein interactions for RNA: ENST00000479525.6

ECHDC1-216, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,368 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-216ENST00000479525 NUP155O75694 1391 aa26.58■■□□□ 1.85
ECHDC1-216ENST00000479525 RBM33Q96EV2 1170 aaKnown RBP26.58■■□□□ 1.84
ECHDC1-216ENST00000479525 NUTM2DQ5VT03 806 aaPredicted RBP26.57■■□□□ 1.84
ECHDC1-216ENST00000479525 BCANQ96GW7 911 aa26.57■■□□□ 1.84
ECHDC1-216ENST00000479525 SLC52A1Q9NWF4 448 aa26.56■■□□□ 1.84
ECHDC1-216ENST00000479525 RIMS2Q9UQ26 1411 aa26.52■■□□□ 1.84
ECHDC1-216ENST00000479525 ZFYVE9O95405 1425 aa26.52■■□□□ 1.84
ECHDC1-216ENST00000479525 RRBP1Q9P2E9 1410 aaKnown RBP26.52■■□□□ 1.84
ECHDC1-216ENST00000479525 SPHKAPQ2M3C7 1700 aa26.51■■□□□ 1.83
ECHDC1-216ENST00000479525 PPP1R15AO75807 674 aaPredicted RBP26.47■■□□□ 1.83
ECHDC1-216ENST00000479525 CHD2O14647 1828 aaKnown RBP26.46■■□□□ 1.83
ECHDC1-216ENST00000479525 MED1Q15648 1581 aaPredicted RBP26.46■■□□□ 1.83
ECHDC1-216ENST00000479525 TMEM94Q12767 1356 aa26.46■■□□□ 1.83
ECHDC1-216ENST00000479525 NWD1Q149M9 1564 aa26.45■■□□□ 1.82
ECHDC1-216ENST00000479525 KCNA6P17658 529 aa26.43■■□□□ 1.82
ECHDC1-216ENST00000479525 PROSER2Q86WR7 435 aaPredicted RBP26.43■■□□□ 1.82
ECHDC1-216ENST00000479525 NAIPQ13075 1403 aa26.42■■□□□ 1.82
ECHDC1-216ENST00000479525 PLEKHG1Q9ULL1 1385 aa26.41■■□□□ 1.82
ECHDC1-216ENST00000479525 CLTCL1P53675 1640 aa26.39■■□□□ 1.81
ECHDC1-216ENST00000479525 ROBO1Q9Y6N7 1651 aa26.36■■□□□ 1.81
ECHDC1-216ENST00000479525 NKTRP30414 1462 aaKnown RBP26.35■■□□□ 1.81
ECHDC1-216ENST00000479525 ADAMTS13Q76LX8 1427 aa26.35■■□□□ 1.81
ECHDC1-216ENST00000479525 TRIM52Q96A61 297 aa26.33■■□□□ 1.8
ECHDC1-216ENST00000479525 NRXN3Q9Y4C0 1643 aa26.32■■□□□ 1.8
ECHDC1-216ENST00000479525 KIF1BO60333 1816 aa26.31■■□□□ 1.8
ECHDC1-216ENST00000479525 HDGFP51858 240 aaKnown RBP26.31■■□□□ 1.8
ECHDC1-216ENST00000479525 ZNF326Q5BKZ1 582 aaKnown RBP26.31■■□□□ 1.8
ECHDC1-216ENST00000479525 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.31■■□□□ 1.8
ECHDC1-216ENST00000479525 TRPM2O94759 1503 aa26.27■■□□□ 1.8
ECHDC1-216ENST00000479525 DIP2AQ14689 1571 aa26.27■■□□□ 1.8
ECHDC1-216ENST00000479525 TBX22Q9Y458 520 aa26.27■■□□□ 1.8
ECHDC1-216ENST00000479525 MSH6P52701 1360 aa26.26■■□□□ 1.79
ECHDC1-216ENST00000479525 HFM1A2PYH4 1435 aa26.26■■□□□ 1.79
ECHDC1-216ENST00000479525 PTPRUQ92729 1446 aa26.26■■□□□ 1.79
ECHDC1-216ENST00000479525 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.24■■□□□ 1.79
ECHDC1-216ENST00000479525 SOCS7O14512 581 aa26.24■■□□□ 1.79
ECHDC1-216ENST00000479525 NEXMIFQ5QGS0 1516 aa26.23■■□□□ 1.79
ECHDC1-216ENST00000479525 FOXD1Q16676 465 aa26.22■■□□□ 1.79
ECHDC1-216ENST00000479525 C14orf37Q86TY3 774 aa26.22■■□□□ 1.79
ECHDC1-216ENST00000479525 FAM135BQ49AJ0 1406 aa26.22■■□□□ 1.79
ECHDC1-216ENST00000479525 PHLPP1O60346 1717 aa26.22■■□□□ 1.79
ECHDC1-216ENST00000479525 PHF23Q9BUL5 403 aaPredicted RBP26.21■■□□□ 1.79
ECHDC1-216ENST00000479525 SETBP1Q9Y6X0 1596 aa26.2■■□□□ 1.78
ECHDC1-216ENST00000479525 XRN1Q8IZH2 1706 aaKnown RBP26.19■■□□□ 1.78
ECHDC1-216ENST00000479525 SLC4A1APQ9BWU0 796 aaKnown RBP26.19■■□□□ 1.78
ECHDC1-216ENST00000479525 AMOTL2Q9Y2J4 779 aa26.19■■□□□ 1.78
ECHDC1-216ENST00000479525 SLAIN2Q9P270 581 aa26.16■■□□□ 1.78
ECHDC1-216ENST00000479525 METP08581 1390 aa26.15■■□□□ 1.78
ECHDC1-216ENST00000479525 PPLO60437 1756 aa26.12■■□□□ 1.77
ECHDC1-216ENST00000479525 PIK3R4Q99570 1358 aa26.12■■□□□ 1.77
ECHDC1-216ENST00000479525 SETD1AO15047 1707 aaKnown RBP26.12■■□□□ 1.77
ECHDC1-216ENST00000479525 NALCNQ8IZF0 1738 aa26.09■■□□□ 1.77
ECHDC1-216ENST00000479525 COL16A1Q07092 1604 aaPredicted RBP26.08■■□□□ 1.77
ECHDC1-216ENST00000479525 ATF3P18847 181 aa26.06■■□□□ 1.76
ECHDC1-216ENST00000479525 RGS17Q9UGC6 210 aaPredicted RBP26.06■■□□□ 1.76
ECHDC1-216ENST00000479525 C19orf44Q9H6X5 657 aa26.05■■□□□ 1.76
ECHDC1-216ENST00000479525 NCOA3Q9Y6Q9 1424 aa26.04■■□□□ 1.76
ECHDC1-216ENST00000479525 CADPS2Q86UW7 1296 aa26.01■■□□□ 1.75
ECHDC1-216ENST00000479525 RGL3Q3MIN7 710 aa26■■□□□ 1.75
ECHDC1-216ENST00000479525 MPHOSPH9Q99550 1183 aa25.99■■□□□ 1.75
ECHDC1-216ENST00000479525 IFT172Q9UG01 1749 aa25.99■■□□□ 1.75
ECHDC1-216ENST00000479525 AHDC1Q5TGY3 1603 aaPredicted RBP25.98■■□□□ 1.75
ECHDC1-216ENST00000479525 BRINP3Q76B58 766 aa25.96■■□□□ 1.75
ECHDC1-216ENST00000479525 CCDC144AA2RUR9 1427 aa25.96■■□□□ 1.75
ECHDC1-216ENST00000479525 VGFO15240 615 aaPredicted RBP25.95■■□□□ 1.75
ECHDC1-216ENST00000479525 DDX17Q92841 729 aaKnown RBP25.95■■□□□ 1.75
ECHDC1-216ENST00000479525 MST1RQ04912 1400 aa25.95■■□□□ 1.75
ECHDC1-216ENST00000479525 JCADQ9P266 1359 aa25.95■■□□□ 1.74
ECHDC1-216ENST00000479525 ASXL1Q8IXJ9 1541 aa25.95■■□□□ 1.74
ECHDC1-216ENST00000479525 LRP6O75581 1613 aa25.94■■□□□ 1.74
ECHDC1-216ENST00000479525 ADGRL3Q9HAR2 1447 aa25.94■■□□□ 1.74
ECHDC1-216ENST00000479525 ROBO2Q9HCK4 1378 aa25.93■■□□□ 1.74
ECHDC1-216ENST00000479525 ADGRF5Q8IZF2 1346 aa25.93■■□□□ 1.74
ECHDC1-216ENST00000479525 SETD5Q9C0A6 1442 aa25.93■■□□□ 1.74
ECHDC1-216ENST00000479525 POTEAQ6S8J7 498 aa25.93■■□□□ 1.74
ECHDC1-216ENST00000479525 NHSL1Q5SYE7 1610 aa25.92■■□□□ 1.74
ECHDC1-216ENST00000479525 SHPRHQ149N8 1683 aa25.92■■□□□ 1.74
ECHDC1-216ENST00000479525 DCCP43146 1447 aa25.91■■□□□ 1.74
ECHDC1-216ENST00000479525 RPGRIP1LQ68CZ1 1315 aa25.9■■□□□ 1.74
ECHDC1-216ENST00000479525 SPATA31E1Q6ZUB1 1445 aa25.89■■□□□ 1.74
ECHDC1-216ENST00000479525 RAB3GAP2Q9H2M9 1393 aa25.88■■□□□ 1.73
ECHDC1-216ENST00000479525 PTCH1Q13635 1447 aa25.86■■□□□ 1.73
ECHDC1-216ENST00000479525 NUTM2BA6NNL0 878 aaPredicted RBP25.85■■□□□ 1.73
ECHDC1-216ENST00000479525 NUTM2EB1AL46 878 aaPredicted RBP25.85■■□□□ 1.73
ECHDC1-216ENST00000479525 NUTM2AQ8IVF1 878 aaPredicted RBP25.85■■□□□ 1.73
ECHDC1-216ENST00000479525 STK26Q9P289 416 aa25.85■■□□□ 1.73
ECHDC1-216ENST00000479525 TMEM132EQ6IEE7 984 aa25.83■■□□□ 1.73
ECHDC1-216ENST00000479525 MEX3CQ5U5Q3 659 aaKnown RBP25.82■■□□□ 1.72
ECHDC1-216ENST00000479525 C1orf167Q5SNV9 1468 aa25.82■■□□□ 1.72
ECHDC1-216ENST00000479525 ORAI2Q96SN7 254 aa25.8■■□□□ 1.72
ECHDC1-216ENST00000479525 WAPLQ7Z5K2 1190 aa25.78■■□□□ 1.72
ECHDC1-216ENST00000479525 PLEKHH1Q9ULM0 1364 aa25.77■■□□□ 1.72
ECHDC1-216ENST00000479525 SPATA31A6Q5VVP1 1343 aa25.77■■□□□ 1.72
ECHDC1-216ENST00000479525 KNDC1Q76NI1 1749 aa25.76■■□□□ 1.71
ECHDC1-216ENST00000479525 PIK3C2GO75747 1445 aa25.76■■□□□ 1.71
ECHDC1-216ENST00000479525 NUTM2FA1L443 756 aa25.76■■□□□ 1.71
ECHDC1-216ENST00000479525 ANKRD30BQ9BXX2 1392 aa25.75■■□□□ 1.71
ECHDC1-216ENST00000479525 PRAG1Q86YV5 1406 aa25.74■■□□□ 1.71
ECHDC1-216ENST00000479525 RGPD8O14715 1765 aaPredicted RBP25.71■■□□□ 1.71
ECHDC1-216ENST00000479525 CDC42BPGQ6DT37 1551 aa25.71■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms