RNA–Protein interactions for RNA: ENST00000478640.6

CCT3-212, Transcript of chaperonin containing TCP1 subunit 3, humanhuman

TSL 2

Gene CCT3, Length 583 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT3-212ENST00000478640 ZNF326Q5BKZ1 582 aaKnown RBP17.05■□□□□ 0.32
CCT3-212ENST00000478640 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.05■□□□□ 0.32
CCT3-212ENST00000478640 C14orf37Q86TY3 774 aa17.03■□□□□ 0.32
CCT3-212ENST00000478640 SYNMO15061 1565 aa17.02■□□□□ 0.32
CCT3-212ENST00000478640 RPRD2Q5VT52 1461 aaKnown RBP17.02■□□□□ 0.32
CCT3-212ENST00000478640 TMEM94Q12767 1356 aa17.02■□□□□ 0.31
CCT3-212ENST00000478640 RIMS2Q9UQ26 1411 aa17.01■□□□□ 0.31
CCT3-212ENST00000478640 TBX22Q9Y458 520 aa16.98■□□□□ 0.31
CCT3-212ENST00000478640 ADGRB3O60242 1522 aa16.97■□□□□ 0.31
CCT3-212ENST00000478640 PLEKHG1Q9ULL1 1385 aa16.96■□□□□ 0.31
CCT3-212ENST00000478640 SLC4A1APQ9BWU0 796 aaKnown RBP16.95■□□□□ 0.3
CCT3-212ENST00000478640 SOCS7O14512 581 aa16.94■□□□□ 0.3
CCT3-212ENST00000478640 SLAIN2Q9P270 581 aa16.94■□□□□ 0.3
CCT3-212ENST00000478640 RRBP1Q9P2E9 1410 aaKnown RBP16.94■□□□□ 0.3
CCT3-212ENST00000478640 TET3O43151 1660 aa16.94■□□□□ 0.3
CCT3-212ENST00000478640 UNC13BO14795 1591 aa16.93■□□□□ 0.3
CCT3-212ENST00000478640 STRCP1A6NGW2 1772 aa16.92■□□□□ 0.3
CCT3-212ENST00000478640 MSH5O43196 834 aa16.92■□□□□ 0.3
CCT3-212ENST00000478640 AMOTL2Q9Y2J4 779 aa16.92■□□□□ 0.3
CCT3-212ENST00000478640 ZFYVE9O95405 1425 aa16.92■□□□□ 0.3
CCT3-212ENST00000478640 MSH6P52701 1360 aa16.91■□□□□ 0.3
CCT3-212ENST00000478640 NAIPQ13075 1403 aa16.9■□□□□ 0.3
CCT3-212ENST00000478640 ATF3P18847 181 aa16.9■□□□□ 0.3
CCT3-212ENST00000478640 TMEM131LA2VDJ0 1609 aa16.88■□□□□ 0.29
CCT3-212ENST00000478640 E9PCH4 1651 aa16.88■□□□□ 0.29
CCT3-212ENST00000478640 C19orf44Q9H6X5 657 aa16.87■□□□□ 0.29
CCT3-212ENST00000478640 IQGAP3Q86VI3 1631 aa16.87■□□□□ 0.29
CCT3-212ENST00000478640 ALKQ9UM73 1620 aa16.87■□□□□ 0.29
CCT3-212ENST00000478640 KDM5AP29375 1690 aaKnown RBP16.87■□□□□ 0.29
CCT3-212ENST00000478640 FAM135BQ49AJ0 1406 aa16.86■□□□□ 0.29
CCT3-212ENST00000478640 GCC2Q8IWJ2 1684 aa16.85■□□□□ 0.29
CCT3-212ENST00000478640 VGFO15240 615 aaPredicted RBP16.83■□□□□ 0.28
CCT3-212ENST00000478640 RGL3Q3MIN7 710 aa16.83■□□□□ 0.28
CCT3-212ENST00000478640 ADAMTS13Q76LX8 1427 aa16.83■□□□□ 0.28
CCT3-212ENST00000478640 CADPS2Q86UW7 1296 aa16.83■□□□□ 0.28
CCT3-212ENST00000478640 HFM1A2PYH4 1435 aa16.82■□□□□ 0.28
CCT3-212ENST00000478640 NKTRP30414 1462 aaKnown RBP16.81■□□□□ 0.28
CCT3-212ENST00000478640 MPHOSPH9Q99550 1183 aa16.81■□□□□ 0.28
CCT3-212ENST00000478640 METP08581 1390 aa16.79■□□□□ 0.28
CCT3-212ENST00000478640 PIK3R4Q99570 1358 aa16.79■□□□□ 0.28
CCT3-212ENST00000478640 MED1Q15648 1581 aaPredicted RBP16.79■□□□□ 0.28
CCT3-212ENST00000478640 PTPRUQ92729 1446 aa16.77■□□□□ 0.27
CCT3-212ENST00000478640 MYO5BQ9ULV0 1848 aa16.77■□□□□ 0.27
CCT3-212ENST00000478640 RPGRIP1LQ68CZ1 1315 aa16.75■□□□□ 0.27
CCT3-212ENST00000478640 MEX3CQ5U5Q3 659 aaKnown RBP16.75■□□□□ 0.27
CCT3-212ENST00000478640 NCOA3Q9Y6Q9 1424 aa16.75■□□□□ 0.27
CCT3-212ENST00000478640 NWD1Q149M9 1564 aa16.74■□□□□ 0.27
CCT3-212ENST00000478640 STK26Q9P289 416 aa16.74■□□□□ 0.27
CCT3-212ENST00000478640 RGS17Q9UGC6 210 aaPredicted RBP16.74■□□□□ 0.27
CCT3-212ENST00000478640 TRPM2O94759 1503 aa16.74■□□□□ 0.27
CCT3-212ENST00000478640 XIRP1Q702N8 1843 aaKnown RBP16.73■□□□□ 0.27
CCT3-212ENST00000478640 NUTM2BA6NNL0 878 aaPredicted RBP16.73■□□□□ 0.27
CCT3-212ENST00000478640 NUTM2EB1AL46 878 aaPredicted RBP16.73■□□□□ 0.27
CCT3-212ENST00000478640 NUTM2AQ8IVF1 878 aaPredicted RBP16.73■□□□□ 0.27
CCT3-212ENST00000478640 BRINP3Q76B58 766 aa16.72■□□□□ 0.27
CCT3-212ENST00000478640 ROBO1Q9Y6N7 1651 aa16.71■□□□□ 0.27
CCT3-212ENST00000478640 CLTCL1P53675 1640 aa16.7■□□□□ 0.26
CCT3-212ENST00000478640 SPHKAPQ2M3C7 1700 aa16.7■□□□□ 0.26
CCT3-212ENST00000478640 JCADQ9P266 1359 aa16.7■□□□□ 0.26
CCT3-212ENST00000478640 DDX17Q92841 729 aaKnown RBP16.7■□□□□ 0.26
CCT3-212ENST00000478640 CCDC144AA2RUR9 1427 aa16.7■□□□□ 0.26
CCT3-212ENST00000478640 DIP2AQ14689 1571 aa16.69■□□□□ 0.26
CCT3-212ENST00000478640 CHD2O14647 1828 aaKnown RBP16.69■□□□□ 0.26
CCT3-212ENST00000478640 POTEAQ6S8J7 498 aa16.69■□□□□ 0.26
CCT3-212ENST00000478640 SETD5Q9C0A6 1442 aa16.68■□□□□ 0.26
CCT3-212ENST00000478640 ADGRF5Q8IZF2 1346 aa16.68■□□□□ 0.26
CCT3-212ENST00000478640 TMEM132EQ6IEE7 984 aa16.67■□□□□ 0.26
CCT3-212ENST00000478640 NEXMIFQ5QGS0 1516 aa16.65■□□□□ 0.26
CCT3-212ENST00000478640 SETBP1Q9Y6X0 1596 aa16.65■□□□□ 0.26
CCT3-212ENST00000478640 LRRC59Q96AG4 307 aaKnown RBP16.65■□□□□ 0.26
CCT3-212ENST00000478640 ACIN1Q9UKV3 1341 aaKnown RBP16.65■□□□□ 0.26
CCT3-212ENST00000478640 ROBO2Q9HCK4 1378 aa16.64■□□□□ 0.26
CCT3-212ENST00000478640 NUTM2FA1L443 756 aa16.64■□□□□ 0.25
CCT3-212ENST00000478640 WAPLQ7Z5K2 1190 aa16.64■□□□□ 0.25
CCT3-212ENST00000478640 ORAI2Q96SN7 254 aa16.64■□□□□ 0.25
CCT3-212ENST00000478640 SPATA31A6Q5VVP1 1343 aa16.64■□□□□ 0.25
CCT3-212ENST00000478640 ESCO1Q5FWF5 840 aa16.62■□□□□ 0.25
CCT3-212ENST00000478640 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.62■□□□□ 0.25
CCT3-212ENST00000478640 KDM2AQ9Y2K7 1162 aa16.61■□□□□ 0.25
CCT3-212ENST00000478640 PHLPP1O60346 1717 aa16.61■□□□□ 0.25
CCT3-212ENST00000478640 RAB3GAP2Q9H2M9 1393 aa16.61■□□□□ 0.25
CCT3-212ENST00000478640 NRXN3Q9Y4C0 1643 aa16.6■□□□□ 0.25
CCT3-212ENST00000478640 ANKRD30BQ9BXX2 1392 aa16.6■□□□□ 0.25
CCT3-212ENST00000478640 MST1RQ04912 1400 aa16.6■□□□□ 0.25
CCT3-212ENST00000478640 ADGRL3Q9HAR2 1447 aa16.6■□□□□ 0.25
CCT3-212ENST00000478640 ZNF772Q68DY9 489 aaPredicted RBP16.59■□□□□ 0.25
CCT3-212ENST00000478640 DCCP43146 1447 aa16.59■□□□□ 0.25
CCT3-212ENST00000478640 KIF1BO60333 1816 aa16.59■□□□□ 0.25
CCT3-212ENST00000478640 ADAMTS2O95450 1211 aa16.58■□□□□ 0.24
CCT3-212ENST00000478640 CFAP70Q5T0N1 1121 aa16.58■□□□□ 0.24
CCT3-212ENST00000478640 C8orf37Q96NL8 207 aa16.58■□□□□ 0.24
CCT3-212ENST00000478640 SAFB2Q14151 953 aaKnown RBP eCLIP16.57■□□□□ 0.24
CCT3-212ENST00000478640 XPCQ01831 940 aaPredicted RBP16.56■□□□□ 0.24
CCT3-212ENST00000478640 SPATA31E1Q6ZUB1 1445 aa16.55■□□□□ 0.24
CCT3-212ENST00000478640 FOXO3O43524 673 aa16.55■□□□□ 0.24
CCT3-212ENST00000478640 NGLY1Q96IV0 654 aa16.55■□□□□ 0.24
CCT3-212ENST00000478640 C14orf93Q9H972 538 aaKnown RBP16.55■□□□□ 0.24
CCT3-212ENST00000478640 ASXL1Q8IXJ9 1541 aa16.55■□□□□ 0.24
CCT3-212ENST00000478640 C1orf167Q5SNV9 1468 aa16.54■□□□□ 0.24
CCT3-212ENST00000478640 XRN1Q8IZH2 1706 aaKnown RBP16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms