RNA–Protein interactions for RNA: ENST00000478404.1

RNF149-204, Transcript of ring finger protein 149, humanhuman

TSL 2

Gene RNF149, Length 997 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF149-204ENST00000478404 TIMELESSQ9UNS1 1208 aa10.6□□□□□ -0.71
RNF149-204ENST00000478404 IL27Q8NEV9 243 aa10.59□□□□□ -0.71
RNF149-204ENST00000478404 FAM98CQ17RN3 349 aaKnown RBP10.58□□□□□ -0.72
RNF149-204ENST00000478404 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.58□□□□□ -0.72
RNF149-204ENST00000478404 HPS5Q9UPZ3 1129 aa10.58□□□□□ -0.72
RNF149-204ENST00000478404 TJAP1Q5JTD0 557 aa10.57□□□□□ -0.72
RNF149-204ENST00000478404 CERKQ8TCT0 537 aa10.57□□□□□ -0.72
RNF149-204ENST00000478404 FAM117AQ9C073 453 aa10.57□□□□□ -0.72
RNF149-204ENST00000478404 DAXXQ9UER7 740 aaPredicted RBP10.57□□□□□ -0.72
RNF149-204ENST00000478404 SEPT9Q9UHD8 586 aaPredicted RBP10.57□□□□□ -0.72
RNF149-204ENST00000478404 TTC13Q8NBP0 860 aa10.56□□□□□ -0.72
RNF149-204ENST00000478404 LRCH3Q96II8 777 aa10.55□□□□□ -0.72
RNF149-204ENST00000478404 PHOX2BQ99453 314 aa10.55□□□□□ -0.72
RNF149-204ENST00000478404 TMUB1Q9BVT8 246 aa10.55□□□□□ -0.72
RNF149-204ENST00000478404 REPIN1Q9BWE0 567 aaKnown RBP10.55□□□□□ -0.72
RNF149-204ENST00000478404 PLEKHG3A1L390 1219 aa10.54□□□□□ -0.72
RNF149-204ENST00000478404 PPP1R18Q6NYC8 613 aa10.54□□□□□ -0.72
RNF149-204ENST00000478404 PADI6Q6TGC4 694 aa10.54□□□□□ -0.72
RNF149-204ENST00000478404 RBM27Q9P2N5 1060 aaKnown RBP10.54□□□□□ -0.72
RNF149-204ENST00000478404 TTLL12Q14166 644 aaPredicted RBP10.53□□□□□ -0.72
RNF149-204ENST00000478404 PDZRN3Q9UPQ7 1066 aa10.53□□□□□ -0.72
RNF149-204ENST00000478404 TRIM6-TRIM34B2RNG4 842 aa10.52□□□□□ -0.73
RNF149-204ENST00000478404 FAM161AQ3B820 660 aa10.52□□□□□ -0.73
RNF149-204ENST00000478404 GIGYF2Q6Y7W6 1299 aaKnown RBP10.52□□□□□ -0.73
RNF149-204ENST00000478404 METTL3Q86U44 580 aaKnown RBP10.51□□□□□ -0.73
RNF149-204ENST00000478404 DDRGK1Q96HY6 314 aa10.51□□□□□ -0.73
RNF149-204ENST00000478404 ADGRG1Q9Y653 693 aa10.51□□□□□ -0.73
RNF149-204ENST00000478404 MS4A1P11836 297 aa10.5□□□□□ -0.73
RNF149-204ENST00000478404 PRSS12P56730 875 aa10.5□□□□□ -0.73
RNF149-204ENST00000478404 PXYLP1Q8TE99 480 aa10.49□□□□□ -0.73
RNF149-204ENST00000478404 OATP04181 439 aa10.48□□□□□ -0.73
RNF149-204ENST00000478404 CLCN1P35523 988 aa10.48□□□□□ -0.73
RNF149-204ENST00000478404 ERICH6Q7L0X2 663 aa10.48□□□□□ -0.73
RNF149-204ENST00000478404 CDCA7LQ96GN5 454 aa10.48□□□□□ -0.73
RNF149-204ENST00000478404 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.48□□□□□ -0.73
RNF149-204ENST00000478404 PPP4CP60510 307 aa10.47□□□□□ -0.73
RNF149-204ENST00000478404 MDM2Q00987 491 aaPredicted RBP10.47□□□□□ -0.73
RNF149-204ENST00000478404 IL21Q9HBE4 155 aa10.47□□□□□ -0.73
RNF149-204ENST00000478404 GPCPD1Q9NPB8 672 aa10.47□□□□□ -0.73
RNF149-204ENST00000478404 FAM198AQ9UFP1 575 aa10.47□□□□□ -0.73
RNF149-204ENST00000478404 NLRP7Q8WX94 980 aa10.44□□□□□ -0.74
RNF149-204ENST00000478404 MTRQ99707 1265 aa10.44□□□□□ -0.74
RNF149-204ENST00000478404 TSKSQ9UJT2 592 aa10.43□□□□□ -0.74
RNF149-204ENST00000478404 GOPCQ9HD26 462 aa10.42□□□□□ -0.74
RNF149-204ENST00000478404 FAM217BQ9NTX9 383 aaPredicted RBP10.42□□□□□ -0.74
RNF149-204ENST00000478404 SSTR3P32745 418 aaPredicted RBP10.41□□□□□ -0.74
RNF149-204ENST00000478404 LCE2AQ5TA79 106 aaPredicted RBP10.41□□□□□ -0.74
RNF149-204ENST00000478404 C14orf37Q86TY3 774 aa10.41□□□□□ -0.74
RNF149-204ENST00000478404 C3orf80F5H4A9 247 aa10.4□□□□□ -0.74
RNF149-204ENST00000478404 RBM46Q8TBY0 533 aaKnown RBP10.4□□□□□ -0.74
RNF149-204ENST00000478404 EYA1Q99502 592 aa10.4□□□□□ -0.74
RNF149-204ENST00000478404 ZNF516Q92618 1163 aa10.39□□□□□ -0.75
RNF149-204ENST00000478404 PACS2Q86VP3 889 aa10.38□□□□□ -0.75
RNF149-204ENST00000478404 MYT1Q01538 1121 aa10.37□□□□□ -0.75
RNF149-204ENST00000478404 TREML4Q6UXN2 200 aa10.37□□□□□ -0.75
RNF149-204ENST00000478404 TRIM67Q6ZTA4 783 aa10.37□□□□□ -0.75
RNF149-204ENST00000478404 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.36□□□□□ -0.75
RNF149-204ENST00000478404 POTECB2RU33 542 aa10.36□□□□□ -0.75
RNF149-204ENST00000478404 RCCD1A6NED2 376 aa10.35□□□□□ -0.75
RNF149-204ENST00000478404 SH3D19Q5HYK7 790 aa10.35□□□□□ -0.75
RNF149-204ENST00000478404 NUDT18Q6ZVK8 323 aa10.35□□□□□ -0.75
RNF149-204ENST00000478404 SAMD7Q7Z3H4 446 aa10.35□□□□□ -0.75
RNF149-204ENST00000478404 BEGAINQ9BUH8 593 aa10.35□□□□□ -0.75
RNF149-204ENST00000478404 DGAT1O75907 488 aa10.34□□□□□ -0.75
RNF149-204ENST00000478404 TATDN2Q93075 761 aa10.34□□□□□ -0.75
RNF149-204ENST00000478404 NBPF26B4DH59 902 aa10.33□□□□□ -0.76
RNF149-204ENST00000478404 NKX2-3Q8TAU0 364 aa10.33□□□□□ -0.76
RNF149-204ENST00000478404 GGCXP38435 758 aa10.32□□□□□ -0.76
RNF149-204ENST00000478404 PNMA3Q9UL41 463 aa10.32□□□□□ -0.76
RNF149-204ENST00000478404 DNAJB2P25686 324 aa10.3□□□□□ -0.76
RNF149-204ENST00000478404 SKIV2LQ15477 1246 aaKnown RBP10.3□□□□□ -0.76
RNF149-204ENST00000478404 PKDCCQ504Y2 493 aa10.3□□□□□ -0.76
RNF149-204ENST00000478404 TMEM134Q9H6X4 195 aa10.3□□□□□ -0.76
RNF149-204ENST00000478404 PCMTD1Q96MG8 357 aaPredicted RBP10.29□□□□□ -0.76
RNF149-204ENST00000478404 RSPH6AQ9H0K4 717 aa10.29□□□□□ -0.76
RNF149-204ENST00000478404 SMAPO00193 183 aa10.28□□□□□ -0.76
RNF149-204ENST00000478404 CD46P15529 392 aa10.28□□□□□ -0.76
RNF149-204ENST00000478404 APLP1P51693 650 aa10.27□□□□□ -0.77
RNF149-204ENST00000478404 PRR20EP86478 221 aa10.27□□□□□ -0.77
RNF149-204ENST00000478404 PRR20CP86479 221 aa10.27□□□□□ -0.77
RNF149-204ENST00000478404 PRR20DP86480 221 aa10.27□□□□□ -0.77
RNF149-204ENST00000478404 PRR20BP86481 221 aa10.27□□□□□ -0.77
RNF149-204ENST00000478404 PRR20AP86496 221 aa10.27□□□□□ -0.77
RNF149-204ENST00000478404 MYSM1Q5VVJ2 828 aa10.27□□□□□ -0.77
RNF149-204ENST00000478404 TBC1D2Q9BYX2 928 aa10.25□□□□□ -0.77
RNF149-204ENST00000478404 SULF1Q8IWU6 871 aa10.24□□□□□ -0.77
RNF149-204ENST00000478404 PROCA1Q8NCQ7 364 aaPredicted RBP10.24□□□□□ -0.77
RNF149-204ENST00000478404 EMID1Q96A84 441 aaPredicted RBP10.24□□□□□ -0.77
RNF149-204ENST00000478404 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.24□□□□□ -0.77
RNF149-204ENST00000478404 DDX11L8A8MPP1 907 aa10.23□□□□□ -0.77
RNF149-204ENST00000478404 SLC19A1P41440 591 aa10.23□□□□□ -0.77
RNF149-204ENST00000478404 POLR3EQ9NVU0 708 aa10.23□□□□□ -0.77
RNF149-204ENST00000478404 DIXDC1Q155Q3 683 aa10.22□□□□□ -0.77
RNF149-204ENST00000478404 SPRYD7Q5W111 196 aa10.22□□□□□ -0.77
RNF149-204ENST00000478404 SPIRE2Q8WWL2 714 aa10.22□□□□□ -0.77
RNF149-204ENST00000478404 STK17AQ9UEE5 414 aa10.22□□□□□ -0.77
RNF149-204ENST00000478404 CLK2P49760 499 aaKnown RBP10.21□□□□□ -0.77
RNF149-204ENST00000478404 ZNF598Q86UK7 904 aaKnown RBP10.21□□□□□ -0.77
RNF149-204ENST00000478404 FLIIQ13045 1269 aa10.19□□□□□ -0.78
RNF149-204ENST00000478404 ZMYND15Q9H091 742 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms