RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 PPP1R15AO75807 674 aaPredicted RBP10.42□□□□□ -0.74
RTFDC1-206ENST00000477485 IDI1Q13907 227 aa10.42□□□□□ -0.74
RTFDC1-206ENST00000477485 RGS17Q9UGC6 210 aaPredicted RBP10.42□□□□□ -0.74
RTFDC1-206ENST00000477485 NKTRP30414 1462 aaKnown RBP10.42□□□□□ -0.74
RTFDC1-206ENST00000477485 KCNA6P17658 529 aa10.41□□□□□ -0.74
RTFDC1-206ENST00000477485 CHGAP10645 457 aaKnown RBP10.4□□□□□ -0.74
RTFDC1-206ENST00000477485 FAM50AQ14320 339 aaKnown RBP10.4□□□□□ -0.74
RTFDC1-206ENST00000477485 C14orf37Q86TY3 774 aa10.4□□□□□ -0.74
RTFDC1-206ENST00000477485 POTEAQ6S8J7 498 aa10.39□□□□□ -0.75
RTFDC1-206ENST00000477485 TMEM131LA2VDJ0 1609 aa10.38□□□□□ -0.75
RTFDC1-206ENST00000477485 NOS1P29475 1434 aa10.38□□□□□ -0.75
RTFDC1-206ENST00000477485 MEX3CQ5U5Q3 659 aaKnown RBP10.37□□□□□ -0.75
RTFDC1-206ENST00000477485 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.37□□□□□ -0.75
RTFDC1-206ENST00000477485 RIMS2Q9UQ26 1411 aa10.37□□□□□ -0.75
RTFDC1-206ENST00000477485 E9PCH4 1651 aa10.37□□□□□ -0.75
RTFDC1-206ENST00000477485 COL16A1Q07092 1604 aaPredicted RBP10.36□□□□□ -0.75
RTFDC1-206ENST00000477485 NUTM2DQ5VT03 806 aaPredicted RBP10.36□□□□□ -0.75
RTFDC1-206ENST00000477485 SLC52A1Q9NWF4 448 aa10.36□□□□□ -0.75
RTFDC1-206ENST00000477485 SLAIN2Q9P270 581 aa10.36□□□□□ -0.75
RTFDC1-206ENST00000477485 JCADQ9P266 1359 aa10.36□□□□□ -0.75
RTFDC1-206ENST00000477485 ADGRL2O95490 1459 aa10.36□□□□□ -0.75
RTFDC1-206ENST00000477485 RPRD2Q5VT52 1461 aaKnown RBP10.36□□□□□ -0.75
RTFDC1-206ENST00000477485 UNC13BO14795 1591 aa10.35□□□□□ -0.75
RTFDC1-206ENST00000477485 ANKRD50Q9ULJ7 1429 aa10.35□□□□□ -0.75
RTFDC1-206ENST00000477485 HDGFP51858 240 aaKnown RBP10.35□□□□□ -0.75
RTFDC1-206ENST00000477485 PLEKHG1Q9ULL1 1385 aa10.35□□□□□ -0.75
RTFDC1-206ENST00000477485 SHPRHQ149N8 1683 aa10.34□□□□□ -0.75
RTFDC1-206ENST00000477485 ZFYVE9O95405 1425 aa10.33□□□□□ -0.76
RTFDC1-206ENST00000477485 TRIM52Q96A61 297 aa10.33□□□□□ -0.76
RTFDC1-206ENST00000477485 DIP2AQ14689 1571 aa10.33□□□□□ -0.76
RTFDC1-206ENST00000477485 ATF3P18847 181 aa10.32□□□□□ -0.76
RTFDC1-206ENST00000477485 LRP6O75581 1613 aa10.32□□□□□ -0.76
RTFDC1-206ENST00000477485 IQGAP3Q86VI3 1631 aa10.32□□□□□ -0.76
RTFDC1-206ENST00000477485 TRPM2O94759 1503 aa10.32□□□□□ -0.76
RTFDC1-206ENST00000477485 SPHKAPQ2M3C7 1700 aa10.31□□□□□ -0.76
RTFDC1-206ENST00000477485 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.31□□□□□ -0.76
RTFDC1-206ENST00000477485 AHDC1Q5TGY3 1603 aaPredicted RBP10.3□□□□□ -0.76
RTFDC1-206ENST00000477485 NUTM2BA6NNL0 878 aaPredicted RBP10.3□□□□□ -0.76
RTFDC1-206ENST00000477485 NUTM2EB1AL46 878 aaPredicted RBP10.3□□□□□ -0.76
RTFDC1-206ENST00000477485 NUTM2AQ8IVF1 878 aaPredicted RBP10.3□□□□□ -0.76
RTFDC1-206ENST00000477485 ITGAEP38570 1179 aa10.29□□□□□ -0.76
RTFDC1-206ENST00000477485 CADPS2Q86UW7 1296 aa10.29□□□□□ -0.76
RTFDC1-206ENST00000477485 SPATA31A6Q5VVP1 1343 aa10.29□□□□□ -0.76
RTFDC1-206ENST00000477485 ADAMTS13Q76LX8 1427 aa10.28□□□□□ -0.76
RTFDC1-206ENST00000477485 ZNF772Q68DY9 489 aaPredicted RBP10.28□□□□□ -0.76
RTFDC1-206ENST00000477485 TBX22Q9Y458 520 aa10.28□□□□□ -0.76
RTFDC1-206ENST00000477485 NHSL1Q5SYE7 1610 aa10.27□□□□□ -0.77
RTFDC1-206ENST00000477485 C19orf44Q9H6X5 657 aa10.27□□□□□ -0.77
RTFDC1-206ENST00000477485 KIF1BO60333 1816 aa10.27□□□□□ -0.77
RTFDC1-206ENST00000477485 XRN1Q8IZH2 1706 aaKnown RBP10.27□□□□□ -0.77
RTFDC1-206ENST00000477485 NRXN3Q9Y4C0 1643 aa10.26□□□□□ -0.77
RTFDC1-206ENST00000477485 NCOA3Q9Y6Q9 1424 aa10.26□□□□□ -0.77
RTFDC1-206ENST00000477485 ZNF326Q5BKZ1 582 aaKnown RBP10.26□□□□□ -0.77
RTFDC1-206ENST00000477485 AMOTL2Q9Y2J4 779 aa10.26□□□□□ -0.77
RTFDC1-206ENST00000477485 NALCNQ8IZF0 1738 aa10.26□□□□□ -0.77
RTFDC1-206ENST00000477485 ASXL1Q8IXJ9 1541 aa10.26□□□□□ -0.77
RTFDC1-206ENST00000477485 NUP155O75694 1391 aa10.26□□□□□ -0.77
RTFDC1-206ENST00000477485 FOXD1Q16676 465 aa10.25□□□□□ -0.77
RTFDC1-206ENST00000477485 PIK3R4Q99570 1358 aa10.25□□□□□ -0.77
RTFDC1-206ENST00000477485 RXRBP28702 533 aa10.24□□□□□ -0.77
RTFDC1-206ENST00000477485 BRINP3Q76B58 766 aa10.24□□□□□ -0.77
RTFDC1-206ENST00000477485 PTPRUQ92729 1446 aa10.24□□□□□ -0.77
RTFDC1-206ENST00000477485 UPF1Q92900 1129 aaKnown RBP eCLIP10.23□□□□□ -0.77
RTFDC1-206ENST00000477485 SETBP1Q9Y6X0 1596 aa10.22□□□□□ -0.77
RTFDC1-206ENST00000477485 C8orf37Q96NL8 207 aa10.22□□□□□ -0.77
RTFDC1-206ENST00000477485 AFF2P51816 1311 aa10.22□□□□□ -0.77
RTFDC1-206ENST00000477485 DCCP43146 1447 aa10.22□□□□□ -0.77
RTFDC1-206ENST00000477485 CLTCL1P53675 1640 aa10.22□□□□□ -0.77
RTFDC1-206ENST00000477485 PPARGC1BQ86YN6 1023 aaKnown RBP10.21□□□□□ -0.77
RTFDC1-206ENST00000477485 ROCK1Q13464 1354 aa10.21□□□□□ -0.78
RTFDC1-206ENST00000477485 MST1RQ04912 1400 aa10.21□□□□□ -0.78
RTFDC1-206ENST00000477485 DDX17Q92841 729 aaKnown RBP10.2□□□□□ -0.78
RTFDC1-206ENST00000477485 NEXMIFQ5QGS0 1516 aa10.18□□□□□ -0.78
RTFDC1-206ENST00000477485 CDK12Q9NYV4 1490 aaPredicted RBP10.18□□□□□ -0.78
RTFDC1-206ENST00000477485 SETD5Q9C0A6 1442 aa10.18□□□□□ -0.78
RTFDC1-206ENST00000477485 ADGRL3Q9HAR2 1447 aa10.18□□□□□ -0.78
RTFDC1-206ENST00000477485 METP08581 1390 aa10.18□□□□□ -0.78
RTFDC1-206ENST00000477485 ADAMTS2O95450 1211 aa10.18□□□□□ -0.78
RTFDC1-206ENST00000477485 LRRC59Q96AG4 307 aaKnown RBP10.18□□□□□ -0.78
RTFDC1-206ENST00000477485 RGS12O14924 1447 aa10.17□□□□□ -0.78
RTFDC1-206ENST00000477485 NGLY1Q96IV0 654 aa10.17□□□□□ -0.78
RTFDC1-206ENST00000477485 QTRT2Q9H974 415 aaKnown RBP10.17□□□□□ -0.78
RTFDC1-206ENST00000477485 MARF1Q9Y4F3 1742 aaKnown RBP10.16□□□□□ -0.78
RTFDC1-206ENST00000477485 PNPLA6Q8IY17 1366 aa10.16□□□□□ -0.78
RTFDC1-206ENST00000477485 RBM6P78332 1123 aaKnown RBP10.15□□□□□ -0.78
RTFDC1-206ENST00000477485 PPLO60437 1756 aa10.15□□□□□ -0.78
RTFDC1-206ENST00000477485 C1orf167Q5SNV9 1468 aa10.14□□□□□ -0.79
RTFDC1-206ENST00000477485 LAMC1P11047 1609 aa10.12□□□□□ -0.79
RTFDC1-206ENST00000477485 USP21Q9UK80 565 aa10.12□□□□□ -0.79
RTFDC1-206ENST00000477485 ATAD2Q6PL18 1390 aa10.12□□□□□ -0.79
RTFDC1-206ENST00000477485 COL22A1Q8NFW1 1626 aaPredicted RBP10.11□□□□□ -0.79
RTFDC1-206ENST00000477485 PTCH1Q13635 1447 aa10.11□□□□□ -0.79
RTFDC1-206ENST00000477485 ORAI2Q96SN7 254 aa10.11□□□□□ -0.79
RTFDC1-206ENST00000477485 ROBO2Q9HCK4 1378 aa10.1□□□□□ -0.79
RTFDC1-206ENST00000477485 VGFO15240 615 aaPredicted RBP10.09□□□□□ -0.79
RTFDC1-206ENST00000477485 ESCO1Q5FWF5 840 aa10.09□□□□□ -0.79
RTFDC1-206ENST00000477485 TRPC5Q9UL62 973 aaPredicted RBP10.09□□□□□ -0.79
RTFDC1-206ENST00000477485 NUTM2FA1L443 756 aa10.08□□□□□ -0.8
RTFDC1-206ENST00000477485 XPCQ01831 940 aaPredicted RBP10.08□□□□□ -0.8
RTFDC1-206ENST00000477485 CDC42BPGQ6DT37 1551 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms