RNA–Protein interactions for RNA: ENST00000477334.1

RBM39-231, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 949 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-231ENST00000477334 SLC4A3P48751 1232 aa9.61□□□□□ -0.87
RBM39-231ENST00000477334 APLP1P51693 650 aa9.6□□□□□ -0.87
RBM39-231ENST00000477334 HIC1Q14526 733 aa9.6□□□□□ -0.87
RBM39-231ENST00000477334 TJAP1Q5JTD0 557 aa9.6□□□□□ -0.87
RBM39-231ENST00000477334 FAM161AQ3B820 660 aa9.59□□□□□ -0.87
RBM39-231ENST00000477334 BARGINQ6ZT62 677 aa9.59□□□□□ -0.87
RBM39-231ENST00000477334 MTRQ99707 1265 aa9.59□□□□□ -0.87
RBM39-231ENST00000477334 TMEM134Q9H6X4 195 aa9.59□□□□□ -0.87
RBM39-231ENST00000477334 SLC24A3Q9HC58 644 aa9.59□□□□□ -0.87
RBM39-231ENST00000477334 IL21Q9HBE4 155 aa9.58□□□□□ -0.88
RBM39-231ENST00000477334 RCCD1A6NED2 376 aa9.57□□□□□ -0.88
RBM39-231ENST00000477334 KRI1Q8N9T8 703 aaKnown RBP9.57□□□□□ -0.88
RBM39-231ENST00000477334 GNPATO15228 680 aa9.56□□□□□ -0.88
RBM39-231ENST00000477334 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.55□□□□□ -0.88
RBM39-231ENST00000477334 OATP04181 439 aa9.55□□□□□ -0.88
RBM39-231ENST00000477334 FECHP22830 423 aa9.55□□□□□ -0.88
RBM39-231ENST00000477334 PXYLP1Q8TE99 480 aa9.54□□□□□ -0.88
RBM39-231ENST00000477334 PRR14Q9BWN1 585 aa9.54□□□□□ -0.88
RBM39-231ENST00000477334 METTL3Q86U44 580 aaKnown RBP9.53□□□□□ -0.88
RBM39-231ENST00000477334 ZNF516Q92618 1163 aa9.52□□□□□ -0.89
RBM39-231ENST00000477334 COPS2P61201 443 aa9.5□□□□□ -0.89
RBM39-231ENST00000477334 MAP2K5Q13163 448 aa9.49□□□□□ -0.89
RBM39-231ENST00000477334 PCDHB3Q9Y5E6 796 aa9.49□□□□□ -0.89
RBM39-231ENST00000477334 MINK1Q8N4C8 1332 aaPredicted RBP9.49□□□□□ -0.89
RBM39-231ENST00000477334 IRF6O14896 467 aa9.48□□□□□ -0.89
RBM39-231ENST00000477334 CFHP08603 1231 aa9.48□□□□□ -0.89
RBM39-231ENST00000477334 AK7Q96M32 723 aa9.48□□□□□ -0.89
RBM39-231ENST00000477334 SLC10A3P09131 477 aa9.47□□□□□ -0.89
RBM39-231ENST00000477334 KMT5BQ4FZB7 885 aa9.47□□□□□ -0.89
RBM39-231ENST00000477334 CCDC102AQ96A19 550 aa9.47□□□□□ -0.89
RBM39-231ENST00000477334 IRX2Q9BZI1 471 aaPredicted RBP9.47□□□□□ -0.89
RBM39-231ENST00000477334 ACTN4O43707 911 aaKnown RBP9.46□□□□□ -0.9
RBM39-231ENST00000477334 ZPR1O75312 459 aa9.46□□□□□ -0.9
RBM39-231ENST00000477334 PPP1R18Q6NYC8 613 aa9.46□□□□□ -0.9
RBM39-231ENST00000477334 BLOC1S3Q6QNY0 202 aa9.45□□□□□ -0.9
RBM39-231ENST00000477334 NKX2-3Q8TAU0 364 aa9.45□□□□□ -0.9
RBM39-231ENST00000477334 TRIM66O15016 1216 aa9.44□□□□□ -0.9
RBM39-231ENST00000477334 RSPH4AQ5TD94 716 aa9.43□□□□□ -0.9
RBM39-231ENST00000477334 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.43□□□□□ -0.9
RBM39-231ENST00000477334 DAXXQ9UER7 740 aaPredicted RBP9.42□□□□□ -0.9
RBM39-231ENST00000477334 GGCXP38435 758 aa9.41□□□□□ -0.9
RBM39-231ENST00000477334 BRPF1P55201 1214 aaPredicted RBP9.41□□□□□ -0.9
RBM39-231ENST00000477334 NEUROD2Q15784 382 aa9.41□□□□□ -0.9
RBM39-231ENST00000477334 PHOX2BQ99453 314 aa9.41□□□□□ -0.9
RBM39-231ENST00000477334 NLRP7Q8WX94 980 aa9.4□□□□□ -0.9
RBM39-231ENST00000477334 TLL1O43897 1013 aa9.39□□□□□ -0.91
RBM39-231ENST00000477334 PDE4DQ08499 809 aa9.39□□□□□ -0.91
RBM39-231ENST00000477334 TMUB1Q9BVT8 246 aa9.39□□□□□ -0.91
RBM39-231ENST00000477334 PRKD2Q9BZL6 878 aa9.39□□□□□ -0.91
RBM39-231ENST00000477334 RDH13Q8NBN7 331 aa9.38□□□□□ -0.91
RBM39-231ENST00000477334 DDX11L8A8MPP1 907 aa9.37□□□□□ -0.91
RBM39-231ENST00000477334 NR1I2O75469 434 aa9.37□□□□□ -0.91
RBM39-231ENST00000477334 SULF1Q8IWU6 871 aa9.37□□□□□ -0.91
RBM39-231ENST00000477334 GPBP1L1Q9HC44 474 aaPredicted RBP9.37□□□□□ -0.91
RBM39-231ENST00000477334 V9GY48 417 aaPredicted RBP9.37□□□□□ -0.91
RBM39-231ENST00000477334 TTLL12Q14166 644 aaPredicted RBP9.34□□□□□ -0.91
RBM39-231ENST00000477334 AMHR2Q16671 573 aa9.34□□□□□ -0.91
RBM39-231ENST00000477334 PUS10Q3MIT2 529 aaKnown RBP9.34□□□□□ -0.91
RBM39-231ENST00000477334 RNF223E7ERA6 249 aa9.33□□□□□ -0.92
RBM39-231ENST00000477334 ADH1BP00325 375 aa9.33□□□□□ -0.92
RBM39-231ENST00000477334 SCUBE3Q8IX30 993 aa9.33□□□□□ -0.92
RBM39-231ENST00000477334 GCGRP47871 477 aa9.32□□□□□ -0.92
RBM39-231ENST00000477334 MDM2Q00987 491 aaPredicted RBP9.32□□□□□ -0.92
RBM39-231ENST00000477334 FUT2Q10981 343 aa9.32□□□□□ -0.92
RBM39-231ENST00000477334 LAPTM4AQ15012 233 aa9.32□□□□□ -0.92
RBM39-231ENST00000477334 PARP9Q8IXQ6 854 aa9.32□□□□□ -0.92
RBM39-231ENST00000477334 KDM4CQ9H3R0 1056 aa9.32□□□□□ -0.92
RBM39-231ENST00000477334 S1PR4O95977 384 aa9.31□□□□□ -0.92
RBM39-231ENST00000477334 REPIN1Q9BWE0 567 aaKnown RBP9.31□□□□□ -0.92
RBM39-231ENST00000477334 ATP6V1AP38606 617 aa9.3□□□□□ -0.92
RBM39-231ENST00000477334 MORN1Q5T089 497 aa9.3□□□□□ -0.92
RBM39-231ENST00000477334 ANKLE1Q8NAG6 615 aa9.3□□□□□ -0.92
RBM39-231ENST00000477334 SLC6A16Q9GZN6 736 aa9.29□□□□□ -0.92
RBM39-231ENST00000477334 GFRA3O60609 400 aa9.28□□□□□ -0.92
RBM39-231ENST00000477334 CLCN1P35523 988 aa9.28□□□□□ -0.92
RBM39-231ENST00000477334 GIGYF2Q6Y7W6 1299 aaKnown RBP9.28□□□□□ -0.92
RBM39-231ENST00000477334 Q6ZNB5 142 aa9.28□□□□□ -0.92
RBM39-231ENST00000477334 SPSB2Q99619 263 aa9.28□□□□□ -0.92
RBM39-231ENST00000477334 GPCPD1Q9NPB8 672 aa9.28□□□□□ -0.92
RBM39-231ENST00000477334 PPEF1O14829 653 aaPredicted RBP9.27□□□□□ -0.93
RBM39-231ENST00000477334 CD46P15529 392 aa9.26□□□□□ -0.93
RBM39-231ENST00000477334 SLC19A1P41440 591 aa9.26□□□□□ -0.93
RBM39-231ENST00000477334 EMID1Q96A84 441 aaPredicted RBP9.26□□□□□ -0.93
RBM39-231ENST00000477334 THAP11Q96EK4 314 aa9.26□□□□□ -0.93
RBM39-231ENST00000477334 SLC27A5Q9Y2P5 690 aa9.26□□□□□ -0.93
RBM39-231ENST00000477334 NRG2O14511 850 aaPredicted RBP9.25□□□□□ -0.93
RBM39-231ENST00000477334 GRIPAP1Q4V328 841 aa9.25□□□□□ -0.93
RBM39-231ENST00000477334 MS4A1P11836 297 aa9.24□□□□□ -0.93
RBM39-231ENST00000477334 IL27Q8NEV9 243 aa9.24□□□□□ -0.93
RBM39-231ENST00000477334 FAM117AQ9C073 453 aa9.24□□□□□ -0.93
RBM39-231ENST00000477334 SALL2Q9Y467 1007 aaPredicted RBP9.24□□□□□ -0.93
RBM39-231ENST00000477334 FMNL1O95466 1100 aaPredicted RBP9.23□□□□□ -0.93
RBM39-231ENST00000477334 SSTR3P32745 418 aaPredicted RBP9.23□□□□□ -0.93
RBM39-231ENST00000477334 PDZRN3Q9UPQ7 1066 aa9.23□□□□□ -0.93
RBM39-231ENST00000477334 SPRYD7Q5W111 196 aa9.22□□□□□ -0.93
RBM39-231ENST00000477334 FAM217BQ9NTX9 383 aaPredicted RBP9.22□□□□□ -0.93
RBM39-231ENST00000477334 KDM4AO75164 1064 aa9.21□□□□□ -0.94
RBM39-231ENST00000477334 TMEM132AQ24JP5 1023 aa9.21□□□□□ -0.94
RBM39-231ENST00000477334 PLA2G2CQ5R387 149 aa9.21□□□□□ -0.94
RBM39-231ENST00000477334 BRICD5Q6PL45 260 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms