RNA–Protein interactions for RNA: ENST00000476531.1

PGK1-203, Transcript of phosphoglycerate kinase 1, humanhuman

TSL 2

Gene PGK1, Length 960 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-203ENST00000476531 SLC52A1Q9NWF4 448 aa16.22■□□□□ 0.19
PGK1-203ENST00000476531 ZFYVE9O95405 1425 aa16.2■□□□□ 0.18
PGK1-203ENST00000476531 RPRD2Q5VT52 1461 aaKnown RBP16.2■□□□□ 0.18
PGK1-203ENST00000476531 POTEAQ6S8J7 498 aa16.19■□□□□ 0.18
PGK1-203ENST00000476531 ANKRD50Q9ULJ7 1429 aa16.19■□□□□ 0.18
PGK1-203ENST00000476531 PLEKHG1Q9ULL1 1385 aa16.18■□□□□ 0.18
PGK1-203ENST00000476531 RIMS2Q9UQ26 1411 aa16.17■□□□□ 0.18
PGK1-203ENST00000476531 MSH6P52701 1360 aa16.16■□□□□ 0.18
PGK1-203ENST00000476531 BCANQ96GW7 911 aa16.16■□□□□ 0.18
PGK1-203ENST00000476531 TMEM131LA2VDJ0 1609 aa16.16■□□□□ 0.18
PGK1-203ENST00000476531 FAM50AQ14320 339 aaKnown RBP16.15■□□□□ 0.18
PGK1-203ENST00000476531 SLAIN2Q9P270 581 aa16.15■□□□□ 0.18
PGK1-203ENST00000476531 CHD2O14647 1828 aaKnown RBP16.14■□□□□ 0.17
PGK1-203ENST00000476531 MYO5BQ9ULV0 1848 aa16.14■□□□□ 0.17
PGK1-203ENST00000476531 GCC2Q8IWJ2 1684 aa16.14■□□□□ 0.17
PGK1-203ENST00000476531 TBX22Q9Y458 520 aa16.12■□□□□ 0.17
PGK1-203ENST00000476531 UNC13BO14795 1591 aa16.12■□□□□ 0.17
PGK1-203ENST00000476531 ADAMTS13Q76LX8 1427 aa16.11■□□□□ 0.17
PGK1-203ENST00000476531 PHLPP1O60346 1717 aa16.11■□□□□ 0.17
PGK1-203ENST00000476531 PPP1R15AO75807 674 aaPredicted RBP16.11■□□□□ 0.17
PGK1-203ENST00000476531 JCADQ9P266 1359 aa16.11■□□□□ 0.17
PGK1-203ENST00000476531 NCOA3Q9Y6Q9 1424 aa16.11■□□□□ 0.17
PGK1-203ENST00000476531 HDGFP51858 240 aaKnown RBP16.1■□□□□ 0.17
PGK1-203ENST00000476531 COL16A1Q07092 1604 aaPredicted RBP16.09■□□□□ 0.17
PGK1-203ENST00000476531 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.08■□□□□ 0.16
PGK1-203ENST00000476531 E9PCH4 1651 aa16.08■□□□□ 0.16
PGK1-203ENST00000476531 CHGAP10645 457 aaKnown RBP16.07■□□□□ 0.16
PGK1-203ENST00000476531 NUTM2DQ5VT03 806 aaPredicted RBP16.07■□□□□ 0.16
PGK1-203ENST00000476531 DIP2AQ14689 1571 aa16.07■□□□□ 0.16
PGK1-203ENST00000476531 ROCK1Q13464 1354 aa16.06■□□□□ 0.16
PGK1-203ENST00000476531 PIK3R4Q99570 1358 aa16.06■□□□□ 0.16
PGK1-203ENST00000476531 LRP6O75581 1613 aa16.05■□□□□ 0.16
PGK1-203ENST00000476531 IQGAP3Q86VI3 1631 aa16.05■□□□□ 0.16
PGK1-203ENST00000476531 AHDC1Q5TGY3 1603 aaPredicted RBP16.04■□□□□ 0.16
PGK1-203ENST00000476531 PTPRUQ92729 1446 aa16.03■□□□□ 0.16
PGK1-203ENST00000476531 SETD1AO15047 1707 aaKnown RBP16.03■□□□□ 0.16
PGK1-203ENST00000476531 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.03■□□□□ 0.16
PGK1-203ENST00000476531 C19orf44Q9H6X5 657 aa16.03■□□□□ 0.16
PGK1-203ENST00000476531 SPATA31A6Q5VVP1 1343 aa16.02■□□□□ 0.16
PGK1-203ENST00000476531 C14orf37Q86TY3 774 aa16.02■□□□□ 0.16
PGK1-203ENST00000476531 CADPS2Q86UW7 1296 aa16.02■□□□□ 0.16
PGK1-203ENST00000476531 TRPM2O94759 1503 aa16.02■□□□□ 0.15
PGK1-203ENST00000476531 NUP155O75694 1391 aa16■□□□□ 0.15
PGK1-203ENST00000476531 ATF3P18847 181 aa16■□□□□ 0.15
PGK1-203ENST00000476531 AMOTL2Q9Y2J4 779 aa16■□□□□ 0.15
PGK1-203ENST00000476531 SHPRHQ149N8 1683 aa15.99■□□□□ 0.15
PGK1-203ENST00000476531 BRINP3Q76B58 766 aa15.98■□□□□ 0.15
PGK1-203ENST00000476531 NRXN3Q9Y4C0 1643 aa15.97■□□□□ 0.15
PGK1-203ENST00000476531 XRN1Q8IZH2 1706 aaKnown RBP15.97■□□□□ 0.15
PGK1-203ENST00000476531 SETBP1Q9Y6X0 1596 aa15.96■□□□□ 0.15
PGK1-203ENST00000476531 DCCP43146 1447 aa15.96■□□□□ 0.15
PGK1-203ENST00000476531 MEX3CQ5U5Q3 659 aaKnown RBP15.96■□□□□ 0.15
PGK1-203ENST00000476531 ZNF772Q68DY9 489 aaPredicted RBP15.96■□□□□ 0.15
PGK1-203ENST00000476531 UPF1Q92900 1129 aaKnown RBP eCLIP15.96■□□□□ 0.15
PGK1-203ENST00000476531 ASXL1Q8IXJ9 1541 aa15.94■□□□□ 0.14
PGK1-203ENST00000476531 MST1RQ04912 1400 aa15.94■□□□□ 0.14
PGK1-203ENST00000476531 SRCAPQ6ZRS2 3230 aa15.93■□□□□ 0.14
PGK1-203ENST00000476531 METP08581 1390 aa15.93■□□□□ 0.14
PGK1-203ENST00000476531 ITGAEP38570 1179 aa15.93■□□□□ 0.14
PGK1-203ENST00000476531 TRIM26Q12899 539 aaPredicted RBP15.92■□□□□ 0.14
PGK1-203ENST00000476531 TRIM52Q96A61 297 aa15.92■□□□□ 0.14
PGK1-203ENST00000476531 SETD5Q9C0A6 1442 aa15.92■□□□□ 0.14
PGK1-203ENST00000476531 SPHKAPQ2M3C7 1700 aa15.91■□□□□ 0.14
PGK1-203ENST00000476531 NUTM2BA6NNL0 878 aaPredicted RBP15.9■□□□□ 0.14
PGK1-203ENST00000476531 NUTM2EB1AL46 878 aaPredicted RBP15.9■□□□□ 0.14
PGK1-203ENST00000476531 NUTM2AQ8IVF1 878 aaPredicted RBP15.9■□□□□ 0.14
PGK1-203ENST00000476531 PCGF6Q9BYE7 350 aa15.9■□□□□ 0.14
PGK1-203ENST00000476531 NHSL1Q5SYE7 1610 aa15.9■□□□□ 0.14
PGK1-203ENST00000476531 RRBP1Q9P2E9 1410 aaKnown RBP15.89■□□□□ 0.13
PGK1-203ENST00000476531 NEXMIFQ5QGS0 1516 aa15.89■□□□□ 0.13
PGK1-203ENST00000476531 ADGRL3Q9HAR2 1447 aa15.88■□□□□ 0.13
PGK1-203ENST00000476531 RXRBP28702 533 aa15.88■□□□□ 0.13
PGK1-203ENST00000476531 ZNF326Q5BKZ1 582 aaKnown RBP15.88■□□□□ 0.13
PGK1-203ENST00000476531 CDK12Q9NYV4 1490 aaPredicted RBP15.88■□□□□ 0.13
PGK1-203ENST00000476531 CLTCL1P53675 1640 aa15.87■□□□□ 0.13
PGK1-203ENST00000476531 AFF2P51816 1311 aa15.87■□□□□ 0.13
PGK1-203ENST00000476531 DDX17Q92841 729 aaKnown RBP15.86■□□□□ 0.13
PGK1-203ENST00000476531 PNPLA6Q8IY17 1366 aa15.86■□□□□ 0.13
PGK1-203ENST00000476531 LRRC59Q96AG4 307 aaKnown RBP15.85■□□□□ 0.13
PGK1-203ENST00000476531 NALCNQ8IZF0 1738 aa15.85■□□□□ 0.13
PGK1-203ENST00000476531 C1orf167Q5SNV9 1468 aa15.83■□□□□ 0.12
PGK1-203ENST00000476531 RGS12O14924 1447 aa15.82■□□□□ 0.12
PGK1-203ENST00000476531 PTCH1Q13635 1447 aa15.81■□□□□ 0.12
PGK1-203ENST00000476531 C8orf37Q96NL8 207 aa15.81■□□□□ 0.12
PGK1-203ENST00000476531 LAMC1P11047 1609 aa15.8■□□□□ 0.12
PGK1-203ENST00000476531 ROBO2Q9HCK4 1378 aa15.8■□□□□ 0.12
PGK1-203ENST00000476531 NAIPQ13075 1403 aa15.79■□□□□ 0.12
PGK1-203ENST00000476531 PRAG1Q86YV5 1406 aa15.79■□□□□ 0.12
PGK1-203ENST00000476531 QTRT2Q9H974 415 aaKnown RBP15.79■□□□□ 0.12
PGK1-203ENST00000476531 RBM6P78332 1123 aaKnown RBP15.78■□□□□ 0.12
PGK1-203ENST00000476531 KIF1BO60333 1816 aa15.78■□□□□ 0.12
PGK1-203ENST00000476531 SOS2Q07890 1332 aaPredicted RBP15.77■□□□□ 0.12
PGK1-203ENST00000476531 ORAI2Q96SN7 254 aa15.77■□□□□ 0.12
PGK1-203ENST00000476531 VGFO15240 615 aaPredicted RBP15.76■□□□□ 0.11
PGK1-203ENST00000476531 ADAMTS2O95450 1211 aa15.75■□□□□ 0.11
PGK1-203ENST00000476531 RPGRIP1LQ68CZ1 1315 aa15.74■□□□□ 0.11
PGK1-203ENST00000476531 NGLY1Q96IV0 654 aa15.74■□□□□ 0.11
PGK1-203ENST00000476531 HFM1A2PYH4 1435 aa15.72■□□□□ 0.11
PGK1-203ENST00000476531 COL22A1Q8NFW1 1626 aaPredicted RBP15.72■□□□□ 0.11
PGK1-203ENST00000476531 PPLO60437 1756 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms