RNA–Protein interactions for RNA: ENST00000476163.5

CAMTA1-209, Transcript of calmodulin binding transcription activator 1, human

TSL 2

Gene CAMTA1, Length 863 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAMTA1-209	ENST00000476163	TMEM131L	A2VDJ0	1609 aa		29.3	■■■□□ 2.28
CAMTA1-209	ENST00000476163	NAIP	Q13075	1403 aa		29.29	■■■□□ 2.28
CAMTA1-209	ENST00000476163	HSPA1L	P34931	641 aa		29.29	■■■□□ 2.28
CAMTA1-209	ENST00000476163	RBM33	Q96EV2	1170 aa	Known RBP	29.29	■■■□□ 2.28
CAMTA1-209	ENST00000476163	ZFYVE9	O95405	1425 aa		29.28	■■■□□ 2.28
CAMTA1-209	ENST00000476163	RIMS2	Q9UQ26	1411 aa		29.28	■■■□□ 2.28
CAMTA1-209	ENST00000476163	DISP3	Q9P2K9	1392 aa		29.27	■■■□□ 2.28
CAMTA1-209	ENST00000476163	PPP1R15A	O75807	674 aa	Predicted RBP	29.25	■■■□□ 2.27
CAMTA1-209	ENST00000476163	KCNA6	P17658	529 aa		29.22	■■■□□ 2.27
CAMTA1-209	ENST00000476163	XIRP1	Q702N8	1843 aa	Known RBP	29.2	■■■□□ 2.27
CAMTA1-209	ENST00000476163	PLEKHG1	Q9ULL1	1385 aa		29.19	■■■□□ 2.26
CAMTA1-209	ENST00000476163	TRIM52	Q96A61	297 aa		29.19	■■■□□ 2.26
CAMTA1-209	ENST00000476163	PROSER2	Q86WR7	435 aa	Predicted RBP	29.18	■■■□□ 2.26
CAMTA1-209	ENST00000476163	TMEM94	Q12767	1356 aa		29.17	■■■□□ 2.26
CAMTA1-209	ENST00000476163	HDGF	P51858	240 aa	Known RBP	29.16	■■■□□ 2.26
CAMTA1-209	ENST00000476163	ILDR2	Q71H61	639 aa		29.16	■■■□□ 2.26
CAMTA1-209	ENST00000476163	HFM1	A2PYH4	1435 aa		29.15	■■■□□ 2.26
CAMTA1-209	ENST00000476163	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	29.14	■■■□□ 2.26
CAMTA1-209	ENST00000476163	SPHKAP	Q2M3C7	1700 aa		29.13	■■■□□ 2.25
CAMTA1-209	ENST00000476163	ADAMTS13	Q76LX8	1427 aa		29.11	■■■□□ 2.25
CAMTA1-209	ENST00000476163	ZNF326	Q5BKZ1	582 aa	Known RBP	29.1	■■■□□ 2.25
CAMTA1-209	ENST00000476163	TBX22	Q9Y458	520 aa		29.09	■■■□□ 2.25
CAMTA1-209	ENST00000476163	NWD1	Q149M9	1564 aa		29.08	■■■□□ 2.25
CAMTA1-209	ENST00000476163	CLTCL1	P53675	1640 aa		29.06	■■■□□ 2.24
CAMTA1-209	ENST00000476163	SLC4A1AP	Q9BWU0	796 aa	Known RBP	29.06	■■■□□ 2.24
CAMTA1-209	ENST00000476163	FOXD1	Q16676	465 aa		29.05	■■■□□ 2.24
CAMTA1-209	ENST00000476163	CHD2	O14647	1828 aa	Known RBP	29.04	■■■□□ 2.24
CAMTA1-209	ENST00000476163	NKTR	P30414	1462 aa	Known RBP	29.03	■■■□□ 2.24
CAMTA1-209	ENST00000476163	TRPM2	O94759	1503 aa		29.01	■■■□□ 2.23
CAMTA1-209	ENST00000476163	PTPRU	Q92729	1446 aa		28.98	■■■□□ 2.23
CAMTA1-209	ENST00000476163	AMOTL2	Q9Y2J4	779 aa		28.96	■■■□□ 2.23
CAMTA1-209	ENST00000476163	MSH6	P52701	1360 aa		28.95	■■■□□ 2.22
CAMTA1-209	ENST00000476163	NRXN3	Q9Y4C0	1643 aa		28.94	■■■□□ 2.22
CAMTA1-209	ENST00000476163	MED1	Q15648	1581 aa	Predicted RBP	28.93	■■■□□ 2.22
CAMTA1-209	ENST00000476163	C14orf37	Q86TY3	774 aa		28.93	■■■□□ 2.22
CAMTA1-209	ENST00000476163	NEXMIF	Q5QGS0	1516 aa		28.93	■■■□□ 2.22
CAMTA1-209	ENST00000476163	FAM135B	Q49AJ0	1406 aa		28.93	■■■□□ 2.22
CAMTA1-209	ENST00000476163	DIP2A	Q14689	1571 aa		28.92	■■■□□ 2.22
CAMTA1-209	ENST00000476163	MET	P08581	1390 aa		28.91	■■■□□ 2.22
CAMTA1-209	ENST00000476163	PIK3R4	Q99570	1358 aa		28.9	■■■□□ 2.22
CAMTA1-209	ENST00000476163	SLAIN2	Q9P270	581 aa		28.9	■■■□□ 2.22
CAMTA1-209	ENST00000476163	KIF1B	O60333	1816 aa		28.9	■■■□□ 2.22
CAMTA1-209	ENST00000476163	SETBP1	Q9Y6X0	1596 aa		28.89	■■■□□ 2.22
CAMTA1-209	ENST00000476163	MPHOSPH9	Q99550	1183 aa		28.89	■■■□□ 2.22
CAMTA1-209	ENST00000476163	ROBO1	Q9Y6N7	1651 aa		28.89	■■■□□ 2.21
CAMTA1-209	ENST00000476163	C19orf44	Q9H6X5	657 aa		28.81	■■■□□ 2.2
CAMTA1-209	ENST00000476163	SETD5	Q9C0A6	1442 aa		28.8	■■■□□ 2.2
CAMTA1-209	ENST00000476163	NCOA3	Q9Y6Q9	1424 aa		28.8	■■■□□ 2.2
CAMTA1-209	ENST00000476163	RGL3	Q3MIN7	710 aa		28.8	■■■□□ 2.2
CAMTA1-209	ENST00000476163	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	28.8	■■■□□ 2.2
CAMTA1-209	ENST00000476163	VGF	O15240	615 aa	Predicted RBP	28.79	■■■□□ 2.2
CAMTA1-209	ENST00000476163	XRN1	Q8IZH2	1706 aa	Known RBP	28.79	■■■□□ 2.2
CAMTA1-209	ENST00000476163	ATF3	P18847	181 aa		28.78	■■■□□ 2.2
CAMTA1-209	ENST00000476163	PHF23	Q9BUL5	403 aa	Predicted RBP	28.77	■■■□□ 2.2
CAMTA1-209	ENST00000476163	SOCS7	O14512	581 aa		28.76	■■■□□ 2.19
CAMTA1-209	ENST00000476163	RPGRIP1L	Q68CZ1	1315 aa		28.75	■■■□□ 2.19
CAMTA1-209	ENST00000476163	CADPS2	Q86UW7	1296 aa		28.75	■■■□□ 2.19
CAMTA1-209	ENST00000476163	CCDC144A	A2RUR9	1427 aa		28.75	■■■□□ 2.19
CAMTA1-209	ENST00000476163	RAB3GAP2	Q9H2M9	1393 aa		28.74	■■■□□ 2.19
CAMTA1-209	ENST00000476163	ADGRF5	Q8IZF2	1346 aa		28.72	■■■□□ 2.19
CAMTA1-209	ENST00000476163	PPL	O60437	1756 aa		28.71	■■■□□ 2.19
CAMTA1-209	ENST00000476163	SPATA31E1	Q6ZUB1	1445 aa		28.69	■■■□□ 2.18
CAMTA1-209	ENST00000476163	PHLPP1	O60346	1717 aa		28.69	■■■□□ 2.18
CAMTA1-209	ENST00000476163	SETD1A	O15047	1707 aa	Known RBP	28.69	■■■□□ 2.18
CAMTA1-209	ENST00000476163	RGS17	Q9UGC6	210 aa	Predicted RBP	28.68	■■■□□ 2.18
CAMTA1-209	ENST00000476163	ROBO2	Q9HCK4	1378 aa		28.66	■■■□□ 2.18
CAMTA1-209	ENST00000476163	BRINP3	Q76B58	766 aa		28.66	■■■□□ 2.18
CAMTA1-209	ENST00000476163	MST1R	Q04912	1400 aa		28.62	■■■□□ 2.17
CAMTA1-209	ENST00000476163	COL16A1	Q07092	1604 aa	Predicted RBP	28.61	■■■□□ 2.17
CAMTA1-209	ENST00000476163	ADGRL3	Q9HAR2	1447 aa		28.61	■■■□□ 2.17
CAMTA1-209	ENST00000476163	DDX17	Q92841	729 aa	Known RBP	28.61	■■■□□ 2.17
CAMTA1-209	ENST00000476163	DCC	P43146	1447 aa		28.6	■■■□□ 2.17
CAMTA1-209	ENST00000476163	NALCN	Q8IZF0	1738 aa		28.6	■■■□□ 2.17
CAMTA1-209	ENST00000476163	TMEM132E	Q6IEE7	984 aa		28.59	■■■□□ 2.17
CAMTA1-209	ENST00000476163	STK26	Q9P289	416 aa		28.59	■■■□□ 2.17
CAMTA1-209	ENST00000476163	JCAD	Q9P266	1359 aa		28.59	■■■□□ 2.17
CAMTA1-209	ENST00000476163	PTCH1	Q13635	1447 aa		28.56	■■■□□ 2.16
CAMTA1-209	ENST00000476163	ANKRD30B	Q9BXX2	1392 aa		28.56	■■■□□ 2.16
CAMTA1-209	ENST00000476163	IFT172	Q9UG01	1749 aa		28.56	■■■□□ 2.16
CAMTA1-209	ENST00000476163	AHDC1	Q5TGY3	1603 aa	Predicted RBP	28.55	■■■□□ 2.16
CAMTA1-209	ENST00000476163	ASXL1	Q8IXJ9	1541 aa		28.55	■■■□□ 2.16
CAMTA1-209	ENST00000476163	ACIN1	Q9UKV3	1341 aa	Known RBP	28.53	■■■□□ 2.16
CAMTA1-209	ENST00000476163	POTEA	Q6S8J7	498 aa		28.52	■■■□□ 2.16
CAMTA1-209	ENST00000476163	WAPL	Q7Z5K2	1190 aa		28.52	■■■□□ 2.16
CAMTA1-209	ENST00000476163	ORAI2	Q96SN7	254 aa		28.5	■■■□□ 2.15
CAMTA1-209	ENST00000476163	PIK3C2G	O75747	1445 aa		28.5	■■■□□ 2.15
CAMTA1-209	ENST00000476163	C1orf167	Q5SNV9	1468 aa		28.49	■■■□□ 2.15
CAMTA1-209	ENST00000476163	LRP6	O75581	1613 aa		28.49	■■■□□ 2.15
CAMTA1-209	ENST00000476163	PRAG1	Q86YV5	1406 aa		28.48	■■■□□ 2.15
CAMTA1-209	ENST00000476163	PLEKHH1	Q9ULM0	1364 aa		28.48	■■■□□ 2.15
CAMTA1-209	ENST00000476163	CFAP70	Q5T0N1	1121 aa		28.47	■■■□□ 2.15
CAMTA1-209	ENST00000476163	NUTM2B	A6NNL0	878 aa	Predicted RBP	28.46	■■■□□ 2.15
CAMTA1-209	ENST00000476163	NUTM2E	B1AL46	878 aa	Predicted RBP	28.46	■■■□□ 2.15
CAMTA1-209	ENST00000476163	NUTM2A	Q8IVF1	878 aa	Predicted RBP	28.46	■■■□□ 2.15
CAMTA1-209	ENST00000476163	LRPPRC	P42704	1394 aa	Known RBP	28.45	■■■□□ 2.14
CAMTA1-209	ENST00000476163	SPATA31A6	Q5VVP1	1343 aa		28.43	■■■□□ 2.14
CAMTA1-209	ENST00000476163	NHSL1	Q5SYE7	1610 aa		28.43	■■■□□ 2.14
CAMTA1-209	ENST00000476163	NUTM2F	A1L443	756 aa		28.43	■■■□□ 2.14
CAMTA1-209	ENST00000476163	C14orf93	Q9H972	538 aa	Known RBP	28.43	■■■□□ 2.14
CAMTA1-209	ENST00000476163	MEX3C	Q5U5Q3	659 aa	Known RBP	28.41	■■■□□ 2.14

Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms