RNA–Protein interactions for RNA: ENST00000476061.5

PTPN7-208, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 4

Gene PTPN7, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-208ENST00000476061 CHD2O14647 1828 aaKnown RBP15.19■□□□□ 0.02
PTPN7-208ENST00000476061 NKTRP30414 1462 aaKnown RBP15.18■□□□□ 0.02
PTPN7-208ENST00000476061 MED1Q15648 1581 aaPredicted RBP15.18■□□□□ 0.02
PTPN7-208ENST00000476061 PLEKHG1Q9ULL1 1385 aa15.17■□□□□ 0.02
PTPN7-208ENST00000476061 SOCS7O14512 581 aa15.17■□□□□ 0.02
PTPN7-208ENST00000476061 SLC26A8Q96RN1 970 aa15.15■□□□□ 0.02
PTPN7-208ENST00000476061 RIMS2Q9UQ26 1411 aa15.15■□□□□ 0.02
PTPN7-208ENST00000476061 SPHKAPQ2M3C7 1700 aa15.14■□□□□ 0.01
PTPN7-208ENST00000476061 NUP155O75694 1391 aa15.14■□□□□ 0.01
PTPN7-208ENST00000476061 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.14■□□□□ 0.01
PTPN7-208ENST00000476061 RRBP1Q9P2E9 1410 aaKnown RBP15.14■□□□□ 0.01
PTPN7-208ENST00000476061 TMEM94Q12767 1356 aa15.13■□□□□ 0.01
PTPN7-208ENST00000476061 DIP2AQ14689 1571 aa15.13■□□□□ 0.01
PTPN7-208ENST00000476061 FAM135BQ49AJ0 1406 aa15.13■□□□□ 0.01
PTPN7-208ENST00000476061 ITGAEP38570 1179 aa15.12■□□□□ 0.01
PTPN7-208ENST00000476061 PROSER2Q86WR7 435 aaPredicted RBP15.11■□□□□ 0.01
PTPN7-208ENST00000476061 TBX22Q9Y458 520 aa15.11■□□□□ 0.01
PTPN7-208ENST00000476061 PPP1R15AO75807 674 aaPredicted RBP15.1■□□□□ 0.01
PTPN7-208ENST00000476061 BCANQ96GW7 911 aa15.1■□□□□ 0.01
PTPN7-208ENST00000476061 NCOA3Q9Y6Q9 1424 aa15.09■□□□□ 0.01
PTPN7-208ENST00000476061 PPARGC1BQ86YN6 1023 aaKnown RBP15.09■□□□□ 0.01
PTPN7-208ENST00000476061 ROBO1Q9Y6N7 1651 aa15.09■□□□□ 0.01
PTPN7-208ENST00000476061 PIK3R4Q99570 1358 aa15.09■□□□□ 0.01
PTPN7-208ENST00000476061 ADAMTS13Q76LX8 1427 aa15.08■□□□□ 0
PTPN7-208ENST00000476061 CHGAP10645 457 aaKnown RBP15.07■□□□□ 0
PTPN7-208ENST00000476061 MSH6P52701 1360 aa15.07■□□□□ 0
PTPN7-208ENST00000476061 NAIPQ13075 1403 aa15.06■□□□□ 0
PTPN7-208ENST00000476061 TRPM2O94759 1503 aa15.06■□□□□ 0
PTPN7-208ENST00000476061 KIF1BO60333 1816 aa15.06■□□□□ 0
PTPN7-208ENST00000476061 SETBP1Q9Y6X0 1596 aa15.04■□□□□ -0
PTPN7-208ENST00000476061 NRXN3Q9Y4C0 1643 aa15.03■□□□□ -0
PTPN7-208ENST00000476061 CLTCL1P53675 1640 aa15.03■□□□□ -0
PTPN7-208ENST00000476061 RBM33Q96EV2 1170 aaKnown RBP15.02■□□□□ -0
PTPN7-208ENST00000476061 PHF23Q9BUL5 403 aaPredicted RBP15.02■□□□□ -0
PTPN7-208ENST00000476061 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.02□□□□□ -0.01
PTPN7-208ENST00000476061 HFM1A2PYH4 1435 aa15.01□□□□□ -0.01
PTPN7-208ENST00000476061 PHLPP1O60346 1717 aa15.01□□□□□ -0.01
PTPN7-208ENST00000476061 SLAIN2Q9P270 581 aa15.01□□□□□ -0.01
PTPN7-208ENST00000476061 XRN1Q8IZH2 1706 aaKnown RBP15□□□□□ -0.01
PTPN7-208ENST00000476061 NUTM2DQ5VT03 806 aaPredicted RBP15□□□□□ -0.01
PTPN7-208ENST00000476061 SENP3Q9H4L4 574 aaPredicted RBP15□□□□□ -0.01
PTPN7-208ENST00000476061 NEXMIFQ5QGS0 1516 aa14.99□□□□□ -0.01
PTPN7-208ENST00000476061 C19orf44Q9H6X5 657 aa14.98□□□□□ -0.01
PTPN7-208ENST00000476061 PTPRUQ92729 1446 aa14.98□□□□□ -0.01
PTPN7-208ENST00000476061 CADPS2Q86UW7 1296 aa14.97□□□□□ -0.01
PTPN7-208ENST00000476061 AMOTL2Q9Y2J4 779 aa14.97□□□□□ -0.01
PTPN7-208ENST00000476061 DCCP43146 1447 aa14.96□□□□□ -0.01
PTPN7-208ENST00000476061 ZNF326Q5BKZ1 582 aaKnown RBP14.96□□□□□ -0.01
PTPN7-208ENST00000476061 COL16A1Q07092 1604 aaPredicted RBP14.95□□□□□ -0.02
PTPN7-208ENST00000476061 AHDC1Q5TGY3 1603 aaPredicted RBP14.95□□□□□ -0.02
PTPN7-208ENST00000476061 C14orf37Q86TY3 774 aa14.94□□□□□ -0.02
PTPN7-208ENST00000476061 SETD1AO15047 1707 aaKnown RBP14.93□□□□□ -0.02
PTPN7-208ENST00000476061 ATF3P18847 181 aa14.93□□□□□ -0.02
PTPN7-208ENST00000476061 JCADQ9P266 1359 aa14.93□□□□□ -0.02
PTPN7-208ENST00000476061 PPLO60437 1756 aa14.93□□□□□ -0.02
PTPN7-208ENST00000476061 TRIM52Q96A61 297 aa14.92□□□□□ -0.02
PTPN7-208ENST00000476061 RGS17Q9UGC6 210 aaPredicted RBP14.92□□□□□ -0.02
PTPN7-208ENST00000476061 METP08581 1390 aa14.92□□□□□ -0.02
PTPN7-208ENST00000476061 RPGRIP1LQ68CZ1 1315 aa14.92□□□□□ -0.02
PTPN7-208ENST00000476061 SHPRHQ149N8 1683 aa14.91□□□□□ -0.02
PTPN7-208ENST00000476061 SLC4A1APQ9BWU0 796 aaKnown RBP14.91□□□□□ -0.02
PTPN7-208ENST00000476061 VGFO15240 615 aaPredicted RBP14.9□□□□□ -0.02
PTPN7-208ENST00000476061 NALCNQ8IZF0 1738 aa14.89□□□□□ -0.03
PTPN7-208ENST00000476061 PRAG1Q86YV5 1406 aa14.89□□□□□ -0.03
PTPN7-208ENST00000476061 ACIN1Q9UKV3 1341 aaKnown RBP14.89□□□□□ -0.03
PTPN7-208ENST00000476061 NHSL1Q5SYE7 1610 aa14.88□□□□□ -0.03
PTPN7-208ENST00000476061 SPATA31A6Q5VVP1 1343 aa14.88□□□□□ -0.03
PTPN7-208ENST00000476061 MST1RQ04912 1400 aa14.87□□□□□ -0.03
PTPN7-208ENST00000476061 ADGRL3Q9HAR2 1447 aa14.87□□□□□ -0.03
PTPN7-208ENST00000476061 PTCH1Q13635 1447 aa14.86□□□□□ -0.03
PTPN7-208ENST00000476061 BRINP3Q76B58 766 aa14.86□□□□□ -0.03
PTPN7-208ENST00000476061 ASXL1Q8IXJ9 1541 aa14.86□□□□□ -0.03
PTPN7-208ENST00000476061 IFT172Q9UG01 1749 aa14.86□□□□□ -0.03
PTPN7-208ENST00000476061 LAMC1P11047 1609 aa14.84□□□□□ -0.03
PTPN7-208ENST00000476061 CCDC144AA2RUR9 1427 aa14.83□□□□□ -0.04
PTPN7-208ENST00000476061 SETD5Q9C0A6 1442 aa14.83□□□□□ -0.04
PTPN7-208ENST00000476061 LRP6O75581 1613 aa14.82□□□□□ -0.04
PTPN7-208ENST00000476061 POTEAQ6S8J7 498 aa14.82□□□□□ -0.04
PTPN7-208ENST00000476061 MPHOSPH9Q99550 1183 aa14.81□□□□□ -0.04
PTPN7-208ENST00000476061 SPATA31E1Q6ZUB1 1445 aa14.81□□□□□ -0.04
PTPN7-208ENST00000476061 ANKRD30BQ9BXX2 1392 aa14.79□□□□□ -0.04
PTPN7-208ENST00000476061 ROBO2Q9HCK4 1378 aa14.79□□□□□ -0.04
PTPN7-208ENST00000476061 KNDC1Q76NI1 1749 aa14.78□□□□□ -0.04
PTPN7-208ENST00000476061 C1orf167Q5SNV9 1468 aa14.78□□□□□ -0.04
PTPN7-208ENST00000476061 FOXD1Q16676 465 aa14.78□□□□□ -0.04
PTPN7-208ENST00000476061 LRRC59Q96AG4 307 aaKnown RBP14.78□□□□□ -0.04
PTPN7-208ENST00000476061 ZNF772Q68DY9 489 aaPredicted RBP14.77□□□□□ -0.05
PTPN7-208ENST00000476061 CDC42BPGQ6DT37 1551 aa14.77□□□□□ -0.05
PTPN7-208ENST00000476061 TECPR2O15040 1411 aa14.75□□□□□ -0.05
PTPN7-208ENST00000476061 MEX3CQ5U5Q3 659 aaKnown RBP14.75□□□□□ -0.05
PTPN7-208ENST00000476061 ADGRF5Q8IZF2 1346 aa14.74□□□□□ -0.05
PTPN7-208ENST00000476061 PIK3C2GO75747 1445 aa14.74□□□□□ -0.05
PTPN7-208ENST00000476061 RGL3Q3MIN7 710 aa14.73□□□□□ -0.05
PTPN7-208ENST00000476061 PNPLA6Q8IY17 1366 aa14.73□□□□□ -0.05
PTPN7-208ENST00000476061 ABCC11Q96J66 1382 aa14.73□□□□□ -0.05
PTPN7-208ENST00000476061 SOS2Q07890 1332 aaPredicted RBP14.72□□□□□ -0.05
PTPN7-208ENST00000476061 LRPPRCP42704 1394 aaKnown RBP14.72□□□□□ -0.05
PTPN7-208ENST00000476061 COL22A1Q8NFW1 1626 aaPredicted RBP14.71□□□□□ -0.05
PTPN7-208ENST00000476061 MYOM2P54296 1465 aa14.7□□□□□ -0.06
PTPN7-208ENST00000476061 NRXN1Q9ULB1 1477 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms