RNA–Protein interactions for RNA: ENST00000475912.1

PRKD3-208, Transcript of protein kinase D3, humanhuman

TSL 3

Gene PRKD3, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-208ENST00000475912 NLRP7Q8WX94 980 aa11.61□□□□□ -0.55
PRKD3-208ENST00000475912 SLC4A3P48751 1232 aa11.6□□□□□ -0.55
PRKD3-208ENST00000475912 PHOX2BQ99453 314 aa11.6□□□□□ -0.55
PRKD3-208ENST00000475912 ZC3H15Q8WU90 426 aaKnown RBP11.59□□□□□ -0.55
PRKD3-208ENST00000475912 BCANQ96GW7 911 aa11.58□□□□□ -0.56
PRKD3-208ENST00000475912 IRF6O14896 467 aa11.57□□□□□ -0.56
PRKD3-208ENST00000475912 APLP1P51693 650 aa11.57□□□□□ -0.56
PRKD3-208ENST00000475912 MINK1Q8N4C8 1332 aaPredicted RBP11.57□□□□□ -0.56
PRKD3-208ENST00000475912 NECTIN2Q92692 538 aa11.56□□□□□ -0.56
PRKD3-208ENST00000475912 CCDC102AQ96A19 550 aa11.56□□□□□ -0.56
PRKD3-208ENST00000475912 ZMYND10O75800 440 aa11.55□□□□□ -0.56
PRKD3-208ENST00000475912 SLC10A3P09131 477 aa11.53□□□□□ -0.56
PRKD3-208ENST00000475912 BARGINQ6ZT62 677 aa11.53□□□□□ -0.56
PRKD3-208ENST00000475912 KRI1Q8N9T8 703 aaKnown RBP11.53□□□□□ -0.56
PRKD3-208ENST00000475912 ITGBL1O95965 494 aaPredicted RBP11.52□□□□□ -0.57
PRKD3-208ENST00000475912 DAXXQ9UER7 740 aaPredicted RBP11.52□□□□□ -0.57
PRKD3-208ENST00000475912 CFHP08603 1231 aa11.5□□□□□ -0.57
PRKD3-208ENST00000475912 MTRQ99707 1265 aa11.49□□□□□ -0.57
PRKD3-208ENST00000475912 DDX11L8A8MPP1 907 aa11.48□□□□□ -0.57
PRKD3-208ENST00000475912 KCNC4Q03721 635 aa11.48□□□□□ -0.57
PRKD3-208ENST00000475912 MDM2Q00987 491 aaPredicted RBP11.47□□□□□ -0.57
PRKD3-208ENST00000475912 KMT5BQ4FZB7 885 aa11.47□□□□□ -0.57
PRKD3-208ENST00000475912 TJAP1Q5JTD0 557 aa11.47□□□□□ -0.57
PRKD3-208ENST00000475912 IFFO2Q5TF58 517 aa11.47□□□□□ -0.57
PRKD3-208ENST00000475912 RDH13Q8NBN7 331 aa11.47□□□□□ -0.57
PRKD3-208ENST00000475912 PRR14Q9BWN1 585 aa11.47□□□□□ -0.57
PRKD3-208ENST00000475912 COPS2P61201 443 aa11.45□□□□□ -0.58
PRKD3-208ENST00000475912 RSPH4AQ5TD94 716 aa11.45□□□□□ -0.58
PRKD3-208ENST00000475912 ACTN4O43707 911 aaKnown RBP11.44□□□□□ -0.58
PRKD3-208ENST00000475912 SULF1Q8IWU6 871 aa11.44□□□□□ -0.58
PRKD3-208ENST00000475912 IL21Q9HBE4 155 aa11.44□□□□□ -0.58
PRKD3-208ENST00000475912 PCDHB3Q9Y5E6 796 aa11.44□□□□□ -0.58
PRKD3-208ENST00000475912 ZNF516Q92618 1163 aa11.43□□□□□ -0.58
PRKD3-208ENST00000475912 BLOC1S3Q6QNY0 202 aa11.42□□□□□ -0.58
PRKD3-208ENST00000475912 A0A0G2JS52 829 aa11.4□□□□□ -0.58
PRKD3-208ENST00000475912 CLCN1P35523 988 aa11.4□□□□□ -0.58
PRKD3-208ENST00000475912 GPCPD1Q9NPB8 672 aa11.4□□□□□ -0.58
PRKD3-208ENST00000475912 RGS20O76081 388 aa11.38□□□□□ -0.59
PRKD3-208ENST00000475912 CD46P15529 392 aa11.38□□□□□ -0.59
PRKD3-208ENST00000475912 GCGRP47871 477 aa11.38□□□□□ -0.59
PRKD3-208ENST00000475912 REPIN1Q9BWE0 567 aaKnown RBP11.38□□□□□ -0.59
PRKD3-208ENST00000475912 SLC24A3Q9HC58 644 aa11.38□□□□□ -0.59
PRKD3-208ENST00000475912 PUS10Q3MIT2 529 aaKnown RBP11.37□□□□□ -0.59
PRKD3-208ENST00000475912 TMUB1Q9BVT8 246 aa11.37□□□□□ -0.59
PRKD3-208ENST00000475912 ZPR1O75312 459 aa11.36□□□□□ -0.59
PRKD3-208ENST00000475912 TTLL12Q14166 644 aaPredicted RBP11.36□□□□□ -0.59
PRKD3-208ENST00000475912 AMHR2Q16671 573 aa11.36□□□□□ -0.59
PRKD3-208ENST00000475912 NKX2-3Q8TAU0 364 aa11.36□□□□□ -0.59
PRKD3-208ENST00000475912 AK7Q96M32 723 aa11.36□□□□□ -0.59
PRKD3-208ENST00000475912 TRIM66O15016 1216 aa11.35□□□□□ -0.59
PRKD3-208ENST00000475912 FUT2Q10981 343 aa11.35□□□□□ -0.59
PRKD3-208ENST00000475912 FAM217BQ9NTX9 383 aaPredicted RBP11.35□□□□□ -0.59
PRKD3-208ENST00000475912 TLL1O43897 1013 aa11.33□□□□□ -0.6
PRKD3-208ENST00000475912 NR1I2O75469 434 aa11.32□□□□□ -0.6
PRKD3-208ENST00000475912 ATP6V1AP38606 617 aa11.3□□□□□ -0.6
PRKD3-208ENST00000475912 MORN1Q5T089 497 aa11.3□□□□□ -0.6
PRKD3-208ENST00000475912 GIGYF2Q6Y7W6 1299 aaKnown RBP11.3□□□□□ -0.6
PRKD3-208ENST00000475912 SCUBE3Q8IX30 993 aa11.3□□□□□ -0.6
PRKD3-208ENST00000475912 PARP9Q8IXQ6 854 aa11.3□□□□□ -0.6
PRKD3-208ENST00000475912 SSTR3P32745 418 aaPredicted RBP11.29□□□□□ -0.6
PRKD3-208ENST00000475912 KDM4AO75164 1064 aa11.28□□□□□ -0.6
PRKD3-208ENST00000475912 PPP1R18Q6NYC8 613 aa11.28□□□□□ -0.6
PRKD3-208ENST00000475912 IRX2Q9BZI1 471 aaPredicted RBP11.28□□□□□ -0.6
PRKD3-208ENST00000475912 PDE4DQ08499 809 aa11.26□□□□□ -0.61
PRKD3-208ENST00000475912 SLC27A5Q9Y2P5 690 aa11.26□□□□□ -0.61
PRKD3-208ENST00000475912 GRIPAP1Q4V328 841 aa11.25□□□□□ -0.61
PRKD3-208ENST00000475912 ADH1BP00325 375 aa11.24□□□□□ -0.61
PRKD3-208ENST00000475912 HLA-CQ95604 372 aa11.24□□□□□ -0.61
PRKD3-208ENST00000475912 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.24□□□□□ -0.61
PRKD3-208ENST00000475912 NUTM1Q86Y26 1132 aa11.23□□□□□ -0.61
PRKD3-208ENST00000475912 HOXA2O43364 376 aa11.22□□□□□ -0.61
PRKD3-208ENST00000475912 S1PR4O95977 384 aa11.22□□□□□ -0.61
PRKD3-208ENST00000475912 MS4A1P11836 297 aa11.22□□□□□ -0.61
PRKD3-208ENST00000475912 USP46P62068 366 aa11.22□□□□□ -0.61
PRKD3-208ENST00000475912 THAP11Q96EK4 314 aa11.22□□□□□ -0.61
PRKD3-208ENST00000475912 SPSB2Q99619 263 aa11.22□□□□□ -0.61
PRKD3-208ENST00000475912 GGCXP38435 758 aa11.21□□□□□ -0.61
PRKD3-208ENST00000475912 FMNL1O95466 1100 aaPredicted RBP11.2□□□□□ -0.62
PRKD3-208ENST00000475912 RNF19BQ6ZMZ0 732 aa11.2□□□□□ -0.62
PRKD3-208ENST00000475912 BEGAINQ9BUH8 593 aa11.2□□□□□ -0.62
PRKD3-208ENST00000475912 GUCA2AQ02747 115 aa11.19□□□□□ -0.62
PRKD3-208ENST00000475912 SPIRE2Q8WWL2 714 aa11.19□□□□□ -0.62
PRKD3-208ENST00000475912 SLC6A16Q9GZN6 736 aa11.19□□□□□ -0.62
PRKD3-208ENST00000475912 RNF223E7ERA6 249 aa11.18□□□□□ -0.62
PRKD3-208ENST00000475912 BRICD5Q6PL45 260 aa11.18□□□□□ -0.62
PRKD3-208ENST00000475912 PPEF1O14829 653 aaPredicted RBP11.17□□□□□ -0.62
PRKD3-208ENST00000475912 Q3C1V9 767 aa11.16□□□□□ -0.62
PRKD3-208ENST00000475912 SALL2Q9Y467 1007 aaPredicted RBP11.16□□□□□ -0.62
PRKD3-208ENST00000475912 FAM160A2Q8N612 972 aaPredicted RBP11.15□□□□□ -0.62
PRKD3-208ENST00000475912 NDUFV2P19404 249 aa11.14□□□□□ -0.63
PRKD3-208ENST00000475912 PRKD2Q9BZL6 878 aa11.14□□□□□ -0.63
PRKD3-208ENST00000475912 PRDM9Q9NQV7 894 aa11.14□□□□□ -0.63
PRKD3-208ENST00000475912 MOXD2PA6NHM9 499 aa11.13□□□□□ -0.63
PRKD3-208ENST00000475912 TPRNQ4KMQ1 711 aa11.13□□□□□ -0.63
PRKD3-208ENST00000475912 TBC1D2Q9BYX2 928 aa11.13□□□□□ -0.63
PRKD3-208ENST00000475912 FDX1P10109 184 aa11.12□□□□□ -0.63
PRKD3-208ENST00000475912 ANKLE1Q8NAG6 615 aa11.12□□□□□ -0.63
PRKD3-208ENST00000475912 GPBP1L1Q9HC44 474 aaPredicted RBP11.12□□□□□ -0.63
PRKD3-208ENST00000475912 PCDHGC3Q9UN70 934 aa11.12□□□□□ -0.63
PRKD3-208ENST00000475912 MSS51Q4VC12 460 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms