RNA–Protein interactions for RNA: ENST00000474996.6

COL2A1-205, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 3

Gene COL2A1, Length 760 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-205ENST00000474996 RBM33Q96EV2 1170 aaKnown RBP22.15■■□□□ 1.14
COL2A1-205ENST00000474996 NWD1Q149M9 1564 aa22.14■■□□□ 1.13
COL2A1-205ENST00000474996 PROSER2Q86WR7 435 aaPredicted RBP22.14■■□□□ 1.13
COL2A1-205ENST00000474996 ZFYVE9O95405 1425 aa22.14■■□□□ 1.13
COL2A1-205ENST00000474996 TMEM131LA2VDJ0 1609 aa22.13■■□□□ 1.13
COL2A1-205ENST00000474996 FAM135BQ49AJ0 1406 aa22.12■■□□□ 1.13
COL2A1-205ENST00000474996 E9PCH4 1651 aa22.11■■□□□ 1.13
COL2A1-205ENST00000474996 NKTRP30414 1462 aaKnown RBP22.11■■□□□ 1.13
COL2A1-205ENST00000474996 RIMS2Q9UQ26 1411 aa22.11■■□□□ 1.13
COL2A1-205ENST00000474996 ROCK1Q13464 1354 aa22.11■■□□□ 1.13
COL2A1-205ENST00000474996 PLEKHG1Q9ULL1 1385 aa22.1■■□□□ 1.13
COL2A1-205ENST00000474996 PPP1R15AO75807 674 aaPredicted RBP22.09■■□□□ 1.13
COL2A1-205ENST00000474996 IQGAP3Q86VI3 1631 aa22.09■■□□□ 1.13
COL2A1-205ENST00000474996 ROBO1Q9Y6N7 1651 aa22.08■■□□□ 1.13
COL2A1-205ENST00000474996 CHGAP10645 457 aaKnown RBP22.08■■□□□ 1.13
COL2A1-205ENST00000474996 CHD2O14647 1828 aaKnown RBP22.08■■□□□ 1.12
COL2A1-205ENST00000474996 HDGFP51858 240 aaKnown RBP22.07■■□□□ 1.12
COL2A1-205ENST00000474996 ITGAEP38570 1179 aa22.06■■□□□ 1.12
COL2A1-205ENST00000474996 MSH6P52701 1360 aa22.04■■□□□ 1.12
COL2A1-205ENST00000474996 PPARGC1BQ86YN6 1023 aaKnown RBP22.04■■□□□ 1.12
COL2A1-205ENST00000474996 NUP155O75694 1391 aa22.03■■□□□ 1.12
COL2A1-205ENST00000474996 NUTM2DQ5VT03 806 aaPredicted RBP22.03■■□□□ 1.12
COL2A1-205ENST00000474996 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.02■■□□□ 1.12
COL2A1-205ENST00000474996 RGS17Q9UGC6 210 aaPredicted RBP22.01■■□□□ 1.11
COL2A1-205ENST00000474996 TBX22Q9Y458 520 aa22.01■■□□□ 1.11
COL2A1-205ENST00000474996 ADAMTS13Q76LX8 1427 aa21.99■■□□□ 1.11
COL2A1-205ENST00000474996 SLAIN2Q9P270 581 aa21.98■■□□□ 1.11
COL2A1-205ENST00000474996 DIP2AQ14689 1571 aa21.97■■□□□ 1.11
COL2A1-205ENST00000474996 PHLPP1O60346 1717 aa21.96■■□□□ 1.11
COL2A1-205ENST00000474996 SPHKAPQ2M3C7 1700 aa21.93■■□□□ 1.1
COL2A1-205ENST00000474996 C14orf37Q86TY3 774 aa21.93■■□□□ 1.1
COL2A1-205ENST00000474996 NCOA3Q9Y6Q9 1424 aa21.93■■□□□ 1.1
COL2A1-205ENST00000474996 PIK3R4Q99570 1358 aa21.92■■□□□ 1.1
COL2A1-205ENST00000474996 TRPM2O94759 1503 aa21.91■■□□□ 1.1
COL2A1-205ENST00000474996 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.91■■□□□ 1.1
COL2A1-205ENST00000474996 PTPRUQ92729 1446 aa21.89■■□□□ 1.09
COL2A1-205ENST00000474996 POTEAQ6S8J7 498 aa21.88■■□□□ 1.09
COL2A1-205ENST00000474996 AMOTL2Q9Y2J4 779 aa21.88■■□□□ 1.09
COL2A1-205ENST00000474996 COL16A1Q07092 1604 aaPredicted RBP21.88■■□□□ 1.09
COL2A1-205ENST00000474996 NRXN3Q9Y4C0 1643 aa21.88■■□□□ 1.09
COL2A1-205ENST00000474996 JCADQ9P266 1359 aa21.87■■□□□ 1.09
COL2A1-205ENST00000474996 C19orf44Q9H6X5 657 aa21.87■■□□□ 1.09
COL2A1-205ENST00000474996 CADPS2Q86UW7 1296 aa21.86■■□□□ 1.09
COL2A1-205ENST00000474996 ATF3P18847 181 aa21.85■■□□□ 1.09
COL2A1-205ENST00000474996 ZNF326Q5BKZ1 582 aaKnown RBP21.85■■□□□ 1.09
COL2A1-205ENST00000474996 SETBP1Q9Y6X0 1596 aa21.85■■□□□ 1.09
COL2A1-205ENST00000474996 RRBP1Q9P2E9 1410 aaKnown RBP21.83■■□□□ 1.09
COL2A1-205ENST00000474996 CLTCL1P53675 1640 aa21.83■■□□□ 1.08
COL2A1-205ENST00000474996 XRN1Q8IZH2 1706 aaKnown RBP21.83■■□□□ 1.08
COL2A1-205ENST00000474996 AHDC1Q5TGY3 1603 aaPredicted RBP21.81■■□□□ 1.08
COL2A1-205ENST00000474996 NAIPQ13075 1403 aa21.8■■□□□ 1.08
COL2A1-205ENST00000474996 METP08581 1390 aa21.79■■□□□ 1.08
COL2A1-205ENST00000474996 NEXMIFQ5QGS0 1516 aa21.79■■□□□ 1.08
COL2A1-205ENST00000474996 KIF1BO60333 1816 aa21.78■■□□□ 1.08
COL2A1-205ENST00000474996 LRP6O75581 1613 aa21.77■■□□□ 1.08
COL2A1-205ENST00000474996 BRINP3Q76B58 766 aa21.77■■□□□ 1.08
COL2A1-205ENST00000474996 DCCP43146 1447 aa21.77■■□□□ 1.08
COL2A1-205ENST00000474996 SPATA31A6Q5VVP1 1343 aa21.77■■□□□ 1.07
COL2A1-205ENST00000474996 SHPRHQ149N8 1683 aa21.75■■□□□ 1.07
COL2A1-205ENST00000474996 MST1RQ04912 1400 aa21.72■■□□□ 1.07
COL2A1-205ENST00000474996 SETD1AO15047 1707 aaKnown RBP21.72■■□□□ 1.07
COL2A1-205ENST00000474996 ASXL1Q8IXJ9 1541 aa21.72■■□□□ 1.07
COL2A1-205ENST00000474996 MEX3CQ5U5Q3 659 aaKnown RBP21.72■■□□□ 1.07
COL2A1-205ENST00000474996 TRIM52Q96A61 297 aa21.72■■□□□ 1.07
COL2A1-205ENST00000474996 NALCNQ8IZF0 1738 aa21.7■■□□□ 1.06
COL2A1-205ENST00000474996 HFM1A2PYH4 1435 aa21.7■■□□□ 1.06
COL2A1-205ENST00000474996 ADGRL3Q9HAR2 1447 aa21.7■■□□□ 1.06
COL2A1-205ENST00000474996 NHSL1Q5SYE7 1610 aa21.69■■□□□ 1.06
COL2A1-205ENST00000474996 SETD5Q9C0A6 1442 aa21.65■■□□□ 1.06
COL2A1-205ENST00000474996 NUTM2BA6NNL0 878 aaPredicted RBP21.65■■□□□ 1.06
COL2A1-205ENST00000474996 NUTM2EB1AL46 878 aaPredicted RBP21.65■■□□□ 1.06
COL2A1-205ENST00000474996 VGFO15240 615 aaPredicted RBP21.65■■□□□ 1.06
COL2A1-205ENST00000474996 ZNF772Q68DY9 489 aaPredicted RBP21.65■■□□□ 1.06
COL2A1-205ENST00000474996 NUTM2AQ8IVF1 878 aaPredicted RBP21.65■■□□□ 1.06
COL2A1-205ENST00000474996 SLC4A1APQ9BWU0 796 aaKnown RBP21.65■■□□□ 1.06
COL2A1-205ENST00000474996 DDX17Q92841 729 aaKnown RBP21.63■■□□□ 1.05
COL2A1-205ENST00000474996 PPLO60437 1756 aa21.62■■□□□ 1.05
COL2A1-205ENST00000474996 PTCH1Q13635 1447 aa21.62■■□□□ 1.05
COL2A1-205ENST00000474996 LRRC59Q96AG4 307 aaKnown RBP21.61■■□□□ 1.05
COL2A1-205ENST00000474996 ROBO2Q9HCK4 1378 aa21.61■■□□□ 1.05
COL2A1-205ENST00000474996 RPGRIP1LQ68CZ1 1315 aa21.6■■□□□ 1.05
COL2A1-205ENST00000474996 FOXD1Q16676 465 aa21.59■■□□□ 1.05
COL2A1-205ENST00000474996 C1orf167Q5SNV9 1468 aa21.58■■□□□ 1.05
COL2A1-205ENST00000474996 PNPLA6Q8IY17 1366 aa21.57■■□□□ 1.04
COL2A1-205ENST00000474996 AFF2P51816 1311 aa21.56■■□□□ 1.04
COL2A1-205ENST00000474996 PRAG1Q86YV5 1406 aa21.56■■□□□ 1.04
COL2A1-205ENST00000474996 RXRBP28702 533 aa21.55■■□□□ 1.04
COL2A1-205ENST00000474996 LAMC1P11047 1609 aa21.54■■□□□ 1.04
COL2A1-205ENST00000474996 ORAI2Q96SN7 254 aa21.53■■□□□ 1.04
COL2A1-205ENST00000474996 C8orf37Q96NL8 207 aa21.52■■□□□ 1.04
COL2A1-205ENST00000474996 CCDC144AA2RUR9 1427 aa21.51■■□□□ 1.03
COL2A1-205ENST00000474996 ADGRF5Q8IZF2 1346 aa21.5■■□□□ 1.03
COL2A1-205ENST00000474996 RGL3Q3MIN7 710 aa21.49■■□□□ 1.03
COL2A1-205ENST00000474996 UPF1Q92900 1129 aaKnown RBP eCLIP21.49■■□□□ 1.03
COL2A1-205ENST00000474996 CDK12Q9NYV4 1490 aaPredicted RBP21.49■■□□□ 1.03
COL2A1-205ENST00000474996 SOS2Q07890 1332 aaPredicted RBP21.49■■□□□ 1.03
COL2A1-205ENST00000474996 MPHOSPH9Q99550 1183 aa21.48■■□□□ 1.03
COL2A1-205ENST00000474996 IFT172Q9UG01 1749 aa21.48■■□□□ 1.03
COL2A1-205ENST00000474996 SPATA31E1Q6ZUB1 1445 aa21.47■■□□□ 1.03
COL2A1-205ENST00000474996 ADAMTS2O95450 1211 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms