RNA–Protein interactions for RNA: ENST00000474557.1

HMGN1P10-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 10, humanhuman

BASIC

Gene HMGN1P10, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P10-201ENST00000474557 ST8SIA5O15466 376 aa9.98□□□□□ -0.81
HMGN1P10-201ENST00000474557 CADPS2Q86UW7 1296 aa9.98□□□□□ -0.81
HMGN1P10-201ENST00000474557 C3orf80F5H4A9 247 aa9.97□□□□□ -0.81
HMGN1P10-201ENST00000474557 GDF9O60383 454 aa9.97□□□□□ -0.81
HMGN1P10-201ENST00000474557 LMOD2Q6P5Q4 547 aa9.95□□□□□ -0.82
HMGN1P10-201ENST00000474557 EMID1Q96A84 441 aaPredicted RBP9.95□□□□□ -0.82
HMGN1P10-201ENST00000474557 C11orf95C9JLR9 678 aaPredicted RBP9.94□□□□□ -0.82
HMGN1P10-201ENST00000474557 WIPF1O43516 503 aa9.94□□□□□ -0.82
HMGN1P10-201ENST00000474557 BLOC1S3Q6QNY0 202 aa9.94□□□□□ -0.82
HMGN1P10-201ENST00000474557 LIAT1Q6ZQX7 453 aa9.94□□□□□ -0.82
HMGN1P10-201ENST00000474557 GRXCR2A6NFK2 248 aa9.92□□□□□ -0.82
HMGN1P10-201ENST00000474557 CRIPAKQ8N1N5 446 aa9.92□□□□□ -0.82
HMGN1P10-201ENST00000474557 PPEF1O14829 653 aaPredicted RBP9.9□□□□□ -0.82
HMGN1P10-201ENST00000474557 S1PR4O95977 384 aa9.9□□□□□ -0.82
HMGN1P10-201ENST00000474557 FAM181BA6NEQ2 426 aa9.89□□□□□ -0.83
HMGN1P10-201ENST00000474557 AXIN1O15169 862 aa9.89□□□□□ -0.83
HMGN1P10-201ENST00000474557 KMT5BQ4FZB7 885 aa9.89□□□□□ -0.83
HMGN1P10-201ENST00000474557 TLL1O43897 1013 aa9.88□□□□□ -0.83
HMGN1P10-201ENST00000474557 CTC1Q2NKJ3 1217 aa9.88□□□□□ -0.83
HMGN1P10-201ENST00000474557 FOXC1Q12948 553 aa9.87□□□□□ -0.83
HMGN1P10-201ENST00000474557 NFX1Q12986 1120 aaKnown RBP9.87□□□□□ -0.83
HMGN1P10-201ENST00000474557 GMPR2Q9P2T1 348 aaKnown RBP9.86□□□□□ -0.83
HMGN1P10-201ENST00000474557 ADH1BP00325 375 aa9.85□□□□□ -0.83
HMGN1P10-201ENST00000474557 TTC13Q8NBP0 860 aa9.85□□□□□ -0.83
HMGN1P10-201ENST00000474557 CDHR5Q9HBB8 845 aa9.85□□□□□ -0.83
HMGN1P10-201ENST00000474557 AVPP01185 164 aa9.84□□□□□ -0.83
HMGN1P10-201ENST00000474557 PADI6Q6TGC4 694 aa9.84□□□□□ -0.83
HMGN1P10-201ENST00000474557 SLC6A16Q9GZN6 736 aa9.84□□□□□ -0.83
HMGN1P10-201ENST00000474557 NR1I2O75469 434 aa9.83□□□□□ -0.84
HMGN1P10-201ENST00000474557 PRIM1P49642 420 aaKnown RBP9.83□□□□□ -0.84
HMGN1P10-201ENST00000474557 CYP4X1Q8N118 509 aa9.83□□□□□ -0.84
HMGN1P10-201ENST00000474557 ACTN4O43707 911 aaKnown RBP9.82□□□□□ -0.84
HMGN1P10-201ENST00000474557 EYA1Q99502 592 aa9.81□□□□□ -0.84
HMGN1P10-201ENST00000474557 PKD2L1Q9P0L9 805 aa9.81□□□□□ -0.84
HMGN1P10-201ENST00000474557 DACH1Q9UI36 760 aa9.81□□□□□ -0.84
HMGN1P10-201ENST00000474557 CD2BP2O95400 341 aaKnown RBP9.8□□□□□ -0.84
HMGN1P10-201ENST00000474557 DCAF8L2P0C7V8 631 aa9.8□□□□□ -0.84
HMGN1P10-201ENST00000474557 OSBPP22059 807 aa9.8□□□□□ -0.84
HMGN1P10-201ENST00000474557 LOC100996750A0A140TA64 210 aa9.79□□□□□ -0.84
HMGN1P10-201ENST00000474557 DNAJB2P25686 324 aa9.79□□□□□ -0.84
HMGN1P10-201ENST00000474557 SMCPP49901 116 aaPredicted RBP9.79□□□□□ -0.84
HMGN1P10-201ENST00000474557 KRTAP4-6Q9BYQ5 205 aa9.79□□□□□ -0.84
HMGN1P10-201ENST00000474557 RPIAP49247 311 aa9.78□□□□□ -0.84
HMGN1P10-201ENST00000474557 TERTO14746 1132 aaKnown RBP9.77□□□□□ -0.85
HMGN1P10-201ENST00000474557 CFHP08603 1231 aa9.76□□□□□ -0.85
HMGN1P10-201ENST00000474557 E2F4Q16254 413 aa9.76□□□□□ -0.85
HMGN1P10-201ENST00000474557 TOR4AQ9NXH8 423 aa9.76□□□□□ -0.85
HMGN1P10-201ENST00000474557 PLA2G2CQ5R387 149 aa9.75□□□□□ -0.85
HMGN1P10-201ENST00000474557 RBM46Q8TBY0 533 aaKnown RBP9.75□□□□□ -0.85
HMGN1P10-201ENST00000474557 SENP2Q9HC62 589 aa9.75□□□□□ -0.85
HMGN1P10-201ENST00000474557 TTC24A2A3L6 582 aaPredicted RBP9.74□□□□□ -0.85
HMGN1P10-201ENST00000474557 ARIH1Q9Y4X5 557 aaPredicted RBP9.74□□□□□ -0.85
HMGN1P10-201ENST00000474557 NPDC1Q9NQX5 325 aaPredicted RBP9.73□□□□□ -0.85
HMGN1P10-201ENST00000474557 SLC16A10Q8TF71 515 aa9.72□□□□□ -0.85
HMGN1P10-201ENST00000474557 SPSB2Q99619 263 aa9.71□□□□□ -0.86
HMGN1P10-201ENST00000474557 TMEM134Q9H6X4 195 aa9.71□□□□□ -0.86
HMGN1P10-201ENST00000474557 RSPH4AQ5TD94 716 aa9.69□□□□□ -0.86
HMGN1P10-201ENST00000474557 SCUBE3Q8IX30 993 aa9.69□□□□□ -0.86
HMGN1P10-201ENST00000474557 KIFC2Q96AC6 838 aa9.69□□□□□ -0.86
HMGN1P10-201ENST00000474557 ATP13A2Q9NQ11 1180 aa9.69□□□□□ -0.86
HMGN1P10-201ENST00000474557 WDR70Q9NW82 654 aa9.69□□□□□ -0.86
HMGN1P10-201ENST00000474557 TRIM47Q96LD4 638 aa9.68□□□□□ -0.86
HMGN1P10-201ENST00000474557 ZBTB24O43167 697 aaPredicted RBP9.66□□□□□ -0.86
HMGN1P10-201ENST00000474557 SNRPBP14678 240 aaKnown RBP9.66□□□□□ -0.86
HMGN1P10-201ENST00000474557 ZSCAN1Q8NBB4 408 aa9.65□□□□□ -0.86
HMGN1P10-201ENST00000474557 FCF1Q9Y324 198 aaKnown RBP9.64□□□□□ -0.87
HMGN1P10-201ENST00000474557 RCCD1A6NED2 376 aa9.63□□□□□ -0.87
HMGN1P10-201ENST00000474557 SNIP1Q8TAD8 396 aaKnown RBP9.62□□□□□ -0.87
HMGN1P10-201ENST00000474557 LCE2CQ5TA81 110 aa9.6□□□□□ -0.87
HMGN1P10-201ENST00000474557 SLC10A3P09131 477 aa9.59□□□□□ -0.87
HMGN1P10-201ENST00000474557 IRF7Q92985 503 aa9.59□□□□□ -0.87
HMGN1P10-201ENST00000474557 ADGRG1Q9Y653 693 aa9.59□□□□□ -0.87
HMGN1P10-201ENST00000474557 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.58□□□□□ -0.88
HMGN1P10-201ENST00000474557 WNT7AO00755 349 aa9.58□□□□□ -0.88
HMGN1P10-201ENST00000474557 SUZ12Q15022 739 aaKnown RBP9.58□□□□□ -0.88
HMGN1P10-201ENST00000474557 PUS10Q3MIT2 529 aaKnown RBP9.58□□□□□ -0.88
HMGN1P10-201ENST00000474557 SMPD1P17405 629 aa9.57□□□□□ -0.88
HMGN1P10-201ENST00000474557 NXF1Q9UBU9 619 aaKnown RBP9.57□□□□□ -0.88
HMGN1P10-201ENST00000474557 NPAS3Q8IXF0 933 aa9.56□□□□□ -0.88
HMGN1P10-201ENST00000474557 FMNL1O95466 1100 aaPredicted RBP9.55□□□□□ -0.88
HMGN1P10-201ENST00000474557 PTGDRQ13258 359 aa9.55□□□□□ -0.88
HMGN1P10-201ENST00000474557 GMPRP36959 345 aa9.54□□□□□ -0.88
HMGN1P10-201ENST00000474557 REPIN1Q9BWE0 567 aaKnown RBP9.54□□□□□ -0.88
HMGN1P10-201ENST00000474557 OATP04181 439 aa9.5□□□□□ -0.89
HMGN1P10-201ENST00000474557 J3QL48 77 aa9.49□□□□□ -0.89
HMGN1P10-201ENST00000474557 BBXQ8WY36 941 aaPredicted RBP9.49□□□□□ -0.89
HMGN1P10-201ENST00000474557 MRGPRX2Q96LB1 330 aa9.49□□□□□ -0.89
HMGN1P10-201ENST00000474557 ATP6V1AP38606 617 aa9.48□□□□□ -0.89
HMGN1P10-201ENST00000474557 MORN1Q5T089 497 aa9.48□□□□□ -0.89
HMGN1P10-201ENST00000474557 HPS1Q92902 700 aa9.48□□□□□ -0.89
HMGN1P10-201ENST00000474557 THAP11Q96EK4 314 aa9.48□□□□□ -0.89
HMGN1P10-201ENST00000474557 SALL2Q9Y467 1007 aaPredicted RBP9.48□□□□□ -0.89
HMGN1P10-201ENST00000474557 TRIM32Q13049 653 aa9.47□□□□□ -0.89
HMGN1P10-201ENST00000474557 FAM161AQ3B820 660 aa9.47□□□□□ -0.89
HMGN1P10-201ENST00000474557 FAM160A2Q8N612 972 aaPredicted RBP9.47□□□□□ -0.89
HMGN1P10-201ENST00000474557 LORP23490 312 aaPredicted RBP9.46□□□□□ -0.9
HMGN1P10-201ENST00000474557 RDH13Q8NBN7 331 aa9.46□□□□□ -0.9
HMGN1P10-201ENST00000474557 NUTM2FA1L443 756 aa9.45□□□□□ -0.9
HMGN1P10-201ENST00000474557 SPRYD3Q8NCJ5 442 aa9.45□□□□□ -0.9
HMGN1P10-201ENST00000474557 MSS51Q4VC12 460 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms